RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 PELP1Q8IZL8 1130 aaKnown RBP25.4■■□□□ 1.66
APP-203ENST00000354192 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
APP-203ENST00000354192 FKBP8Q14318 412 aa25.4■■□□□ 1.66
APP-203ENST00000354192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.4■■□□□ 1.662e-7■■□□□ 12.4
APP-203ENST00000354192 NUP153P49790 1475 aaKnown RBP25.39■■□□□ 1.65
APP-203ENST00000354192 PKD2Q13563 968 aa25.36■■□□□ 1.65
APP-203ENST00000354192 WDR62O43379 1518 aa25.36■■□□□ 1.65
APP-203ENST00000354192 CARMIL2Q6F5E8 1435 aa25.36■■□□□ 1.65
APP-203ENST00000354192 KDM6BO15054 1643 aa25.35■■□□□ 1.65
APP-203ENST00000354192 TSPY4P0CV99 314 aa25.35■■□□□ 1.65
APP-203ENST00000354192 TSPY10P0CW01 314 aa25.35■■□□□ 1.65
APP-203ENST00000354192 HNRNPUQ00839 825 aaKnown RBP eCLIP25.35■■□□□ 1.65
APP-203ENST00000354192 NBPF8Q3BBV2 869 aa25.33■■□□□ 1.65
APP-203ENST00000354192 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
APP-203ENST00000354192 DAPK1P53355 1430 aa25.32■■□□□ 1.64
APP-203ENST00000354192 ABCC5O15440 1437 aa25.31■■□□□ 1.64
APP-203ENST00000354192 IRX6P78412 446 aaPredicted RBP25.31■■□□□ 1.64
APP-203ENST00000354192 WASHC2AQ641Q2 1341 aa25.3■■□□□ 1.64
APP-203ENST00000354192 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
APP-203ENST00000354192 C11orf95C9JLR9 678 aaPredicted RBP25.28■■□□□ 1.64
APP-203ENST00000354192 NEFLP07196 543 aa25.28■■□□□ 1.64
APP-203ENST00000354192 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
APP-203ENST00000354192 MIA2Q96PC5 1412 aa25.28■■□□□ 1.64
APP-203ENST00000354192 RGL3Q3MIN7 710 aa25.26■■□□□ 1.63
APP-203ENST00000354192 MYT1LQ9UL68 1186 aa25.26■■□□□ 1.63
APP-203ENST00000354192 TROQ12816 1431 aaPredicted RBP25.24■■□□□ 1.63
APP-203ENST00000354192 NUP155O75694 1391 aa25.22■■□□□ 1.63
APP-203ENST00000354192 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
APP-203ENST00000354192 CCDC184Q52MB2 194 aa25.21■■□□□ 1.63
APP-203ENST00000354192 PTPRGP23470 1445 aa25.21■■□□□ 1.63
APP-203ENST00000354192 RAPGEF6Q8TEU7 1601 aa25.2■■□□□ 1.62
APP-203ENST00000354192 MAGI1Q96QZ7 1491 aaPredicted RBP25.2■■□□□ 1.62
APP-203ENST00000354192 ARHGEF11O15085 1522 aa25.2■■□□□ 1.62
APP-203ENST00000354192 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
APP-203ENST00000354192 DENND4BO75064 1496 aaPredicted RBP25.17■■□□□ 1.62
APP-203ENST00000354192 MRS2Q9HD23 443 aa25.16■■□□□ 1.62
APP-203ENST00000354192 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
APP-203ENST00000354192 DCAF11Q8TEB1 546 aa25.14■■□□□ 1.61
APP-203ENST00000354192 GPATCH8Q9UKJ3 1502 aaKnown RBP25.14■■□□□ 1.61
APP-203ENST00000354192 ANKRD30AQ9BXX3 1397 aa25.13■■□□□ 1.61
APP-203ENST00000354192 ANKRD30BQ9BXX2 1392 aa25.13■■□□□ 1.61
APP-203ENST00000354192 CCER2I3L3R5 266 aa25.13■■□□□ 1.61
APP-203ENST00000354192 KIF14Q15058 1648 aa25.11■■□□□ 1.61
APP-203ENST00000354192 NCOA1Q15788 1441 aa25.09■■□□□ 1.61
APP-203ENST00000354192 ANKRD50Q9ULJ7 1429 aa25.08■■□□□ 1.6
APP-203ENST00000354192 CARD11Q9BXL7 1154 aa25.07■■□□□ 1.6
APP-203ENST00000354192 ATP10BO94823 1461 aa25.07■■□□□ 1.6
APP-203ENST00000354192 AKNAQ7Z591 1439 aa25.07■■□□□ 1.6
APP-203ENST00000354192 ROCK1Q13464 1354 aa25.03■■□□□ 1.6
APP-203ENST00000354192 KIF7Q2M1P5 1343 aa25.03■■□□□ 1.6
APP-203ENST00000354192 NUP160Q12769 1436 aa25.02■■□□□ 1.6
APP-203ENST00000354192 KIF15Q9NS87 1388 aa25.01■■□□□ 1.59
APP-203ENST00000354192 SALL2Q9Y467 1007 aaPredicted RBP25■■□□□ 1.59
APP-203ENST00000354192 C9orf84Q5VXU9 1444 aa24.99■■□□□ 1.59
APP-203ENST00000354192 CCDC7Q96M83 1385 aa24.99■■□□□ 1.59
APP-203ENST00000354192 PRKRIP1Q9H875 184 aaPredicted RBP24.98■■□□□ 1.59
APP-203ENST00000354192 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
APP-203ENST00000354192 DNMT1P26358 1616 aaKnown RBP24.95■■□□□ 1.58
APP-203ENST00000354192 RPRD2Q5VT52 1461 aaKnown RBP24.95■■□□□ 1.58
APP-203ENST00000354192 GCC2Q8IWJ2 1684 aa24.95■■□□□ 1.58
APP-203ENST00000354192 ST20-MTHFSA0A0A6YYL1 179 aa24.94■■□□□ 1.58
APP-203ENST00000354192 USP47Q96K76 1375 aa24.92■■□□□ 1.58
APP-203ENST00000354192 PZPP20742 1482 aa24.91■■□□□ 1.58
APP-203ENST00000354192 KIAA1107Q9UPP5 1409 aa24.91■■□□□ 1.58
APP-203ENST00000354192 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
APP-203ENST00000354192 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
APP-203ENST00000354192 AFAP1Q8N556 730 aa24.86■■□□□ 1.57
APP-203ENST00000354192 TSHZ2Q9NRE2 1034 aa24.85■■□□□ 1.57
APP-203ENST00000354192 NBPF1Q3BBV0 1214 aa24.85■■□□□ 1.57
APP-203ENST00000354192 TMC1Q8TDI8 760 aa24.82■■□□□ 1.56
APP-203ENST00000354192 TEX14Q8IWB6 1497 aa24.82■■□□□ 1.56
APP-203ENST00000354192 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
APP-203ENST00000354192 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
APP-203ENST00000354192 ROCK2O75116 1388 aaKnown RBP24.79■■□□□ 1.56
APP-203ENST00000354192 EFCAB2Q5VUJ9 269 aa24.77■■□□□ 1.56
APP-203ENST00000354192 ABCA8O94911 1581 aa24.76■■□□□ 1.55
APP-203ENST00000354192 ITSN2Q9NZM3 1697 aa24.75■■□□□ 1.55
APP-203ENST00000354192 ABCC10Q5T3U5 1492 aa24.75■■□□□ 1.55
APP-203ENST00000354192 CC2D1BQ5T0F9 858 aaKnown RBP24.74■■□□□ 1.55
APP-203ENST00000354192 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
APP-203ENST00000354192 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
APP-203ENST00000354192 SYCP2Q9BX26 1530 aa24.69■■□□□ 1.54
APP-203ENST00000354192 CDC42BPAQ5VT25 1732 aa24.69■■□□□ 1.54
APP-203ENST00000354192 B4GALNT3Q6L9W6 998 aa24.68■■□□□ 1.54
APP-203ENST00000354192 CCDC141Q6ZP82 1450 aa24.68■■□□□ 1.54
APP-203ENST00000354192 PLEKHH2Q8IVE3 1493 aa24.68■■□□□ 1.54
APP-203ENST00000354192 SPAG9O60271 1321 aaKnown RBP24.67■■□□□ 1.54
APP-203ENST00000354192 RSPH4AQ5TD94 716 aa24.66■■□□□ 1.54
APP-203ENST00000354192 CHD1O14646 1710 aa24.66■■□□□ 1.54
APP-203ENST00000354192 KIF3BO15066 747 aa24.65■■□□□ 1.54
APP-203ENST00000354192 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
APP-203ENST00000354192 ADGRL2O95490 1459 aa24.64■■□□□ 1.54
APP-203ENST00000354192 SPATA31E1Q6ZUB1 1445 aa24.63■■□□□ 1.53
APP-203ENST00000354192 SAMD9LQ8IVG5 1584 aa24.57■■□□□ 1.52
APP-203ENST00000354192 TTC37Q6PGP7 1564 aa24.56■■□□□ 1.52
APP-203ENST00000354192 ADGBQ8N7X0 1667 aa24.56■■□□□ 1.52
APP-203ENST00000354192 NPM1P06748 294 aaKnown RBP eCLIP24.56■■□□□ 1.52
APP-203ENST00000354192 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
APP-203ENST00000354192 GGT6Q6P531 493 aa24.54■■□□□ 1.52
APP-203ENST00000354192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms