RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
CASC4-202ENST00000345795 MLECQ14165 292 aa18.11■□□□□ 0.49
CASC4-202ENST00000345795 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
CASC4-202ENST00000345795 B4GALNT3Q6L9W6 998 aa18.11■□□□□ 0.49
CASC4-202ENST00000345795 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
CASC4-202ENST00000345795 AFAP1Q8N556 730 aa18.1■□□□□ 0.49
CASC4-202ENST00000345795 FYCO1Q9BQS8 1478 aa18.1■□□□□ 0.49
CASC4-202ENST00000345795 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
CASC4-202ENST00000345795 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
CASC4-202ENST00000345795 KIF3BO15066 747 aa18.06■□□□□ 0.48
CASC4-202ENST00000345795 NAIPQ13075 1403 aa18.05■□□□□ 0.48
CASC4-202ENST00000345795 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
CASC4-202ENST00000345795 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
CASC4-202ENST00000345795 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.48
CASC4-202ENST00000345795 UACAQ9BZF9 1416 aa18.02■□□□□ 0.47
CASC4-202ENST00000345795 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.47
CASC4-202ENST00000345795 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
CASC4-202ENST00000345795 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
CASC4-202ENST00000345795 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
CASC4-202ENST00000345795 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
CASC4-202ENST00000345795 MAPKBP1O60336 1514 aa17.97■□□□□ 0.47
CASC4-202ENST00000345795 STK26Q9P289 416 aa17.96■□□□□ 0.47
CASC4-202ENST00000345795 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
CASC4-202ENST00000345795 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
CASC4-202ENST00000345795 KIF21AQ7Z4S6 1674 aa17.95■□□□□ 0.46
CASC4-202ENST00000345795 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
CASC4-202ENST00000345795 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
CASC4-202ENST00000345795 PRKRIP1Q9H875 184 aaPredicted RBP17.94■□□□□ 0.46
CASC4-202ENST00000345795 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
CASC4-202ENST00000345795 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
CASC4-202ENST00000345795 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
CASC4-202ENST00000345795 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
CASC4-202ENST00000345795 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
CASC4-202ENST00000345795 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
CASC4-202ENST00000345795 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
CASC4-202ENST00000345795 EFCAB5A4FU69 1503 aa17.91■□□□□ 0.46
CASC4-202ENST00000345795 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
CASC4-202ENST00000345795 PPM1GO15355 546 aaPredicted RBP17.9■□□□□ 0.46
CASC4-202ENST00000345795 USP47Q96K76 1375 aa17.9■□□□□ 0.46
CASC4-202ENST00000345795 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
CASC4-202ENST00000345795 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
CASC4-202ENST00000345795 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
CASC4-202ENST00000345795 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
CASC4-202ENST00000345795 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
CASC4-202ENST00000345795 DAPK1P53355 1430 aa17.86■□□□□ 0.45
CASC4-202ENST00000345795 KIAA0586Q9BVV6 1533 aa17.86■□□□□ 0.45
CASC4-202ENST00000345795 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
CASC4-202ENST00000345795 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
CASC4-202ENST00000345795 ABCC5O15440 1437 aa17.85■□□□□ 0.45
CASC4-202ENST00000345795 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
CASC4-202ENST00000345795 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
CASC4-202ENST00000345795 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
CASC4-202ENST00000345795 SOX12O15370 315 aa17.83■□□□□ 0.44
CASC4-202ENST00000345795 TROQ12816 1431 aaPredicted RBP17.82■□□□□ 0.44
CASC4-202ENST00000345795 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
CASC4-202ENST00000345795 PANK3Q9H999 370 aa17.82■□□□□ 0.44
CASC4-202ENST00000345795 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
CASC4-202ENST00000345795 CCDC7Q96M83 1385 aa17.81■□□□□ 0.44
CASC4-202ENST00000345795 EHBP1L1Q8N3D4 1523 aa17.81■□□□□ 0.44
CASC4-202ENST00000345795 PLIN1O60240 522 aa17.81■□□□□ 0.44
CASC4-202ENST00000345795 PTPN23Q9H3S7 1636 aa17.81■□□□□ 0.44
CASC4-202ENST00000345795 CUL7Q14999 1698 aa17.8■□□□□ 0.44
CASC4-202ENST00000345795 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
CASC4-202ENST00000345795 TMEM132EQ6IEE7 984 aa17.8■□□□□ 0.44
CASC4-202ENST00000345795 RAPGEF3O95398 923 aa17.79■□□□□ 0.44
CASC4-202ENST00000345795 NBR1Q14596 966 aa17.79■□□□□ 0.44
CASC4-202ENST00000345795 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
CASC4-202ENST00000345795 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
CASC4-202ENST00000345795 TMF1P82094 1093 aa17.77■□□□□ 0.44
CASC4-202ENST00000345795 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
CASC4-202ENST00000345795 C9orf84Q5VXU9 1444 aa17.76■□□□□ 0.43
CASC4-202ENST00000345795 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
CASC4-202ENST00000345795 RBM19Q9Y4C8 960 aaKnown RBP17.74■□□□□ 0.43
CASC4-202ENST00000345795 WASHC2CQ9Y4E1 1318 aa17.73■□□□□ 0.43
CASC4-202ENST00000345795 CFAP70Q5T0N1 1121 aa17.73■□□□□ 0.43
CASC4-202ENST00000345795 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
CASC4-202ENST00000345795 ARHGAP5Q13017 1502 aa17.73■□□□□ 0.43
CASC4-202ENST00000345795 ANKRD30BQ9BXX2 1392 aa17.73■□□□□ 0.43
CASC4-202ENST00000345795 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
CASC4-202ENST00000345795 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
CASC4-202ENST00000345795 CAMSAP2Q08AD1 1489 aa17.72■□□□□ 0.43
CASC4-202ENST00000345795 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
CASC4-202ENST00000345795 NCOA1Q15788 1441 aa17.7■□□□□ 0.42
CASC4-202ENST00000345795 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
CASC4-202ENST00000345795 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
CASC4-202ENST00000345795 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
CASC4-202ENST00000345795 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
CASC4-202ENST00000345795 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
CASC4-202ENST00000345795 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
CASC4-202ENST00000345795 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
CASC4-202ENST00000345795 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
CASC4-202ENST00000345795 POGKQ9P215 609 aa17.67■□□□□ 0.42
CASC4-202ENST00000345795 ATP10BO94823 1461 aa17.67■□□□□ 0.42
CASC4-202ENST00000345795 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
CASC4-202ENST00000345795 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
CASC4-202ENST00000345795 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
CASC4-202ENST00000345795 SKAP1Q86WV1 359 aa17.66■□□□□ 0.42
CASC4-202ENST00000345795 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
CASC4-202ENST00000345795 RGS3P49796 1198 aa17.65■□□□□ 0.42
CASC4-202ENST00000345795 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms