RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
TRPM3-201ENST00000354500 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
TRPM3-201ENST00000354500 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
TRPM3-201ENST00000354500 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
TRPM3-201ENST00000354500 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
TRPM3-201ENST00000354500 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
TRPM3-201ENST00000354500 CCDC146Q8IYE0 955 aa15.87■□□□□ 0.13
TRPM3-201ENST00000354500 SPRYD3Q8NCJ5 442 aa15.87■□□□□ 0.13
TRPM3-201ENST00000354500 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
TRPM3-201ENST00000354500 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
TRPM3-201ENST00000354500 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
TRPM3-201ENST00000354500 KIF21BO75037 1637 aa15.86■□□□□ 0.13
TRPM3-201ENST00000354500 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
TRPM3-201ENST00000354500 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
TRPM3-201ENST00000354500 MORC1Q86VD1 984 aa15.85■□□□□ 0.13
TRPM3-201ENST00000354500 PLIN1O60240 522 aa15.85■□□□□ 0.13
TRPM3-201ENST00000354500 KTN1Q86UP2 1357 aaKnown RBP15.84■□□□□ 0.13
TRPM3-201ENST00000354500 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
TRPM3-201ENST00000354500 KIF3BO15066 747 aa15.84■□□□□ 0.13
TRPM3-201ENST00000354500 BECN1Q14457 450 aa15.84■□□□□ 0.13
TRPM3-201ENST00000354500 ANKRD30AQ9BXX3 1397 aa15.83■□□□□ 0.13
TRPM3-201ENST00000354500 NUDCQ9Y266 331 aa15.83■□□□□ 0.13
TRPM3-201ENST00000354500 DEKP35659 375 aaKnown RBP15.83■□□□□ 0.12
TRPM3-201ENST00000354500 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
TRPM3-201ENST00000354500 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
TRPM3-201ENST00000354500 CLUAP1Q96AJ1 413 aa15.81■□□□□ 0.12
TRPM3-201ENST00000354500 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
TRPM3-201ENST00000354500 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
TRPM3-201ENST00000354500 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
TRPM3-201ENST00000354500 HAP1P54257 671 aaPredicted RBP15.79■□□□□ 0.12
TRPM3-201ENST00000354500 U2AF1L5P0DN76 240 aaPredicted RBP15.78■□□□□ 0.12
TRPM3-201ENST00000354500 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRPM3-201ENST00000354500 NCLP19338 710 aaKnown RBP15.78■□□□□ 0.12
TRPM3-201ENST00000354500 PANK3Q9H999 370 aa15.78■□□□□ 0.12
TRPM3-201ENST00000354500 RALBP1Q15311 655 aa15.77■□□□□ 0.12
TRPM3-201ENST00000354500 NLRP13Q86W25 1043 aa15.77■□□□□ 0.12
TRPM3-201ENST00000354500 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
TRPM3-201ENST00000354500 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
TRPM3-201ENST00000354500 CYB5RLQ6IPT4 315 aa15.75■□□□□ 0.11
TRPM3-201ENST00000354500 APBB1O00213 710 aa15.75■□□□□ 0.11
TRPM3-201ENST00000354500 EXOC6Q8TAG9 804 aa15.75■□□□□ 0.11
TRPM3-201ENST00000354500 TRAK1Q9UPV9 953 aa15.74■□□□□ 0.11
TRPM3-201ENST00000354500 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
TRPM3-201ENST00000354500 SLKQ9H2G2 1235 aaPredicted RBP15.74■□□□□ 0.11
TRPM3-201ENST00000354500 BCL2L13Q9BXK5 485 aa15.73■□□□□ 0.11
TRPM3-201ENST00000354500 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
TRPM3-201ENST00000354500 USP47Q96K76 1375 aa15.72■□□□□ 0.11
TRPM3-201ENST00000354500 FGD6Q6ZV73 1430 aa15.72■□□□□ 0.11
TRPM3-201ENST00000354500 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
TRPM3-201ENST00000354500 KIF7Q2M1P5 1343 aa15.71■□□□□ 0.11
TRPM3-201ENST00000354500 KANK1Q14678 1352 aa15.71■□□□□ 0.11
TRPM3-201ENST00000354500 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
TRPM3-201ENST00000354500 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
TRPM3-201ENST00000354500 NUTM2FA1L443 756 aa15.69■□□□□ 0.1
TRPM3-201ENST00000354500 ERICH6BQ5W0A0 696 aa15.69■□□□□ 0.1
TRPM3-201ENST00000354500 SPAG9O60271 1321 aaKnown RBP15.69■□□□□ 0.1
TRPM3-201ENST00000354500 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRPM3-201ENST00000354500 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
TRPM3-201ENST00000354500 ZBED9Q6R2W3 1325 aa15.65■□□□□ 0.1
TRPM3-201ENST00000354500 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
TRPM3-201ENST00000354500 TCERG1O14776 1098 aaKnown RBP15.65■□□□□ 0.1
TRPM3-201ENST00000354500 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
TRPM3-201ENST00000354500 IPO9Q96P70 1041 aaKnown RBP15.64■□□□□ 0.1
TRPM3-201ENST00000354500 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.09
TRPM3-201ENST00000354500 GZF1Q9H116 711 aaPredicted RBP15.64■□□□□ 0.09
TRPM3-201ENST00000354500 TAOK2Q9UL54 1235 aa15.64■□□□□ 0.09
TRPM3-201ENST00000354500 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
TRPM3-201ENST00000354500 APAF1O14727 1248 aa15.64■□□□□ 0.09
TRPM3-201ENST00000354500 ITPRIPQ8IWB1 547 aa15.64■□□□□ 0.09
TRPM3-201ENST00000354500 CCDC7Q96M83 1385 aa15.63■□□□□ 0.09
TRPM3-201ENST00000354500 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
TRPM3-201ENST00000354500 CRBNQ96SW2 442 aa15.63■□□□□ 0.09
TRPM3-201ENST00000354500 MYOM3Q5VTT5 1437 aa15.62■□□□□ 0.09
TRPM3-201ENST00000354500 HSP90AB1P08238 724 aaKnown RBP15.62■□□□□ 0.09
TRPM3-201ENST00000354500 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
TRPM3-201ENST00000354500 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
TRPM3-201ENST00000354500 NESP48681 1621 aa15.61■□□□□ 0.09
TRPM3-201ENST00000354500 KIF15Q9NS87 1388 aa15.61■□□□□ 0.09
TRPM3-201ENST00000354500 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
TRPM3-201ENST00000354500 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
TRPM3-201ENST00000354500 PTPRGP23470 1445 aa15.61■□□□□ 0.09
TRPM3-201ENST00000354500 GOLGA6L22H0YM25 854 aa15.6■□□□□ 0.09
TRPM3-201ENST00000354500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRPM3-201ENST00000354500 PRXQ9BXM0 1461 aa15.6■□□□□ 0.09
TRPM3-201ENST00000354500 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
TRPM3-201ENST00000354500 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
TRPM3-201ENST00000354500 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
TRPM3-201ENST00000354500 PDE4AP27815 886 aa15.6■□□□□ 0.09
TRPM3-201ENST00000354500 CFTRP13569 1480 aa15.59■□□□□ 0.09
TRPM3-201ENST00000354500 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
TRPM3-201ENST00000354500 NCOA2Q15596 1464 aa15.58■□□□□ 0.09
TRPM3-201ENST00000354500 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
TRPM3-201ENST00000354500 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
TRPM3-201ENST00000354500 COG6Q9Y2V7 657 aa15.58■□□□□ 0.08
TRPM3-201ENST00000354500 MFAP1P55081 439 aaKnown RBP15.57■□□□□ 0.08
TRPM3-201ENST00000354500 PLCB2Q00722 1185 aa15.57■□□□□ 0.08
TRPM3-201ENST00000354500 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
TRPM3-201ENST00000354500 RSPH4AQ5TD94 716 aa15.56■□□□□ 0.08
TRPM3-201ENST00000354500 CENPJQ9HC77 1338 aaPredicted RBP15.56■□□□□ 0.08
TRPM3-201ENST00000354500 HDGFL2Q7Z4V5 671 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms