RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 RGS3P49796 1198 aa23.32■■□□□ 1.32
TCF4-201ENST00000354452 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
TCF4-201ENST00000354452 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
TCF4-201ENST00000354452 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
TCF4-201ENST00000354452 CARD11Q9BXL7 1154 aa23.28■■□□□ 1.32
TCF4-201ENST00000354452 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
TCF4-201ENST00000354452 MAP3K1Q13233 1512 aa23.27■■□□□ 1.32
TCF4-201ENST00000354452 CDCA7LQ96GN5 454 aa23.26■■□□□ 1.31
TCF4-201ENST00000354452 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
TCF4-201ENST00000354452 NCOA1Q15788 1441 aa23.25■■□□□ 1.31
TCF4-201ENST00000354452 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
TCF4-201ENST00000354452 CRBNQ96SW2 442 aa23.23■■□□□ 1.31
TCF4-201ENST00000354452 CC2D1BQ5T0F9 858 aaKnown RBP23.2■■□□□ 1.31
TCF4-201ENST00000354452 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.31
TCF4-201ENST00000354452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.3
TCF4-201ENST00000354452 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
TCF4-201ENST00000354452 FRAT2O75474 233 aaPredicted RBP23.18■■□□□ 1.3
TCF4-201ENST00000354452 MS4A1P11836 297 aa23.18■■□□□ 1.3
TCF4-201ENST00000354452 NCOA2Q15596 1464 aa23.18■■□□□ 1.3
TCF4-201ENST00000354452 USP47Q96K76 1375 aa23.17■■□□□ 1.3
TCF4-201ENST00000354452 CFTRP13569 1480 aa23.17■■□□□ 1.3
TCF4-201ENST00000354452 PTPN23Q9H3S7 1636 aa23.16■■□□□ 1.3
TCF4-201ENST00000354452 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
TCF4-201ENST00000354452 FYCO1Q9BQS8 1478 aa23.14■■□□□ 1.29
TCF4-201ENST00000354452 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
TCF4-201ENST00000354452 UBE2Q2Q8WVN8 375 aa23.12■■□□□ 1.29
TCF4-201ENST00000354452 RNF123Q5XPI4 1314 aa23.11■■□□□ 1.29
TCF4-201ENST00000354452 PKD2Q13563 968 aa23.11■■□□□ 1.29
TCF4-201ENST00000354452 SLKQ9H2G2 1235 aaPredicted RBP23.11■■□□□ 1.29
TCF4-201ENST00000354452 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
TCF4-201ENST00000354452 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
TCF4-201ENST00000354452 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.29
TCF4-201ENST00000354452 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
TCF4-201ENST00000354452 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
TCF4-201ENST00000354452 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
TCF4-201ENST00000354452 RALBP1Q15311 655 aa23.05■■□□□ 1.28
TCF4-201ENST00000354452 NAP1L5Q96NT1 182 aaPredicted RBP23.05■■□□□ 1.28
TCF4-201ENST00000354452 C20orf194Q5TEA3 1177 aa23.04■■□□□ 1.28
TCF4-201ENST00000354452 NLRP13Q86W25 1043 aa23.03■■□□□ 1.28
TCF4-201ENST00000354452 KIF15Q9NS87 1388 aa23.03■■□□□ 1.28
TCF4-201ENST00000354452 SPRYD3Q8NCJ5 442 aa23.02■■□□□ 1.28
TCF4-201ENST00000354452 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
TCF4-201ENST00000354452 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
TCF4-201ENST00000354452 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
TCF4-201ENST00000354452 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
TCF4-201ENST00000354452 PDE3BQ13370 1112 aa23■■□□□ 1.27
TCF4-201ENST00000354452 DHX29Q7Z478 1369 aaKnown RBP22.99■■□□□ 1.27
TCF4-201ENST00000354452 GZF1Q9H116 711 aaPredicted RBP22.99■■□□□ 1.27
TCF4-201ENST00000354452 GLIPR1L2Q4G1C9 344 aa22.98■■□□□ 1.27
TCF4-201ENST00000354452 ANKRD30BQ9BXX2 1392 aa22.98■■□□□ 1.27
TCF4-201ENST00000354452 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
TCF4-201ENST00000354452 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
TCF4-201ENST00000354452 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
TCF4-201ENST00000354452 ARID4BQ4LE39 1312 aaPredicted RBP22.96■■□□□ 1.27
TCF4-201ENST00000354452 CADPSQ9ULU8 1353 aa22.96■■□□□ 1.27
TCF4-201ENST00000354452 KTN1Q86UP2 1357 aaKnown RBP22.95■■□□□ 1.27
TCF4-201ENST00000354452 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
TCF4-201ENST00000354452 CFDP1Q9UEE9 299 aaPredicted RBP22.95■■□□□ 1.26
TCF4-201ENST00000354452 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
TCF4-201ENST00000354452 POGKQ9P215 609 aa22.93■■□□□ 1.26
TCF4-201ENST00000354452 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
TCF4-201ENST00000354452 CENPQQ7L2Z9 268 aaPredicted RBP22.91■■□□□ 1.26
TCF4-201ENST00000354452 BECN1Q14457 450 aa22.9■■□□□ 1.26
TCF4-201ENST00000354452 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
TCF4-201ENST00000354452 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
TCF4-201ENST00000354452 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
TCF4-201ENST00000354452 FAM43AQ8N2R8 423 aa22.88■■□□□ 1.25
TCF4-201ENST00000354452 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
TCF4-201ENST00000354452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.86■■□□□ 1.25
TCF4-201ENST00000354452 UPF2Q9HAU5 1272 aaKnown RBP22.86■■□□□ 1.25
TCF4-201ENST00000354452 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
TCF4-201ENST00000354452 PNNQ9H307 717 aaKnown RBP22.84■■□□□ 1.25
TCF4-201ENST00000354452 EFCAB5A4FU69 1503 aa22.83■■□□□ 1.25
TCF4-201ENST00000354452 PANK3Q9H999 370 aa22.83■■□□□ 1.25
TCF4-201ENST00000354452 CCDC146Q8IYE0 955 aa22.83■■□□□ 1.24
TCF4-201ENST00000354452 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
TCF4-201ENST00000354452 DENND4BO75064 1496 aaPredicted RBP22.81■■□□□ 1.24
TCF4-201ENST00000354452 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
TCF4-201ENST00000354452 NUP155O75694 1391 aa22.81■■□□□ 1.24
TCF4-201ENST00000354452 L1TD1Q5T7N2 865 aaKnown RBP22.8■■□□□ 1.24
TCF4-201ENST00000354452 PKNOX2Q96KN3 472 aa22.8■■□□□ 1.24
TCF4-201ENST00000354452 KDM6BO15054 1643 aa22.79■■□□□ 1.24
TCF4-201ENST00000354452 C8orf34Q49A92 452 aa22.78■■□□□ 1.24
TCF4-201ENST00000354452 NEUROD2Q15784 382 aa22.78■■□□□ 1.24
TCF4-201ENST00000354452 GOLGA2Q08379 1002 aa22.77■■□□□ 1.24
TCF4-201ENST00000354452 SUPT6HQ7KZ85 1726 aaKnown RBP22.77■■□□□ 1.24
TCF4-201ENST00000354452 KNSTRNQ9Y448 316 aa22.76■■□□□ 1.23
TCF4-201ENST00000354452 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
TCF4-201ENST00000354452 TSPY4P0CV99 314 aa22.75■■□□□ 1.23
TCF4-201ENST00000354452 TSPY10P0CW01 314 aa22.75■■□□□ 1.23
TCF4-201ENST00000354452 HSP90AA1P07900 732 aaKnown RBP22.74■■□□□ 1.23
TCF4-201ENST00000354452 HSP90AA2PQ14568 343 aaPredicted RBP22.74■■□□□ 1.23
TCF4-201ENST00000354452 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
TCF4-201ENST00000354452 GOLGA6L3A6NEY3 463 aa22.74■■□□□ 1.23
TCF4-201ENST00000354452 EHBP1L1Q8N3D4 1523 aa22.74■■□□□ 1.23
TCF4-201ENST00000354452 NBPF1Q3BBV0 1214 aa22.73■■□□□ 1.23
TCF4-201ENST00000354452 LRPPRCP42704 1394 aaKnown RBP22.73■■□□□ 1.23
TCF4-201ENST00000354452 RRAGDQ9NQL2 400 aaPredicted RBP22.73■■□□□ 1.23
TCF4-201ENST00000354452 TEX14Q8IWB6 1497 aa22.72■■□□□ 1.23
TCF4-201ENST00000354452 BCAR3O75815 825 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms