RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 FYCO1Q9BQS8 1478 aa15.49■□□□□ 0.07
NEIL1-201ENST00000355059 KIF3BO15066 747 aa15.49■□□□□ 0.07
NEIL1-201ENST00000355059 SPAG9O60271 1321 aaKnown RBP15.48■□□□□ 0.07
NEIL1-201ENST00000355059 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
NEIL1-201ENST00000355059 PBRM1Q86U86 1689 aa15.48■□□□□ 0.07
NEIL1-201ENST00000355059 UACAQ9BZF9 1416 aa15.47■□□□□ 0.07
NEIL1-201ENST00000355059 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
NEIL1-201ENST00000355059 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
NEIL1-201ENST00000355059 PKD2Q13563 968 aa15.46■□□□□ 0.06
NEIL1-201ENST00000355059 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
NEIL1-201ENST00000355059 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
NEIL1-201ENST00000355059 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
NEIL1-201ENST00000355059 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
NEIL1-201ENST00000355059 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
NEIL1-201ENST00000355059 NUP155O75694 1391 aa15.42■□□□□ 0.06
NEIL1-201ENST00000355059 TIAM1Q13009 1591 aa15.42■□□□□ 0.06
NEIL1-201ENST00000355059 DHX57Q6P158 1386 aaKnown RBP15.42■□□□□ 0.06
NEIL1-201ENST00000355059 RAPGEF3O95398 923 aa15.41■□□□□ 0.06
NEIL1-201ENST00000355059 MPHOSPH9Q99550 1183 aa15.4■□□□□ 0.06
NEIL1-201ENST00000355059 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
NEIL1-201ENST00000355059 ANKRD30AQ9BXX3 1397 aa15.4■□□□□ 0.06
NEIL1-201ENST00000355059 NUP160Q12769 1436 aa15.39■□□□□ 0.05
NEIL1-201ENST00000355059 ARHGEF11O15085 1522 aa15.39■□□□□ 0.05
NEIL1-201ENST00000355059 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
NEIL1-201ENST00000355059 HECW1Q76N89 1606 aa15.36■□□□□ 0.05
NEIL1-201ENST00000355059 CTTNBP2Q8WZ74 1663 aa15.36■□□□□ 0.05
NEIL1-201ENST00000355059 DISP1Q96F81 1524 aa15.35■□□□□ 0.05
NEIL1-201ENST00000355059 ARHGAP5Q13017 1502 aa15.34■□□□□ 0.05
NEIL1-201ENST00000355059 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
NEIL1-201ENST00000355059 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.05
NEIL1-201ENST00000355059 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
NEIL1-201ENST00000355059 ATP10BO94823 1461 aa15.32■□□□□ 0.04
NEIL1-201ENST00000355059 NUP153P49790 1475 aaKnown RBP15.32■□□□□ 0.04
NEIL1-201ENST00000355059 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
NEIL1-201ENST00000355059 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
NEIL1-201ENST00000355059 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
NEIL1-201ENST00000355059 UGGT2Q9NYU1 1516 aa15.3■□□□□ 0.04
NEIL1-201ENST00000355059 WASHC2CQ9Y4E1 1318 aa15.29■□□□□ 0.04
NEIL1-201ENST00000355059 PPP1R15AO75807 674 aaPredicted RBP15.29■□□□□ 0.04
NEIL1-201ENST00000355059 KIF15Q9NS87 1388 aa15.29■□□□□ 0.04
NEIL1-201ENST00000355059 RSPH4AQ5TD94 716 aa15.29■□□□□ 0.04
NEIL1-201ENST00000355059 EHBP1L1Q8N3D4 1523 aa15.29■□□□□ 0.04
NEIL1-201ENST00000355059 SCAPERQ9BY12 1400 aa15.27■□□□□ 0.04
NEIL1-201ENST00000355059 TSHZ2Q9NRE2 1034 aa15.27■□□□□ 0.03
NEIL1-201ENST00000355059 CHD1O14646 1710 aa15.27■□□□□ 0.03
NEIL1-201ENST00000355059 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
NEIL1-201ENST00000355059 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
NEIL1-201ENST00000355059 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
NEIL1-201ENST00000355059 KANK1Q14678 1352 aa15.25■□□□□ 0.03
NEIL1-201ENST00000355059 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
NEIL1-201ENST00000355059 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
NEIL1-201ENST00000355059 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
NEIL1-201ENST00000355059 CD109Q6YHK3 1445 aa15.22■□□□□ 0.03
NEIL1-201ENST00000355059 SUPT6HQ7KZ85 1726 aaKnown RBP15.22■□□□□ 0.03
NEIL1-201ENST00000355059 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
NEIL1-201ENST00000355059 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEIL1-201ENST00000355059 ASXL2Q76L83 1435 aa15.21■□□□□ 0.02
NEIL1-201ENST00000355059 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
NEIL1-201ENST00000355059 EIF4G2P78344 907 aaKnown RBP eCLIP15.2■□□□□ 0.02
NEIL1-201ENST00000355059 UBE2Q2Q8WVN8 375 aa15.2■□□□□ 0.02
NEIL1-201ENST00000355059 C9orf84Q5VXU9 1444 aa15.18■□□□□ 0.02
NEIL1-201ENST00000355059 SENP3-EIF4A1A0A087X0R7 540 aa15.16■□□□□ 0.02
NEIL1-201ENST00000355059 DAPK1P53355 1430 aa15.16■□□□□ 0.02
NEIL1-201ENST00000355059 MIA2Q96PC5 1412 aa15.16■□□□□ 0.02
NEIL1-201ENST00000355059 STK26Q9P289 416 aa15.16■□□□□ 0.02
NEIL1-201ENST00000355059 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.15■□□□□ 0.02
NEIL1-201ENST00000355059 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
NEIL1-201ENST00000355059 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
NEIL1-201ENST00000355059 DAXXQ9UER7 740 aaPredicted RBP15.14■□□□□ 0.01
NEIL1-201ENST00000355059 SAMD9Q5K651 1589 aa15.14■□□□□ 0.01
NEIL1-201ENST00000355059 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
NEIL1-201ENST00000355059 ABCC5O15440 1437 aa15.13■□□□□ 0.01
NEIL1-201ENST00000355059 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
NEIL1-201ENST00000355059 KIF14Q15058 1648 aa15.12■□□□□ 0.01
NEIL1-201ENST00000355059 TMC1Q8TDI8 760 aa15.11■□□□□ 0.01
NEIL1-201ENST00000355059 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
NEIL1-201ENST00000355059 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
NEIL1-201ENST00000355059 NAIPQ13075 1403 aa15.1■□□□□ 0.01
NEIL1-201ENST00000355059 MAP3K1Q13233 1512 aa15.1■□□□□ 0.01
NEIL1-201ENST00000355059 FANCAO15360 1455 aa15.09■□□□□ 0.01
NEIL1-201ENST00000355059 ADGRL1O94910 1474 aa15.09■□□□□ 0.01
NEIL1-201ENST00000355059 ABCC2Q92887 1545 aa15.08■□□□□ 0
NEIL1-201ENST00000355059 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
NEIL1-201ENST00000355059 C14orf37Q86TY3 774 aa15.08■□□□□ 0
NEIL1-201ENST00000355059 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
NEIL1-201ENST00000355059 WDR7Q9Y4E6 1490 aa15.06■□□□□ 0
NEIL1-201ENST00000355059 CCER2I3L3R5 266 aa15.06■□□□□ 0
NEIL1-201ENST00000355059 PODXL2Q9NZ53 605 aa15.05■□□□□ 0
NEIL1-201ENST00000355059 HFM1A2PYH4 1435 aa15.05■□□□□ 0
NEIL1-201ENST00000355059 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
NEIL1-201ENST00000355059 POGKQ9P215 609 aa15.04■□□□□ -0
NEIL1-201ENST00000355059 TRAPPC8Q9Y2L5 1435 aa15.04■□□□□ -0
NEIL1-201ENST00000355059 CCDC141Q6ZP82 1450 aa15.04■□□□□ -0
NEIL1-201ENST00000355059 RBM19Q9Y4C8 960 aaKnown RBP15.03■□□□□ -0
NEIL1-201ENST00000355059 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
NEIL1-201ENST00000355059 NCOA1Q15788 1441 aa15.02■□□□□ -0
NEIL1-201ENST00000355059 AKNAQ7Z591 1439 aa15.02■□□□□ -0
NEIL1-201ENST00000355059 PLCH2O75038 1416 aa15.02□□□□□ -0.01
NEIL1-201ENST00000355059 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
NEIL1-201ENST00000355059 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms