RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
CSNK1G3-201ENST00000345990 PKD2Q13563 968 aa18.82■□□□□ 0.6
CSNK1G3-201ENST00000345990 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
CSNK1G3-201ENST00000345990 SUPT6HQ7KZ85 1726 aaKnown RBP18.8■□□□□ 0.6
CSNK1G3-201ENST00000345990 PCF11O94913 1555 aaKnown RBP18.78■□□□□ 0.6
CSNK1G3-201ENST00000345990 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
CSNK1G3-201ENST00000345990 NUP160Q12769 1436 aa18.78■□□□□ 0.6
CSNK1G3-201ENST00000345990 KIF3BO15066 747 aa18.77■□□□□ 0.6
CSNK1G3-201ENST00000345990 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
CSNK1G3-201ENST00000345990 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
CSNK1G3-201ENST00000345990 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
CSNK1G3-201ENST00000345990 GGT6Q6P531 493 aa18.77■□□□□ 0.59
CSNK1G3-201ENST00000345990 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
CSNK1G3-201ENST00000345990 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
CSNK1G3-201ENST00000345990 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
CSNK1G3-201ENST00000345990 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
CSNK1G3-201ENST00000345990 NEFMP07197 916 aa18.71■□□□□ 0.59
CSNK1G3-201ENST00000345990 CARD11Q9BXL7 1154 aa18.71■□□□□ 0.59
CSNK1G3-201ENST00000345990 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
CSNK1G3-201ENST00000345990 KIF15Q9NS87 1388 aa18.69■□□□□ 0.58
CSNK1G3-201ENST00000345990 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
CSNK1G3-201ENST00000345990 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
CSNK1G3-201ENST00000345990 KIF14Q15058 1648 aa18.67■□□□□ 0.58
CSNK1G3-201ENST00000345990 KIAA0556O60303 1618 aa18.66■□□□□ 0.58
CSNK1G3-201ENST00000345990 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
CSNK1G3-201ENST00000345990 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
CSNK1G3-201ENST00000345990 ANKRD50Q9ULJ7 1429 aa18.65■□□□□ 0.58
CSNK1G3-201ENST00000345990 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
CSNK1G3-201ENST00000345990 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
CSNK1G3-201ENST00000345990 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
CSNK1G3-201ENST00000345990 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
CSNK1G3-201ENST00000345990 MLECQ14165 292 aa18.62■□□□□ 0.57
CSNK1G3-201ENST00000345990 ROCK1Q13464 1354 aa18.62■□□□□ 0.57
CSNK1G3-201ENST00000345990 C9orf84Q5VXU9 1444 aa18.6■□□□□ 0.57
CSNK1G3-201ENST00000345990 CCDC144AA2RUR9 1427 aa18.6■□□□□ 0.57
CSNK1G3-201ENST00000345990 HFM1A2PYH4 1435 aa18.59■□□□□ 0.57
CSNK1G3-201ENST00000345990 DAPK1P53355 1430 aa18.57■□□□□ 0.56
CSNK1G3-201ENST00000345990 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
CSNK1G3-201ENST00000345990 TMF1P82094 1093 aa18.54■□□□□ 0.56
CSNK1G3-201ENST00000345990 NUP153P49790 1475 aaKnown RBP18.53■□□□□ 0.56
CSNK1G3-201ENST00000345990 CD109Q6YHK3 1445 aa18.53■□□□□ 0.56
CSNK1G3-201ENST00000345990 POGKQ9P215 609 aa18.53■□□□□ 0.56
CSNK1G3-201ENST00000345990 ATP10BO94823 1461 aa18.53■□□□□ 0.56
CSNK1G3-201ENST00000345990 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
CSNK1G3-201ENST00000345990 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.55
CSNK1G3-201ENST00000345990 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.55
CSNK1G3-201ENST00000345990 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CSNK1G3-201ENST00000345990 FOXD1Q16676 465 aa18.51■□□□□ 0.55
CSNK1G3-201ENST00000345990 DISP1Q96F81 1524 aa18.51■□□□□ 0.55
CSNK1G3-201ENST00000345990 AFAP1Q8N556 730 aa18.5■□□□□ 0.55
CSNK1G3-201ENST00000345990 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
CSNK1G3-201ENST00000345990 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
CSNK1G3-201ENST00000345990 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
CSNK1G3-201ENST00000345990 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
CSNK1G3-201ENST00000345990 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
CSNK1G3-201ENST00000345990 ABCC2Q92887 1545 aa18.47■□□□□ 0.55
CSNK1G3-201ENST00000345990 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
CSNK1G3-201ENST00000345990 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
CSNK1G3-201ENST00000345990 EID1Q9Y6B2 187 aa18.46■□□□□ 0.55
CSNK1G3-201ENST00000345990 AKNAQ7Z591 1439 aa18.46■□□□□ 0.55
CSNK1G3-201ENST00000345990 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
CSNK1G3-201ENST00000345990 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
CSNK1G3-201ENST00000345990 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
CSNK1G3-201ENST00000345990 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
CSNK1G3-201ENST00000345990 C14orf37Q86TY3 774 aa18.43■□□□□ 0.54
CSNK1G3-201ENST00000345990 GPATCH8Q9UKJ3 1502 aaKnown RBP18.42■□□□□ 0.54
CSNK1G3-201ENST00000345990 PLCH2O75038 1416 aa18.42■□□□□ 0.54
CSNK1G3-201ENST00000345990 ADGRL1O94910 1474 aa18.42■□□□□ 0.54
CSNK1G3-201ENST00000345990 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
CSNK1G3-201ENST00000345990 ABCC5O15440 1437 aa18.41■□□□□ 0.54
CSNK1G3-201ENST00000345990 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
CSNK1G3-201ENST00000345990 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
CSNK1G3-201ENST00000345990 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
CSNK1G3-201ENST00000345990 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
CSNK1G3-201ENST00000345990 NAIPQ13075 1403 aa18.4■□□□□ 0.54
CSNK1G3-201ENST00000345990 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
CSNK1G3-201ENST00000345990 POGZQ7Z3K3 1410 aa18.39■□□□□ 0.53
CSNK1G3-201ENST00000345990 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
CSNK1G3-201ENST00000345990 FANCAO15360 1455 aa18.39■□□□□ 0.53
CSNK1G3-201ENST00000345990 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.53
CSNK1G3-201ENST00000345990 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.38■□□□□ 0.53
CSNK1G3-201ENST00000345990 DENND4BO75064 1496 aaPredicted RBP18.37■□□□□ 0.53
CSNK1G3-201ENST00000345990 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
CSNK1G3-201ENST00000345990 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
CSNK1G3-201ENST00000345990 TCOF1Q13428 1488 aaKnown RBP18.34■□□□□ 0.53
CSNK1G3-201ENST00000345990 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
CSNK1G3-201ENST00000345990 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
CSNK1G3-201ENST00000345990 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
CSNK1G3-201ENST00000345990 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
CSNK1G3-201ENST00000345990 MIER1Q8N108 512 aa18.3■□□□□ 0.52
CSNK1G3-201ENST00000345990 RAPGEF3O95398 923 aa18.28■□□□□ 0.52
CSNK1G3-201ENST00000345990 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
CSNK1G3-201ENST00000345990 CCER2I3L3R5 266 aa18.27■□□□□ 0.51
CSNK1G3-201ENST00000345990 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.51
CSNK1G3-201ENST00000345990 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
CSNK1G3-201ENST00000345990 CHD1O14646 1710 aa18.26■□□□□ 0.51
CSNK1G3-201ENST00000345990 ABCA8O94911 1581 aa18.25■□□□□ 0.51
CSNK1G3-201ENST00000345990 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
CSNK1G3-201ENST00000345990 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
CSNK1G3-201ENST00000345990 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms