RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
SMPD4-201ENST00000351288 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
SMPD4-201ENST00000351288 TARBP1Q13395 1621 aaKnown RBP14.41□□□□□ -0.1
SMPD4-201ENST00000351288 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMPD4-201ENST00000351288 TSHZ2Q9NRE2 1034 aa14.4□□□□□ -0.1
SMPD4-201ENST00000351288 PKD2Q13563 968 aa14.4□□□□□ -0.1
SMPD4-201ENST00000351288 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-201ENST00000351288 CARMIL2Q6F5E8 1435 aa14.39□□□□□ -0.11
SMPD4-201ENST00000351288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.39□□□□□ -0.114e-10■■■■■ 33.4
SMPD4-201ENST00000351288 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
SMPD4-201ENST00000351288 IQGAP2Q13576 1575 aa14.38□□□□□ -0.11
SMPD4-201ENST00000351288 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
SMPD4-201ENST00000351288 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMPD4-201ENST00000351288 UGGT2Q9NYU1 1516 aa14.37□□□□□ -0.11
SMPD4-201ENST00000351288 PRG4Q92954 1404 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-201ENST00000351288 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-201ENST00000351288 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
SMPD4-201ENST00000351288 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
SMPD4-201ENST00000351288 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.12
SMPD4-201ENST00000351288 PTPRGP23470 1445 aa14.32□□□□□ -0.12
SMPD4-201ENST00000351288 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
SMPD4-201ENST00000351288 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
SMPD4-201ENST00000351288 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
SMPD4-201ENST00000351288 NUP155O75694 1391 aa14.31□□□□□ -0.12
SMPD4-201ENST00000351288 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
SMPD4-201ENST00000351288 MRS2Q9HD23 443 aa14.3□□□□□ -0.12
SMPD4-201ENST00000351288 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
SMPD4-201ENST00000351288 CARD11Q9BXL7 1154 aa14.28□□□□□ -0.12
SMPD4-201ENST00000351288 ABCC5O15440 1437 aa14.28□□□□□ -0.12
SMPD4-201ENST00000351288 NUP153P49790 1475 aaKnown RBP14.27□□□□□ -0.12
SMPD4-201ENST00000351288 DAPK1P53355 1430 aa14.27□□□□□ -0.13
SMPD4-201ENST00000351288 WDR62O43379 1518 aa14.27□□□□□ -0.13
SMPD4-201ENST00000351288 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.13
SMPD4-201ENST00000351288 DISP1Q96F81 1524 aa14.26□□□□□ -0.13
SMPD4-201ENST00000351288 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
SMPD4-201ENST00000351288 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
SMPD4-201ENST00000351288 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
SMPD4-201ENST00000351288 KIAA0586Q9BVV6 1533 aa14.22□□□□□ -0.13
SMPD4-201ENST00000351288 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
SMPD4-201ENST00000351288 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
SMPD4-201ENST00000351288 TCOF1Q13428 1488 aaKnown RBP14.22□□□□□ -0.13
SMPD4-201ENST00000351288 MIA2Q96PC5 1412 aa14.21□□□□□ -0.13
SMPD4-201ENST00000351288 ANKRD30AQ9BXX3 1397 aa14.2□□□□□ -0.14
SMPD4-201ENST00000351288 CCDC7Q96M83 1385 aa14.2□□□□□ -0.14
SMPD4-201ENST00000351288 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
SMPD4-201ENST00000351288 EIF4G3O43432 1585 aaKnown RBP14.19□□□□□ -0.14
SMPD4-201ENST00000351288 GGT6Q6P531 493 aa14.18□□□□□ -0.14
SMPD4-201ENST00000351288 TMC1Q8TDI8 760 aa14.18□□□□□ -0.14
SMPD4-201ENST00000351288 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
SMPD4-201ENST00000351288 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
SMPD4-201ENST00000351288 KIF14Q15058 1648 aa14.16□□□□□ -0.14
SMPD4-201ENST00000351288 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
SMPD4-201ENST00000351288 B4GALNT3Q6L9W6 998 aa14.16□□□□□ -0.14
SMPD4-201ENST00000351288 CAMSAP2Q08AD1 1489 aa14.16□□□□□ -0.14
SMPD4-201ENST00000351288 RAPGEF6Q8TEU7 1601 aa14.15□□□□□ -0.14
SMPD4-201ENST00000351288 KIF3BO15066 747 aa14.15□□□□□ -0.14
SMPD4-201ENST00000351288 GCC2Q8IWJ2 1684 aa14.15□□□□□ -0.14
SMPD4-201ENST00000351288 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
SMPD4-201ENST00000351288 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
SMPD4-201ENST00000351288 GPATCH8Q9UKJ3 1502 aaKnown RBP14.14□□□□□ -0.15
SMPD4-201ENST00000351288 NCOA1Q15788 1441 aa14.14□□□□□ -0.15
SMPD4-201ENST00000351288 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-201ENST00000351288 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
SMPD4-201ENST00000351288 RPRD2Q5VT52 1461 aaKnown RBP14.13□□□□□ -0.15
SMPD4-201ENST00000351288 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
SMPD4-201ENST00000351288 SYNJ2O15056 1496 aa14.13□□□□□ -0.15
SMPD4-201ENST00000351288 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
SMPD4-201ENST00000351288 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
SMPD4-201ENST00000351288 ST20-MTHFSA0A0A6YYL1 179 aa14.11□□□□□ -0.15
SMPD4-201ENST00000351288 USP47Q96K76 1375 aa14.11□□□□□ -0.15
SMPD4-201ENST00000351288 MLECQ14165 292 aa14.11□□□□□ -0.15
SMPD4-201ENST00000351288 ANKRD50Q9ULJ7 1429 aa14.1□□□□□ -0.15
SMPD4-201ENST00000351288 PZPP20742 1482 aa14.1□□□□□ -0.15
SMPD4-201ENST00000351288 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
SMPD4-201ENST00000351288 TEX14Q8IWB6 1497 aa14.1□□□□□ -0.15
SMPD4-201ENST00000351288 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
SMPD4-201ENST00000351288 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
SMPD4-201ENST00000351288 SPAG9O60271 1321 aaKnown RBP14.09□□□□□ -0.15
SMPD4-201ENST00000351288 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
SMPD4-201ENST00000351288 SAFB2Q14151 953 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMPD4-201ENST00000351288 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
SMPD4-201ENST00000351288 ATP10BO94823 1461 aa14.05□□□□□ -0.16
SMPD4-201ENST00000351288 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
SMPD4-201ENST00000351288 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
SMPD4-201ENST00000351288 KIAA1107Q9UPP5 1409 aa14.05□□□□□ -0.16
SMPD4-201ENST00000351288 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-201ENST00000351288 C9orf84Q5VXU9 1444 aa14.04□□□□□ -0.16
SMPD4-201ENST00000351288 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
SMPD4-201ENST00000351288 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.16
SMPD4-201ENST00000351288 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
SMPD4-201ENST00000351288 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
SMPD4-201ENST00000351288 ARHGAP5Q13017 1502 aa13.99□□□□□ -0.17
SMPD4-201ENST00000351288 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
SMPD4-201ENST00000351288 MSH5O43196 834 aa13.98□□□□□ -0.17
SMPD4-201ENST00000351288 MYT1Q01538 1121 aa13.98□□□□□ -0.17
SMPD4-201ENST00000351288 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
SMPD4-201ENST00000351288 ZBED9Q6R2W3 1325 aa13.98□□□□□ -0.17
SMPD4-201ENST00000351288 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
SMPD4-201ENST00000351288 STK26Q9P289 416 aa13.97□□□□□ -0.17
SMPD4-201ENST00000351288 CCDC144AA2RUR9 1427 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms