RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 PLB1Q6P1J6 1458 aa30.99■■■□□ 2.55
NKX2-4-201ENST00000351817 TRIM52Q96A61 297 aa30.97■■■□□ 2.55
NKX2-4-201ENST00000351817 ROCK1Q13464 1354 aa30.91■■■□□ 2.54
NKX2-4-201ENST00000351817 MPHOSPH9Q99550 1183 aa30.9■■■□□ 2.54
NKX2-4-201ENST00000351817 DNMT1P26358 1616 aaKnown RBP30.89■■■□□ 2.54
NKX2-4-201ENST00000351817 DAPK1P53355 1430 aa30.89■■■□□ 2.54
NKX2-4-201ENST00000351817 CHD1O14646 1710 aa30.87■■■□□ 2.53
NKX2-4-201ENST00000351817 CDK11AQ9UQ88 783 aaPredicted RBP30.86■■■□□ 2.53
NKX2-4-201ENST00000351817 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
NKX2-4-201ENST00000351817 ABCA8O94911 1581 aa30.84■■■□□ 2.53
NKX2-4-201ENST00000351817 TROQ12816 1431 aaPredicted RBP30.83■■■□□ 2.53
NKX2-4-201ENST00000351817 ABCC5O15440 1437 aa30.82■■■□□ 2.53
NKX2-4-201ENST00000351817 HSPA5P11021 654 aaKnown RBP30.79■■■□□ 2.52
NKX2-4-201ENST00000351817 ADCY10Q96PN6 1610 aa30.76■■■□□ 2.52
NKX2-4-201ENST00000351817 EIF4G2P78344 907 aaKnown RBP eCLIP30.75■■■□□ 2.51
NKX2-4-201ENST00000351817 KIF14Q15058 1648 aa30.74■■■□□ 2.51
NKX2-4-201ENST00000351817 ANKRD30BQ9BXX2 1392 aa30.73■■■□□ 2.51
NKX2-4-201ENST00000351817 L3MBTL2Q969R5 705 aa30.73■■■□□ 2.51
NKX2-4-201ENST00000351817 WASHC2AQ641Q2 1341 aa30.73■■■□□ 2.51
NKX2-4-201ENST00000351817 RPRD2Q5VT52 1461 aaKnown RBP30.72■■■□□ 2.51
NKX2-4-201ENST00000351817 FKBP8Q14318 412 aa30.72■■■□□ 2.51
NKX2-4-201ENST00000351817 ZNF644Q9H582 1327 aaPredicted RBP30.71■■■□□ 2.51
NKX2-4-201ENST00000351817 ITSN2Q9NZM3 1697 aa30.71■■■□□ 2.51
NKX2-4-201ENST00000351817 ATP10BO94823 1461 aa30.7■■■□□ 2.51
NKX2-4-201ENST00000351817 FOXD1Q16676 465 aa30.69■■■□□ 2.5
NKX2-4-201ENST00000351817 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
NKX2-4-201ENST00000351817 NEFLP07196 543 aa30.67■■■□□ 2.5
NKX2-4-201ENST00000351817 GPATCH8Q9UKJ3 1502 aaKnown RBP30.67■■■□□ 2.5
NKX2-4-201ENST00000351817 PTPRGP23470 1445 aa30.66■■■□□ 2.5
NKX2-4-201ENST00000351817 TSHZ2Q9NRE2 1034 aa30.65■■■□□ 2.5
NKX2-4-201ENST00000351817 CAMSAP2Q08AD1 1489 aa30.65■■■□□ 2.5
NKX2-4-201ENST00000351817 ADGBQ8N7X0 1667 aa30.64■■■□□ 2.5
NKX2-4-201ENST00000351817 TEX14Q8IWB6 1497 aa30.64■■■□□ 2.5
NKX2-4-201ENST00000351817 CNTLNQ9NXG0 1405 aa30.62■■■□□ 2.49
NKX2-4-201ENST00000351817 SLC4A1APQ9BWU0 796 aaKnown RBP30.62■■■□□ 2.49
NKX2-4-201ENST00000351817 BCANQ96GW7 911 aa30.61■■■□□ 2.49
NKX2-4-201ENST00000351817 CFDP1Q9UEE9 299 aaPredicted RBP30.6■■■□□ 2.49
NKX2-4-201ENST00000351817 NCOA1Q15788 1441 aa30.59■■■□□ 2.49
NKX2-4-201ENST00000351817 PLEKHD1A6NEE1 506 aa30.59■■■□□ 2.49
NKX2-4-201ENST00000351817 CROCC2H7BZ55 1655 aa30.57■■■□□ 2.48
NKX2-4-201ENST00000351817 ADGRL2O95490 1459 aa30.56■■■□□ 2.48
NKX2-4-201ENST00000351817 ABCC10Q5T3U5 1492 aa30.56■■■□□ 2.48
NKX2-4-201ENST00000351817 PZPP20742 1482 aa30.56■■■□□ 2.48
NKX2-4-201ENST00000351817 CCDC7Q96M83 1385 aa30.55■■■□□ 2.48
NKX2-4-201ENST00000351817 NBPF8Q3BBV2 869 aa30.54■■■□□ 2.48
NKX2-4-201ENST00000351817 CDC42BPAQ5VT25 1732 aa30.54■■■□□ 2.48
NKX2-4-201ENST00000351817 ERCC6L2Q5T890 1561 aa30.54■■■□□ 2.48
NKX2-4-201ENST00000351817 POLR1AO95602 1720 aaPredicted RBP30.51■■■□□ 2.48
NKX2-4-201ENST00000351817 HNRNPUQ00839 825 aaKnown RBP eCLIP30.5■■■□□ 2.47
NKX2-4-201ENST00000351817 C11orf95C9JLR9 678 aaPredicted RBP30.48■■■□□ 2.47
NKX2-4-201ENST00000351817 SPATA31E1Q6ZUB1 1445 aa30.48■■■□□ 2.47
NKX2-4-201ENST00000351817 ZNF777Q9ULD5 760 aaPredicted RBP30.47■■■□□ 2.47
NKX2-4-201ENST00000351817 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
NKX2-4-201ENST00000351817 ANKRD30AQ9BXX3 1397 aa30.46■■■□□ 2.47
NKX2-4-201ENST00000351817 KIAA1107Q9UPP5 1409 aa30.45■■■□□ 2.46
NKX2-4-201ENST00000351817 PRKRIP1Q9H875 184 aaPredicted RBP30.41■■■□□ 2.46
NKX2-4-201ENST00000351817 MBD5Q9P267 1494 aa30.4■■■□□ 2.46
NKX2-4-201ENST00000351817 SHANK2Q9UPX8 1470 aa30.37■■■□□ 2.45
NKX2-4-201ENST00000351817 ABCC2Q92887 1545 aa30.37■■■□□ 2.45
NKX2-4-201ENST00000351817 KIF7Q2M1P5 1343 aa30.37■■■□□ 2.45
NKX2-4-201ENST00000351817 ANKRD50Q9ULJ7 1429 aa30.36■■■□□ 2.45
NKX2-4-201ENST00000351817 PKD2Q13563 968 aa30.32■■■□□ 2.45
NKX2-4-201ENST00000351817 CCDC184Q52MB2 194 aa30.31■■■□□ 2.44
NKX2-4-201ENST00000351817 CDC42BPBQ9Y5S2 1711 aa30.31■■■□□ 2.44
NKX2-4-201ENST00000351817 PREX2Q70Z35 1606 aa30.3■■■□□ 2.44
NKX2-4-201ENST00000351817 C9orf84Q5VXU9 1444 aa30.29■■■□□ 2.44
NKX2-4-201ENST00000351817 MRS2Q9HD23 443 aa30.26■■■□□ 2.43
NKX2-4-201ENST00000351817 KDM5DQ9BY66 1539 aa30.25■■■□□ 2.43
NKX2-4-201ENST00000351817 SAMD9LQ8IVG5 1584 aa30.25■■■□□ 2.43
NKX2-4-201ENST00000351817 ARHGEF5Q12774 1597 aa30.25■■■□□ 2.43
NKX2-4-201ENST00000351817 TTC37Q6PGP7 1564 aa30.25■■■□□ 2.43
NKX2-4-201ENST00000351817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.23■■■□□ 2.43
NKX2-4-201ENST00000351817 USP47Q96K76 1375 aa30.23■■■□□ 2.43
NKX2-4-201ENST00000351817 NUP155O75694 1391 aa30.22■■■□□ 2.43
NKX2-4-201ENST00000351817 UHRF1BP1Q6BDS2 1440 aa30.21■■■□□ 2.43
NKX2-4-201ENST00000351817 KDM5CP41229 1560 aa30.21■■■□□ 2.43
NKX2-4-201ENST00000351817 TSPY4P0CV99 314 aa30.2■■■□□ 2.43
NKX2-4-201ENST00000351817 TSPY10P0CW01 314 aa30.2■■■□□ 2.43
NKX2-4-201ENST00000351817 HNRNPMP52272 730 aaKnown RBP eCLIP30.2■■■□□ 2.43
NKX2-4-201ENST00000351817 UHRF1BP1LA0JNW5 1464 aa30.2■■■□□ 2.43
NKX2-4-201ENST00000351817 FAM9BQ8IZU0 186 aa30.2■■■□□ 2.42
NKX2-4-201ENST00000351817 BCORL1Q5H9F3 1711 aa30.19■■■□□ 2.42
NKX2-4-201ENST00000351817 ZCCHC11Q5TAX3 1644 aaKnown RBP30.19■■■□□ 2.42
NKX2-4-201ENST00000351817 ARID4BQ4LE39 1312 aaPredicted RBP30.18■■■□□ 2.42
NKX2-4-201ENST00000351817 ARHGEF12Q9NZN5 1544 aa30.18■■■□□ 2.42
NKX2-4-201ENST00000351817 ZBED9Q6R2W3 1325 aa30.18■■■□□ 2.42
NKX2-4-201ENST00000351817 ERICH6BQ5W0A0 696 aa30.18■■■□□ 2.42
NKX2-4-201ENST00000351817 RALGAPBQ86X10 1494 aa30.16■■■□□ 2.42
NKX2-4-201ENST00000351817 ZNF326Q5BKZ1 582 aaKnown RBP30.16■■■□□ 2.42
NKX2-4-201ENST00000351817 DHX29Q7Z478 1369 aaKnown RBP30.14■■■□□ 2.42
NKX2-4-201ENST00000351817 KIF15Q9NS87 1388 aa30.13■■■□□ 2.41
NKX2-4-201ENST00000351817 CCDC141Q6ZP82 1450 aa30.13■■■□□ 2.41
NKX2-4-201ENST00000351817 MYO5CQ9NQX4 1742 aa30.12■■■□□ 2.41
NKX2-4-201ENST00000351817 ARHGAP5Q13017 1502 aa30.12■■■□□ 2.41
NKX2-4-201ENST00000351817 RBM19Q9Y4C8 960 aaKnown RBP30.1■■■□□ 2.41
NKX2-4-201ENST00000351817 SYCP2Q9BX26 1530 aa30.09■■■□□ 2.41
NKX2-4-201ENST00000351817 IRX6P78412 446 aaPredicted RBP30.07■■■□□ 2.4
NKX2-4-201ENST00000351817 ROCK2O75116 1388 aaKnown RBP30.07■■■□□ 2.4
NKX2-4-201ENST00000351817 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
NKX2-4-201ENST00000351817 CARD11Q9BXL7 1154 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms