RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 UACAQ9BZF9 1416 aa24.49■■□□□ 1.51
SMARCC2-202ENST00000347471 ARHGEF11O15085 1522 aa24.49■■□□□ 1.51
SMARCC2-202ENST00000347471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.48■■□□□ 1.513e-7■■■□□ 19.2
SMARCC2-202ENST00000347471 DAPK1P53355 1430 aa24.48■■□□□ 1.51
SMARCC2-202ENST00000347471 PPP1R15AO75807 674 aaPredicted RBP24.48■■□□□ 1.51
SMARCC2-202ENST00000347471 ABCC5O15440 1437 aa24.47■■□□□ 1.51
SMARCC2-202ENST00000347471 CENPBP07199 599 aaPredicted RBP24.46■■□□□ 1.51
SMARCC2-202ENST00000347471 CHD1O14646 1710 aa24.46■■□□□ 1.51
SMARCC2-202ENST00000347471 GPATCH8Q9UKJ3 1502 aaKnown RBP24.44■■□□□ 1.5
SMARCC2-202ENST00000347471 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
SMARCC2-202ENST00000347471 KIF14Q15058 1648 aa24.43■■□□□ 1.5
SMARCC2-202ENST00000347471 CAMSAP2Q08AD1 1489 aa24.4■■□□□ 1.5
SMARCC2-202ENST00000347471 TCOF1Q13428 1488 aaKnown RBP24.39■■□□□ 1.5
SMARCC2-202ENST00000347471 CNGB1Q14028 1251 aaPredicted RBP24.38■■□□□ 1.49
SMARCC2-202ENST00000347471 PKD2Q13563 968 aa24.36■■□□□ 1.49
SMARCC2-202ENST00000347471 POLR3GLQ9BT43 218 aa24.36■■□□□ 1.49
SMARCC2-202ENST00000347471 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
SMARCC2-202ENST00000347471 ANKRD30AQ9BXX3 1397 aa24.34■■□□□ 1.49
SMARCC2-202ENST00000347471 KDM6BO15054 1643 aa24.33■■□□□ 1.49
SMARCC2-202ENST00000347471 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
SMARCC2-202ENST00000347471 ABCA8O94911 1581 aa24.32■■□□□ 1.48
SMARCC2-202ENST00000347471 NUP155O75694 1391 aa24.3■■□□□ 1.48
SMARCC2-202ENST00000347471 ACIN1Q9UKV3 1341 aaKnown RBP24.3■■□□□ 1.48
SMARCC2-202ENST00000347471 TIMELESSQ9UNS1 1208 aa24.3■■□□□ 1.48
SMARCC2-202ENST00000347471 KDM2AQ9Y2K7 1162 aa24.29■■□□□ 1.48
SMARCC2-202ENST00000347471 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
SMARCC2-202ENST00000347471 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
SMARCC2-202ENST00000347471 NCOA1Q15788 1441 aa24.26■■□□□ 1.47
SMARCC2-202ENST00000347471 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
SMARCC2-202ENST00000347471 ANKRD50Q9ULJ7 1429 aa24.24■■□□□ 1.47
SMARCC2-202ENST00000347471 C9orf84Q5VXU9 1444 aa24.24■■□□□ 1.47
SMARCC2-202ENST00000347471 KIF15Q9NS87 1388 aa24.23■■□□□ 1.47
SMARCC2-202ENST00000347471 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
SMARCC2-202ENST00000347471 ARHGAP5Q13017 1502 aa24.22■■□□□ 1.47
SMARCC2-202ENST00000347471 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
SMARCC2-202ENST00000347471 RGL3Q3MIN7 710 aa24.21■■□□□ 1.47
SMARCC2-202ENST00000347471 AFAP1Q8N556 730 aa24.19■■□□□ 1.46
SMARCC2-202ENST00000347471 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
SMARCC2-202ENST00000347471 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
SMARCC2-202ENST00000347471 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
SMARCC2-202ENST00000347471 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
SMARCC2-202ENST00000347471 EIF4G2P78344 907 aaKnown RBP eCLIP24.14■■□□□ 1.462e-6■■■■□ 25.7
SMARCC2-202ENST00000347471 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
SMARCC2-202ENST00000347471 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
SMARCC2-202ENST00000347471 ITSN2Q9NZM3 1697 aa24.11■■□□□ 1.45
SMARCC2-202ENST00000347471 ANP32CO43423 234 aa24.11■■□□□ 1.45
SMARCC2-202ENST00000347471 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
SMARCC2-202ENST00000347471 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
SMARCC2-202ENST00000347471 CYB5RLQ6IPT4 315 aa24.1■■□□□ 1.45
SMARCC2-202ENST00000347471 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
SMARCC2-202ENST00000347471 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
SMARCC2-202ENST00000347471 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
SMARCC2-202ENST00000347471 GCC2Q8IWJ2 1684 aa24.05■■□□□ 1.44
SMARCC2-202ENST00000347471 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
SMARCC2-202ENST00000347471 CCDC141Q6ZP82 1450 aa24.04■■□□□ 1.44
SMARCC2-202ENST00000347471 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
SMARCC2-202ENST00000347471 TTC37Q6PGP7 1564 aa24.02■■□□□ 1.44
SMARCC2-202ENST00000347471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.02■■□□□ 1.446e-6■■□□□ 13.3
SMARCC2-202ENST00000347471 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
SMARCC2-202ENST00000347471 SHROOM2Q13796 1616 aa24■■□□□ 1.43
SMARCC2-202ENST00000347471 PZPP20742 1482 aa24■■□□□ 1.43
SMARCC2-202ENST00000347471 MBD5Q9P267 1494 aa23.99■■□□□ 1.43
SMARCC2-202ENST00000347471 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
SMARCC2-202ENST00000347471 ADCY10Q96PN6 1610 aa23.98■■□□□ 1.43
SMARCC2-202ENST00000347471 KIF3BO15066 747 aa23.96■■□□□ 1.43
SMARCC2-202ENST00000347471 SAMD9LQ8IVG5 1584 aa23.96■■□□□ 1.43
SMARCC2-202ENST00000347471 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
SMARCC2-202ENST00000347471 CARD11Q9BXL7 1154 aa23.94■■□□□ 1.42
SMARCC2-202ENST00000347471 PLEKHH2Q8IVE3 1493 aa23.93■■□□□ 1.42
SMARCC2-202ENST00000347471 PLCH2O75038 1416 aa23.93■■□□□ 1.42
SMARCC2-202ENST00000347471 ADGRL2O95490 1459 aa23.92■■□□□ 1.42
SMARCC2-202ENST00000347471 RPRD2Q5VT52 1461 aaKnown RBP23.92■■□□□ 1.42
SMARCC2-202ENST00000347471 WASHC2AQ641Q2 1341 aa23.92■■□□□ 1.42
SMARCC2-202ENST00000347471 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
SMARCC2-202ENST00000347471 ZCCHC11Q5TAX3 1644 aaKnown RBP23.9■■□□□ 1.42
SMARCC2-202ENST00000347471 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
SMARCC2-202ENST00000347471 ASXL2Q76L83 1435 aa23.9■■□□□ 1.42
SMARCC2-202ENST00000347471 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.42
SMARCC2-202ENST00000347471 SCAPERQ9BY12 1400 aa23.89■■□□□ 1.41
SMARCC2-202ENST00000347471 ARHGEF12Q9NZN5 1544 aa23.88■■□□□ 1.41
SMARCC2-202ENST00000347471 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
SMARCC2-202ENST00000347471 CDC42BPBQ9Y5S2 1711 aa23.87■■□□□ 1.41
SMARCC2-202ENST00000347471 GGT6Q6P531 493 aa23.86■■□□□ 1.41
SMARCC2-202ENST00000347471 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
SMARCC2-202ENST00000347471 SHANK2Q9UPX8 1470 aa23.85■■□□□ 1.41
SMARCC2-202ENST00000347471 PREX2Q70Z35 1606 aa23.84■■□□□ 1.41
SMARCC2-202ENST00000347471 CCDC144AA2RUR9 1427 aa23.83■■□□□ 1.41
SMARCC2-202ENST00000347471 FANCAO15360 1455 aa23.82■■□□□ 1.4
SMARCC2-202ENST00000347471 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
SMARCC2-202ENST00000347471 RAPGEF3O95398 923 aa23.81■■□□□ 1.4
SMARCC2-202ENST00000347471 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
SMARCC2-202ENST00000347471 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
SMARCC2-202ENST00000347471 USP47Q96K76 1375 aa23.77■■□□□ 1.4
SMARCC2-202ENST00000347471 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
SMARCC2-202ENST00000347471 TEX14Q8IWB6 1497 aa23.77■■□□□ 1.4
SMARCC2-202ENST00000347471 MYO5CQ9NQX4 1742 aa23.77■■□□□ 1.4
SMARCC2-202ENST00000347471 ADGRL1O94910 1474 aa23.76■■□□□ 1.39
SMARCC2-202ENST00000347471 CROCC2H7BZ55 1655 aa23.76■■□□□ 1.39
SMARCC2-202ENST00000347471 NBPF1Q3BBV0 1214 aa23.76■■□□□ 1.39
SMARCC2-202ENST00000347471 FAM9BQ8IZU0 186 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms