RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 ITSN2Q9NZM3 1697 aa34.19■■■■□ 3.06
USP25-203ENST00000351097 DAPK1P53355 1430 aa34.17■■■■□ 3.06
USP25-203ENST00000351097 RRP7BPQ9NSQ0 103 aa34.16■■■■□ 3.06
USP25-203ENST00000351097 DNMT1P26358 1616 aaKnown RBP34.16■■■■□ 3.06
USP25-203ENST00000351097 CFDP1Q9UEE9 299 aaPredicted RBP34.15■■■■□ 3.06
USP25-203ENST00000351097 GCC2Q8IWJ2 1684 aa34.15■■■■□ 3.06
USP25-203ENST00000351097 ABCC5O15440 1437 aa34.14■■■■□ 3.06
USP25-203ENST00000351097 ABCC10Q5T3U5 1492 aa34.14■■■■□ 3.06
USP25-203ENST00000351097 CAMSAP2Q08AD1 1489 aa34.12■■■■□ 3.05
USP25-203ENST00000351097 ABCC2Q92887 1545 aa34.08■■■■□ 3.05
USP25-203ENST00000351097 ROCK1Q13464 1354 aa34.07■■■■□ 3.04
USP25-203ENST00000351097 CDC42BPAQ5VT25 1732 aa34.05■■■■□ 3.04
USP25-203ENST00000351097 SIN3AQ96ST3 1273 aa34.05■■■■□ 3.04
USP25-203ENST00000351097 KDM6BO15054 1643 aa34.03■■■■□ 3.04
USP25-203ENST00000351097 ZNF777Q9ULD5 760 aaPredicted RBP34.01■■■■□ 3.04
USP25-203ENST00000351097 UHRF1BP1LA0JNW5 1464 aa33.94■■■■□ 3.02
USP25-203ENST00000351097 TIMELESSQ9UNS1 1208 aa33.91■■■■□ 3.02
USP25-203ENST00000351097 CROCC2H7BZ55 1655 aa33.89■■■■□ 3.02
USP25-203ENST00000351097 NCOA1Q15788 1441 aa33.86■■■■□ 3.01
USP25-203ENST00000351097 TRIM52Q96A61 297 aa33.86■■■■□ 3.01
USP25-203ENST00000351097 DENND4BO75064 1496 aaPredicted RBP33.86■■■■□ 3.01
USP25-203ENST00000351097 ADGRL2O95490 1459 aa33.86■■■■□ 3.01
USP25-203ENST00000351097 KDM5BQ9UGL1 1544 aa33.85■■■■□ 3.01
USP25-203ENST00000351097 ADGBQ8N7X0 1667 aa33.85■■■■□ 3.01
USP25-203ENST00000351097 ZCCHC11Q5TAX3 1644 aaKnown RBP33.84■■■■□ 3.01
USP25-203ENST00000351097 PREX2Q70Z35 1606 aa33.84■■■■□ 3.01
USP25-203ENST00000351097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.82■■■■□ 39e-7■■■□□ 17.5
USP25-203ENST00000351097 TTC37Q6PGP7 1564 aa33.82■■■■□ 3
USP25-203ENST00000351097 CDC42BPBQ9Y5S2 1711 aa33.81■■■■□ 3
USP25-203ENST00000351097 SHANK2Q9UPX8 1470 aa33.78■■■■□ 3
USP25-203ENST00000351097 MPHOSPH9Q99550 1183 aa33.77■■■■□ 3
USP25-203ENST00000351097 SAMD9LQ8IVG5 1584 aa33.76■■■■□ 3
USP25-203ENST00000351097 ANKRD30AQ9BXX3 1397 aa33.76■■■■□ 3
USP25-203ENST00000351097 MBD5Q9P267 1494 aa33.75■■■□□ 2.99
USP25-203ENST00000351097 ARHGEF5Q12774 1597 aa33.75■■■□□ 2.99
USP25-203ENST00000351097 OSCARQ8IYS5 282 aa33.74■■■□□ 2.99
USP25-203ENST00000351097 C9orf84Q5VXU9 1444 aa33.73■■■□□ 2.99
USP25-203ENST00000351097 HNRNPMP52272 730 aaKnown RBP eCLIP33.72■■■□□ 2.992e-6■■■■□ 25
USP25-203ENST00000351097 TONSLQ96HA7 1378 aa33.71■■■□□ 2.99
USP25-203ENST00000351097 PPP1R15AO75807 674 aaPredicted RBP33.71■■■□□ 2.99
USP25-203ENST00000351097 KCNH8Q96L42 1107 aa33.71■■■□□ 2.99
USP25-203ENST00000351097 ARHGAP5Q13017 1502 aa33.69■■■□□ 2.98
USP25-203ENST00000351097 TSPY4P0CV99 314 aa33.67■■■□□ 2.98
USP25-203ENST00000351097 TSPY10P0CW01 314 aa33.67■■■□□ 2.98
USP25-203ENST00000351097 MYO5CQ9NQX4 1742 aa33.66■■■□□ 2.98
USP25-203ENST00000351097 CCDC141Q6ZP82 1450 aa33.65■■■□□ 2.98
USP25-203ENST00000351097 ANKRD50Q9ULJ7 1429 aa33.63■■■□□ 2.97
USP25-203ENST00000351097 RSPH4AQ5TD94 716 aa33.61■■■□□ 2.97
USP25-203ENST00000351097 SYCP2Q9BX26 1530 aa33.61■■■□□ 2.97
USP25-203ENST00000351097 FOXD1Q16676 465 aa33.6■■■□□ 2.97
USP25-203ENST00000351097 PZPP20742 1482 aa33.6■■■□□ 2.97
USP25-203ENST00000351097 PLCH2O75038 1416 aa33.59■■■□□ 2.97
USP25-203ENST00000351097 SLC4A1APQ9BWU0 796 aaKnown RBP33.58■■■□□ 2.97
USP25-203ENST00000351097 ANKRD30BQ9BXX2 1392 aa33.55■■■□□ 2.96
USP25-203ENST00000351097 KIAA1107Q9UPP5 1409 aa33.55■■■□□ 2.96
USP25-203ENST00000351097 PLEKHH2Q8IVE3 1493 aa33.54■■■□□ 2.96
USP25-203ENST00000351097 KIF15Q9NS87 1388 aa33.54■■■□□ 2.96
USP25-203ENST00000351097 WDR7Q9Y4E6 1490 aa33.52■■■□□ 2.96
USP25-203ENST00000351097 MAST1Q9Y2H9 1570 aa33.49■■■□□ 2.95
USP25-203ENST00000351097 ARHGEF12Q9NZN5 1544 aa33.48■■■□□ 2.95
USP25-203ENST00000351097 DDX10Q13206 875 aaKnown RBP33.47■■■□□ 2.95
USP25-203ENST00000351097 EFCAB2Q5VUJ9 269 aa33.47■■■□□ 2.95
USP25-203ENST00000351097 RPRD2Q5VT52 1461 aaKnown RBP33.44■■■□□ 2.94
USP25-203ENST00000351097 ARAP3Q8WWN8 1544 aa33.42■■■□□ 2.94
USP25-203ENST00000351097 ABCC1P33527 1531 aa33.41■■■□□ 2.94
USP25-203ENST00000351097 NUP155O75694 1391 aa33.4■■■□□ 2.94
USP25-203ENST00000351097 KDM5DQ9BY66 1539 aa33.4■■■□□ 2.94
USP25-203ENST00000351097 ASXL2Q76L83 1435 aa33.4■■■□□ 2.94
USP25-203ENST00000351097 PKD2Q13563 968 aa33.37■■■□□ 2.93
USP25-203ENST00000351097 PLXNC1O60486 1568 aa33.36■■■□□ 2.93
USP25-203ENST00000351097 L3MBTL2Q969R5 705 aa33.36■■■□□ 2.93
USP25-203ENST00000351097 ABCA9Q8IUA7 1624 aa33.35■■■□□ 2.93
USP25-203ENST00000351097 SUPT16HQ9Y5B9 1047 aaKnown RBP33.33■■■□□ 2.93
USP25-203ENST00000351097 TRAPPC8Q9Y2L5 1435 aa33.32■■■□□ 2.92
USP25-203ENST00000351097 TEX14Q8IWB6 1497 aa33.31■■■□□ 2.92
USP25-203ENST00000351097 HIRIP3Q9BW71 556 aaPredicted RBP33.3■■■□□ 2.92
USP25-203ENST00000351097 NPM1P06748 294 aaKnown RBP eCLIP33.27■■■□□ 2.92
USP25-203ENST00000351097 FANCAO15360 1455 aa33.25■■■□□ 2.91
USP25-203ENST00000351097 DUOX2Q9NRD8 1548 aa33.24■■■□□ 2.91
USP25-203ENST00000351097 CCER2I3L3R5 266 aa33.22■■■□□ 2.91
USP25-203ENST00000351097 FAM135AQ9P2D6 1515 aa33.22■■■□□ 2.91
USP25-203ENST00000351097 UNC13BO14795 1591 aa33.21■■■□□ 2.91
USP25-203ENST00000351097 ANP32CO43423 234 aa33.2■■■□□ 2.9
USP25-203ENST00000351097 AFAP1Q8N556 730 aa33.19■■■□□ 2.9
USP25-203ENST00000351097 ERBINQ96RT1 1412 aa33.18■■■□□ 2.9
USP25-203ENST00000351097 RTEL1-TNFRSF6BF6WH68 1400 aa33.17■■■□□ 2.9
USP25-203ENST00000351097 SPAG9O60271 1321 aaKnown RBP33.16■■■□□ 2.9
USP25-203ENST00000351097 ZFYVE16Q7Z3T8 1539 aa33.14■■■□□ 2.9
USP25-203ENST00000351097 NBPF8Q3BBV2 869 aa33.13■■■□□ 2.89
USP25-203ENST00000351097 ADGRL1O94910 1474 aa33.12■■■□□ 2.89
USP25-203ENST00000351097 MAGI2Q86UL8 1455 aa33.1■■■□□ 2.89
USP25-203ENST00000351097 SCAPERQ9BY12 1400 aa33.09■■■□□ 2.89
USP25-203ENST00000351097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.09■■■□□ 2.897e-9■■■□□ 15.8
USP25-203ENST00000351097 IQGAP3Q86VI3 1631 aa33.08■■■□□ 2.89
USP25-203ENST00000351097 INO80Q9ULG1 1556 aaPredicted RBP33.05■■■□□ 2.88
USP25-203ENST00000351097 HSPA5P11021 654 aaKnown RBP33.04■■■□□ 2.88
USP25-203ENST00000351097 ATP7AQ04656 1500 aa33.03■■■□□ 2.88
USP25-203ENST00000351097 CD109Q6YHK3 1445 aa33.02■■■□□ 2.88
USP25-203ENST00000351097 EIF4G2P78344 907 aaKnown RBP eCLIP33.02■■■□□ 2.881e-7■■■□□ 17.9
USP25-203ENST00000351097 PLA2R1Q13018 1463 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms