RNA–Protein interactions for RNA: ENST00000349953.7

PARD3B-201, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-201ENST00000349953 KDM5BQ9UGL1 1544 aa16.5■□□□□ 0.23
PARD3B-201ENST00000349953 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
PARD3B-201ENST00000349953 KIF14Q15058 1648 aa16.5■□□□□ 0.23
PARD3B-201ENST00000349953 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
PARD3B-201ENST00000349953 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
PARD3B-201ENST00000349953 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
PARD3B-201ENST00000349953 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
PARD3B-201ENST00000349953 HSPA5P11021 654 aaKnown RBP16.46■□□□□ 0.23
PARD3B-201ENST00000349953 GCC2Q8IWJ2 1684 aa16.45■□□□□ 0.22
PARD3B-201ENST00000349953 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
PARD3B-201ENST00000349953 NUP160Q12769 1436 aa16.44■□□□□ 0.22
PARD3B-201ENST00000349953 CNGB1Q14028 1251 aaPredicted RBP16.43■□□□□ 0.22
PARD3B-201ENST00000349953 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
PARD3B-201ENST00000349953 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
PARD3B-201ENST00000349953 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
PARD3B-201ENST00000349953 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
PARD3B-201ENST00000349953 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
PARD3B-201ENST00000349953 C11orf95C9JLR9 678 aaPredicted RBP16.42■□□□□ 0.22
PARD3B-201ENST00000349953 ANP32CO43423 234 aa16.41■□□□□ 0.22
PARD3B-201ENST00000349953 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
PARD3B-201ENST00000349953 WASHC2AQ641Q2 1341 aa16.4■□□□□ 0.22
PARD3B-201ENST00000349953 BCANQ96GW7 911 aa16.4■□□□□ 0.22
PARD3B-201ENST00000349953 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
PARD3B-201ENST00000349953 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
PARD3B-201ENST00000349953 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
PARD3B-201ENST00000349953 ATP10BO94823 1461 aa16.38■□□□□ 0.21
PARD3B-201ENST00000349953 AKNAQ7Z591 1439 aa16.38■□□□□ 0.21
PARD3B-201ENST00000349953 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
PARD3B-201ENST00000349953 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
PARD3B-201ENST00000349953 ROCK1Q13464 1354 aa16.35■□□□□ 0.21
PARD3B-201ENST00000349953 PKD2Q13563 968 aa16.34■□□□□ 0.21
PARD3B-201ENST00000349953 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
PARD3B-201ENST00000349953 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
PARD3B-201ENST00000349953 POLR3GLQ9BT43 218 aa16.33■□□□□ 0.2
PARD3B-201ENST00000349953 PTPRGP23470 1445 aa16.33■□□□□ 0.2
PARD3B-201ENST00000349953 PZPP20742 1482 aa16.32■□□□□ 0.2
PARD3B-201ENST00000349953 ABCA8O94911 1581 aa16.31■□□□□ 0.2
PARD3B-201ENST00000349953 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
PARD3B-201ENST00000349953 RPRD2Q5VT52 1461 aaKnown RBP16.29■□□□□ 0.2
PARD3B-201ENST00000349953 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
PARD3B-201ENST00000349953 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.2
PARD3B-201ENST00000349953 ABCC10Q5T3U5 1492 aa16.27■□□□□ 0.2
PARD3B-201ENST00000349953 NUP155O75694 1391 aa16.27■□□□□ 0.19
PARD3B-201ENST00000349953 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.19
PARD3B-201ENST00000349953 ANKRD50Q9ULJ7 1429 aa16.27■□□□□ 0.19
PARD3B-201ENST00000349953 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.19
PARD3B-201ENST00000349953 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
PARD3B-201ENST00000349953 FKBP8Q14318 412 aa16.25■□□□□ 0.19
PARD3B-201ENST00000349953 CHD1O14646 1710 aa16.25■□□□□ 0.19
PARD3B-201ENST00000349953 C9orf84Q5VXU9 1444 aa16.25■□□□□ 0.19
PARD3B-201ENST00000349953 ITSN2Q9NZM3 1697 aa16.25■□□□□ 0.19
PARD3B-201ENST00000349953 TSPY4P0CV99 314 aa16.25■□□□□ 0.19
PARD3B-201ENST00000349953 TSPY10P0CW01 314 aa16.25■□□□□ 0.19
PARD3B-201ENST00000349953 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
PARD3B-201ENST00000349953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
PARD3B-201ENST00000349953 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
PARD3B-201ENST00000349953 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
PARD3B-201ENST00000349953 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
PARD3B-201ENST00000349953 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.18
PARD3B-201ENST00000349953 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
PARD3B-201ENST00000349953 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
PARD3B-201ENST00000349953 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
PARD3B-201ENST00000349953 CROCC2H7BZ55 1655 aa16.19■□□□□ 0.18
PARD3B-201ENST00000349953 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
PARD3B-201ENST00000349953 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
PARD3B-201ENST00000349953 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
PARD3B-201ENST00000349953 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
PARD3B-201ENST00000349953 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
PARD3B-201ENST00000349953 SAMD9LQ8IVG5 1584 aa16.15■□□□□ 0.18
PARD3B-201ENST00000349953 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
PARD3B-201ENST00000349953 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
PARD3B-201ENST00000349953 TTC37Q6PGP7 1564 aa16.14■□□□□ 0.18
PARD3B-201ENST00000349953 PRKRIP1Q9H875 184 aaPredicted RBP16.14■□□□□ 0.17
PARD3B-201ENST00000349953 SPATA31E1Q6ZUB1 1445 aa16.14■□□□□ 0.17
PARD3B-201ENST00000349953 SYCP2Q9BX26 1530 aa16.14■□□□□ 0.17
PARD3B-201ENST00000349953 CDC42BPBQ9Y5S2 1711 aa16.13■□□□□ 0.17
PARD3B-201ENST00000349953 USP47Q96K76 1375 aa16.13■□□□□ 0.17
PARD3B-201ENST00000349953 ARHGAP5Q13017 1502 aa16.12■□□□□ 0.17
PARD3B-201ENST00000349953 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
PARD3B-201ENST00000349953 CARD11Q9BXL7 1154 aa16.1■□□□□ 0.17
PARD3B-201ENST00000349953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.1■□□□□ 0.17
PARD3B-201ENST00000349953 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
PARD3B-201ENST00000349953 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.16
PARD3B-201ENST00000349953 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
PARD3B-201ENST00000349953 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
PARD3B-201ENST00000349953 ARHGEF12Q9NZN5 1544 aa16.07■□□□□ 0.16
PARD3B-201ENST00000349953 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
PARD3B-201ENST00000349953 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
PARD3B-201ENST00000349953 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
PARD3B-201ENST00000349953 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
PARD3B-201ENST00000349953 TSHZ2Q9NRE2 1034 aa16.04■□□□□ 0.16
PARD3B-201ENST00000349953 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
PARD3B-201ENST00000349953 NEFLP07196 543 aa16.03■□□□□ 0.16
PARD3B-201ENST00000349953 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
PARD3B-201ENST00000349953 FAM135AQ9P2D6 1515 aa16.03■□□□□ 0.16
PARD3B-201ENST00000349953 ARHGEF5Q12774 1597 aa16.01■□□□□ 0.15
PARD3B-201ENST00000349953 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
PARD3B-201ENST00000349953 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
PARD3B-201ENST00000349953 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
PARD3B-201ENST00000349953 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms