RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 TMF1P82094 1093 aa25.83■■□□□ 1.73
RNF38-202ENST00000350199 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
RNF38-202ENST00000350199 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
RNF38-202ENST00000350199 CCER2I3L3R5 266 aa25.82■■□□□ 1.72
RNF38-202ENST00000350199 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.81■■□□□ 1.72
RNF38-202ENST00000350199 NCOA2Q15596 1464 aa25.81■■□□□ 1.72
RNF38-202ENST00000350199 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
RNF38-202ENST00000350199 KIF3BO15066 747 aa25.78■■□□□ 1.72
RNF38-202ENST00000350199 ZNF644Q9H582 1327 aaPredicted RBP25.78■■□□□ 1.72
RNF38-202ENST00000350199 CC2D1BQ5T0F9 858 aaKnown RBP25.77■■□□□ 1.72
RNF38-202ENST00000350199 ANP32AP39687 249 aaKnown RBP25.77■■□□□ 1.72
RNF38-202ENST00000350199 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
RNF38-202ENST00000350199 SUPT16HQ9Y5B9 1047 aaKnown RBP25.75■■□□□ 1.71
RNF38-202ENST00000350199 ROCK2O75116 1388 aaKnown RBP25.75■■□□□ 1.71
RNF38-202ENST00000350199 MLECQ14165 292 aa25.73■■□□□ 1.71
RNF38-202ENST00000350199 POGKQ9P215 609 aa25.73■■□□□ 1.71
RNF38-202ENST00000350199 NPM2Q86SE8 214 aaKnown RBP25.72■■□□□ 1.71
RNF38-202ENST00000350199 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.71
RNF38-202ENST00000350199 CFAP53Q96M91 514 aa25.7■■□□□ 1.7
RNF38-202ENST00000350199 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
RNF38-202ENST00000350199 TIAM1Q13009 1591 aa25.67■■□□□ 1.7
RNF38-202ENST00000350199 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
RNF38-202ENST00000350199 UACAQ9BZF9 1416 aa25.64■■□□□ 1.69
RNF38-202ENST00000350199 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
RNF38-202ENST00000350199 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
RNF38-202ENST00000350199 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
RNF38-202ENST00000350199 CCDC144AA2RUR9 1427 aa25.58■■□□□ 1.69
RNF38-202ENST00000350199 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
RNF38-202ENST00000350199 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
RNF38-202ENST00000350199 CUL7Q14999 1698 aa25.56■■□□□ 1.68
RNF38-202ENST00000350199 SAFB2Q14151 953 aaKnown RBP eCLIP25.55■■□□□ 1.68
RNF38-202ENST00000350199 TRHP20396 242 aaPredicted RBP25.55■■□□□ 1.68
RNF38-202ENST00000350199 WASHC2CQ9Y4E1 1318 aa25.54■■□□□ 1.68
RNF38-202ENST00000350199 KTN1Q86UP2 1357 aaKnown RBP25.54■■□□□ 1.68
RNF38-202ENST00000350199 NEUROD2Q15784 382 aa25.53■■□□□ 1.68
RNF38-202ENST00000350199 C14orf37Q86TY3 774 aa25.53■■□□□ 1.68
RNF38-202ENST00000350199 KIF15Q9NS87 1388 aa25.53■■□□□ 1.68
RNF38-202ENST00000350199 KIAA0586Q9BVV6 1533 aa25.53■■□□□ 1.68
RNF38-202ENST00000350199 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
RNF38-202ENST00000350199 SRPK2P78362 688 aaKnown RBP25.51■■□□□ 1.67
RNF38-202ENST00000350199 HECW1Q76N89 1606 aa25.51■■□□□ 1.67
RNF38-202ENST00000350199 STK26Q9P289 416 aa25.51■■□□□ 1.67
RNF38-202ENST00000350199 CYB5RLQ6IPT4 315 aa25.49■■□□□ 1.67
RNF38-202ENST00000350199 ANKRD50Q9ULJ7 1429 aa25.49■■□□□ 1.67
RNF38-202ENST00000350199 HDGFP51858 240 aaKnown RBP25.49■■□□□ 1.67
RNF38-202ENST00000350199 NUDCQ9Y266 331 aa25.48■■□□□ 1.67
RNF38-202ENST00000350199 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
RNF38-202ENST00000350199 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
RNF38-202ENST00000350199 ST20-MTHFSA0A0A6YYL1 179 aa25.47■■□□□ 1.67
RNF38-202ENST00000350199 RALBP1Q15311 655 aa25.47■■□□□ 1.67
RNF38-202ENST00000350199 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
RNF38-202ENST00000350199 PLEKHG5O94827 1062 aa25.46■■□□□ 1.67
RNF38-202ENST00000350199 TROQ12816 1431 aaPredicted RBP25.45■■□□□ 1.67
RNF38-202ENST00000350199 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
RNF38-202ENST00000350199 EIF3AQ14152 1382 aaKnown RBP25.44■■□□□ 1.66
RNF38-202ENST00000350199 MORC1Q86VD1 984 aa25.44■■□□□ 1.66
RNF38-202ENST00000350199 MAPK8IP3Q9UPT6 1336 aa25.43■■□□□ 1.66
RNF38-202ENST00000350199 UPF2Q9HAU5 1272 aaKnown RBP25.43■■□□□ 1.66
RNF38-202ENST00000350199 PPP4R2Q9NY27 417 aa25.43■■□□□ 1.66
RNF38-202ENST00000350199 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
RNF38-202ENST00000350199 CDK13Q14004 1512 aaKnown RBP25.41■■□□□ 1.66
RNF38-202ENST00000350199 USP47Q96K76 1375 aa25.41■■□□□ 1.66
RNF38-202ENST00000350199 HFM1A2PYH4 1435 aa25.4■■□□□ 1.66
RNF38-202ENST00000350199 U2SURPO15042 1029 aaKnown RBP25.4■■□□□ 1.66
RNF38-202ENST00000350199 NUTM2DQ5VT03 806 aaPredicted RBP25.38■■□□□ 1.65
RNF38-202ENST00000350199 SUPT6HQ7KZ85 1726 aaKnown RBP25.38■■□□□ 1.65
RNF38-202ENST00000350199 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
RNF38-202ENST00000350199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.37■■□□□ 1.65
RNF38-202ENST00000350199 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
RNF38-202ENST00000350199 MAP3K1Q13233 1512 aa25.35■■□□□ 1.65
RNF38-202ENST00000350199 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
RNF38-202ENST00000350199 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
RNF38-202ENST00000350199 AFAP1Q8N556 730 aa25.31■■□□□ 1.64
RNF38-202ENST00000350199 PRKRIP1Q9H875 184 aaPredicted RBP25.29■■□□□ 1.64
RNF38-202ENST00000350199 B4GALNT3Q6L9W6 998 aa25.29■■□□□ 1.64
RNF38-202ENST00000350199 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
RNF38-202ENST00000350199 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
RNF38-202ENST00000350199 TRAK1Q9UPV9 953 aa25.28■■□□□ 1.64
RNF38-202ENST00000350199 DAPK1P53355 1430 aa25.28■■□□□ 1.64
RNF38-202ENST00000350199 C9orf84Q5VXU9 1444 aa25.28■■□□□ 1.64
RNF38-202ENST00000350199 HDGFL2Q7Z4V5 671 aaPredicted RBP25.28■■□□□ 1.64
RNF38-202ENST00000350199 MYH16Q9H6N6 1097 aa25.27■■□□□ 1.64
RNF38-202ENST00000350199 FRAT1Q92837 279 aaPredicted RBP25.26■■□□□ 1.63
RNF38-202ENST00000350199 FTSJ3Q8IY81 847 aaKnown RBP25.25■■□□□ 1.63
RNF38-202ENST00000350199 PLB1Q6P1J6 1458 aa25.24■■□□□ 1.63
RNF38-202ENST00000350199 PANK3Q9H999 370 aa25.24■■□□□ 1.63
RNF38-202ENST00000350199 PNNQ9H307 717 aaKnown RBP25.23■■□□□ 1.63
RNF38-202ENST00000350199 NAIPQ13075 1403 aa25.23■■□□□ 1.63
RNF38-202ENST00000350199 HSP90AA1P07900 732 aaKnown RBP25.21■■□□□ 1.63
RNF38-202ENST00000350199 LMOD2Q6P5Q4 547 aa25.2■■□□□ 1.62
RNF38-202ENST00000350199 FAM69CQ0P6D2 419 aa25.19■■□□□ 1.62
RNF38-202ENST00000350199 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
RNF38-202ENST00000350199 CCDC7Q96M83 1385 aa25.19■■□□□ 1.62
RNF38-202ENST00000350199 VGFO15240 615 aaPredicted RBP25.18■■□□□ 1.62
RNF38-202ENST00000350199 KIF7Q2M1P5 1343 aa25.18■■□□□ 1.62
RNF38-202ENST00000350199 SOX12O15370 315 aa25.18■■□□□ 1.62
RNF38-202ENST00000350199 PLEKHH2Q8IVE3 1493 aa25.16■■□□□ 1.62
RNF38-202ENST00000350199 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
RNF38-202ENST00000350199 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
RNF38-202ENST00000350199 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms