RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
CFAP54-201ENST00000342887 ABCC5O15440 1437 aa12.11□□□□□ -0.47
CFAP54-201ENST00000342887 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
CFAP54-201ENST00000342887 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
CFAP54-201ENST00000342887 NEUROD1Q13562 356 aa12.1□□□□□ -0.47
CFAP54-201ENST00000342887 GPATCH8Q9UKJ3 1502 aaKnown RBP12.1□□□□□ -0.47
CFAP54-201ENST00000342887 NEURL4Q96JN8 1562 aa12.1□□□□□ -0.47
CFAP54-201ENST00000342887 KDM5CP41229 1560 aa12.09□□□□□ -0.47
CFAP54-201ENST00000342887 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
CFAP54-201ENST00000342887 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
CFAP54-201ENST00000342887 RPRD2Q5VT52 1461 aaKnown RBP12.09□□□□□ -0.47
CFAP54-201ENST00000342887 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
CFAP54-201ENST00000342887 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
CFAP54-201ENST00000342887 MYO5CQ9NQX4 1742 aa12.08□□□□□ -0.48
CFAP54-201ENST00000342887 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
CFAP54-201ENST00000342887 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
CFAP54-201ENST00000342887 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
CFAP54-201ENST00000342887 ARHGEF12Q9NZN5 1544 aa12.04□□□□□ -0.48
CFAP54-201ENST00000342887 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
CFAP54-201ENST00000342887 UHRF1BP1LA0JNW5 1464 aa12.03□□□□□ -0.48
CFAP54-201ENST00000342887 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
CFAP54-201ENST00000342887 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
CFAP54-201ENST00000342887 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
CFAP54-201ENST00000342887 IFT172Q9UG01 1749 aa12.02□□□□□ -0.48
CFAP54-201ENST00000342887 VWDEQ8N2E2 1590 aa12.02□□□□□ -0.49
CFAP54-201ENST00000342887 MIER1Q8N108 512 aa12.01□□□□□ -0.49
CFAP54-201ENST00000342887 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
CFAP54-201ENST00000342887 ATP10BO94823 1461 aa12.01□□□□□ -0.49
CFAP54-201ENST00000342887 ABCA9Q8IUA7 1624 aa12.01□□□□□ -0.49
CFAP54-201ENST00000342887 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
CFAP54-201ENST00000342887 ATP10AO60312 1499 aa12□□□□□ -0.49
CFAP54-201ENST00000342887 ZCCHC11Q5TAX3 1644 aaKnown RBP11.99□□□□□ -0.49
CFAP54-201ENST00000342887 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
CFAP54-201ENST00000342887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
CFAP54-201ENST00000342887 APLP2Q06481 763 aa11.98□□□□□ -0.49
CFAP54-201ENST00000342887 CEP152O94986 1710 aa11.97□□□□□ -0.49
CFAP54-201ENST00000342887 ABCC2Q92887 1545 aa11.97□□□□□ -0.49
CFAP54-201ENST00000342887 MTUS2Q5JR59 1369 aa11.96□□□□□ -0.5
CFAP54-201ENST00000342887 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.5
CFAP54-201ENST00000342887 EIF2AK4Q9P2K8 1649 aaKnown RBP11.94□□□□□ -0.5
CFAP54-201ENST00000342887 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
CFAP54-201ENST00000342887 ERCC6L2Q5T890 1561 aa11.94□□□□□ -0.5
CFAP54-201ENST00000342887 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
CFAP54-201ENST00000342887 MROH1Q8NDA8 1641 aa11.94□□□□□ -0.5
CFAP54-201ENST00000342887 SPHKAPQ2M3C7 1700 aa11.93□□□□□ -0.5
CFAP54-201ENST00000342887 ABCC1P33527 1531 aa11.92□□□□□ -0.5
CFAP54-201ENST00000342887 PRG4Q92954 1404 aaPredicted RBP11.91□□□□□ -0.5
CFAP54-201ENST00000342887 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.5
CFAP54-201ENST00000342887 PRDM15P57071 1507 aaPredicted RBP11.89□□□□□ -0.51
CFAP54-201ENST00000342887 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
CFAP54-201ENST00000342887 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
CFAP54-201ENST00000342887 MYO3AQ8NEV4 1616 aa11.88□□□□□ -0.51
CFAP54-201ENST00000342887 WDR7Q9Y4E6 1490 aa11.88□□□□□ -0.51
CFAP54-201ENST00000342887 MYOM1P52179 1685 aa11.87□□□□□ -0.51
CFAP54-201ENST00000342887 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
CFAP54-201ENST00000342887 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
CFAP54-201ENST00000342887 MADDQ8WXG6 1647 aa11.85□□□□□ -0.51
CFAP54-201ENST00000342887 ZFYVE16Q7Z3T8 1539 aa11.84□□□□□ -0.51
CFAP54-201ENST00000342887 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
CFAP54-201ENST00000342887 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
CFAP54-201ENST00000342887 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
CFAP54-201ENST00000342887 BCL11AQ9H165 835 aa11.83□□□□□ -0.52
CFAP54-201ENST00000342887 TET3O43151 1660 aa11.83□□□□□ -0.52
CFAP54-201ENST00000342887 CARMIL2Q6F5E8 1435 aa11.82□□□□□ -0.52
CFAP54-201ENST00000342887 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
CFAP54-201ENST00000342887 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
CFAP54-201ENST00000342887 CCDC141Q6ZP82 1450 aa11.81□□□□□ -0.52
CFAP54-201ENST00000342887 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
CFAP54-201ENST00000342887 CNTLNQ9NXG0 1405 aa11.81□□□□□ -0.52
CFAP54-201ENST00000342887 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
CFAP54-201ENST00000342887 DHX29Q7Z478 1369 aaKnown RBP11.8□□□□□ -0.52
CFAP54-201ENST00000342887 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
CFAP54-201ENST00000342887 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
CFAP54-201ENST00000342887 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
CFAP54-201ENST00000342887 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
CFAP54-201ENST00000342887 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
CFAP54-201ENST00000342887 LMTK2Q8IWU2 1503 aa11.79□□□□□ -0.52
CFAP54-201ENST00000342887 TRPM2O94759 1503 aa11.78□□□□□ -0.52
CFAP54-201ENST00000342887 ERBINQ96RT1 1412 aa11.78□□□□□ -0.52
CFAP54-201ENST00000342887 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
CFAP54-201ENST00000342887 KIDINS220Q9ULH0 1771 aa11.77□□□□□ -0.53
CFAP54-201ENST00000342887 PIK3C2BO00750 1634 aa11.76□□□□□ -0.53
CFAP54-201ENST00000342887 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
CFAP54-201ENST00000342887 NRXN1Q9ULB1 1477 aa11.75□□□□□ -0.53
CFAP54-201ENST00000342887 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
CFAP54-201ENST00000342887 WASHC2AQ641Q2 1341 aa11.74□□□□□ -0.53
CFAP54-201ENST00000342887 MROH2AA6NES4 1674 aa11.74□□□□□ -0.53
CFAP54-201ENST00000342887 RTEL1-TNFRSF6BF6WH68 1400 aa11.74□□□□□ -0.53
CFAP54-201ENST00000342887 PTPRTO14522 1441 aa11.74□□□□□ -0.53
CFAP54-201ENST00000342887 RANGAP1P46060 587 aaPredicted RBP11.74□□□□□ -0.53
CFAP54-201ENST00000342887 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
CFAP54-201ENST00000342887 CLTCL1P53675 1640 aa11.73□□□□□ -0.53
CFAP54-201ENST00000342887 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
CFAP54-201ENST00000342887 INSRP06213 1382 aa11.72□□□□□ -0.53
CFAP54-201ENST00000342887 ANKRD50Q9ULJ7 1429 aa11.72□□□□□ -0.53
CFAP54-201ENST00000342887 FRMPD1Q5SYB0 1578 aa11.71□□□□□ -0.53
CFAP54-201ENST00000342887 PPLO60437 1756 aa11.71□□□□□ -0.53
CFAP54-201ENST00000342887 CCDC7Q96M83 1385 aa11.71□□□□□ -0.53
CFAP54-201ENST00000342887 PLCH2O75038 1416 aa11.71□□□□□ -0.54
CFAP54-201ENST00000342887 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms