RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 ARID4BQ4LE39 1312 aaPredicted RBP26.03■■□□□ 1.76
SOX12-201ENST00000342665 MORC1Q86VD1 984 aa26.01■■□□□ 1.75
SOX12-201ENST00000342665 PNNQ9H307 717 aaKnown RBP26■■□□□ 1.75
SOX12-201ENST00000342665 LAS1LQ9Y4W2 734 aaKnown RBP26■■□□□ 1.75
SOX12-201ENST00000342665 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.75
SOX12-201ENST00000342665 CHMP4BQ9H444 224 aaKnown RBP25.99■■□□□ 1.75
SOX12-201ENST00000342665 GGT6Q6P531 493 aa25.98■■□□□ 1.75
SOX12-201ENST00000342665 RCAN3Q9UKA8 241 aa25.97■■□□□ 1.75
SOX12-201ENST00000342665 GOLGA6L22H0YM25 854 aa25.96■■□□□ 1.75
SOX12-201ENST00000342665 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.75
SOX12-201ENST00000342665 ZBTB7CA1YPR0 619 aa25.95■■□□□ 1.74
SOX12-201ENST00000342665 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
SOX12-201ENST00000342665 SRPK2P78362 688 aaKnown RBP25.94■■□□□ 1.74
SOX12-201ENST00000342665 KIF21BO75037 1637 aa25.93■■□□□ 1.74
SOX12-201ENST00000342665 NLRP13Q86W25 1043 aa25.93■■□□□ 1.74
SOX12-201ENST00000342665 TSHZ2Q9NRE2 1034 aa25.9■■□□□ 1.74
SOX12-201ENST00000342665 PLEKHG5O94827 1062 aa25.88■■□□□ 1.73
SOX12-201ENST00000342665 CASC1Q6TDU7 716 aa25.87■■□□□ 1.73
SOX12-201ENST00000342665 KIF3BO15066 747 aa25.86■■□□□ 1.73
SOX12-201ENST00000342665 SAFB2Q14151 953 aaKnown RBP eCLIP25.86■■□□□ 1.73
SOX12-201ENST00000342665 HDGFP51858 240 aaKnown RBP25.85■■□□□ 1.73
SOX12-201ENST00000342665 PRKRIP1Q9H875 184 aaPredicted RBP25.85■■□□□ 1.73
SOX12-201ENST00000342665 PDE3BQ13370 1112 aa25.85■■□□□ 1.73
SOX12-201ENST00000342665 SPAG9O60271 1321 aaKnown RBP25.83■■□□□ 1.73
SOX12-201ENST00000342665 ST20-MTHFSA0A0A6YYL1 179 aa25.83■■□□□ 1.73
SOX12-201ENST00000342665 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.72
SOX12-201ENST00000342665 NCLP19338 710 aaKnown RBP25.83■■□□□ 1.72
SOX12-201ENST00000342665 FGD6Q6ZV73 1430 aa25.81■■□□□ 1.72
SOX12-201ENST00000342665 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
SOX12-201ENST00000342665 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
SOX12-201ENST00000342665 TRIM44Q96DX7 344 aaPredicted RBP25.81■■□□□ 1.72
SOX12-201ENST00000342665 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
SOX12-201ENST00000342665 EIF3AQ14152 1382 aaKnown RBP25.8■■□□□ 1.72
SOX12-201ENST00000342665 STK26Q9P289 416 aa25.79■■□□□ 1.72
SOX12-201ENST00000342665 LRRC9Q6ZRR7 1453 aa25.78■■□□□ 1.72
SOX12-201ENST00000342665 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
SOX12-201ENST00000342665 U2AF1L5P0DN76 240 aaPredicted RBP25.76■■□□□ 1.72
SOX12-201ENST00000342665 U2AF1Q01081 240 aaKnown RBP eCLIP25.76■■□□□ 1.72
SOX12-201ENST00000342665 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.72
SOX12-201ENST00000342665 MYOM3Q5VTT5 1437 aa25.76■■□□□ 1.71
SOX12-201ENST00000342665 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
SOX12-201ENST00000342665 CCDC144AA2RUR9 1427 aa25.75■■□□□ 1.71
SOX12-201ENST00000342665 MLECQ14165 292 aa25.75■■□□□ 1.71
SOX12-201ENST00000342665 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
SOX12-201ENST00000342665 HAP1P54257 671 aaPredicted RBP25.74■■□□□ 1.71
SOX12-201ENST00000342665 MYBBP1AQ9BQG0 1328 aaKnown RBP25.74■■□□□ 1.71
SOX12-201ENST00000342665 UACAQ9BZF9 1416 aa25.72■■□□□ 1.71
SOX12-201ENST00000342665 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
SOX12-201ENST00000342665 IPO8O15397 1037 aaKnown RBP25.71■■□□□ 1.71
SOX12-201ENST00000342665 GLIPR1L2Q4G1C9 344 aa25.71■■□□□ 1.71
SOX12-201ENST00000342665 PTPRGP23470 1445 aa25.71■■□□□ 1.71
SOX12-201ENST00000342665 SYNJ1O43426 1573 aa25.7■■□□□ 1.71
SOX12-201ENST00000342665 USP47Q96K76 1375 aa25.7■■□□□ 1.7
SOX12-201ENST00000342665 ZBED9Q6R2W3 1325 aa25.68■■□□□ 1.7
SOX12-201ENST00000342665 CASKIN1Q8WXD9 1431 aa25.68■■□□□ 1.7
SOX12-201ENST00000342665 CFTRP13569 1480 aa25.68■■□□□ 1.7
SOX12-201ENST00000342665 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
SOX12-201ENST00000342665 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
SOX12-201ENST00000342665 LMOD2Q6P5Q4 547 aa25.66■■□□□ 1.7
SOX12-201ENST00000342665 PRXQ9BXM0 1461 aa25.65■■□□□ 1.7
SOX12-201ENST00000342665 PANK3Q9H999 370 aa25.65■■□□□ 1.7
SOX12-201ENST00000342665 CUX1P39880 1505 aa25.65■■□□□ 1.7
SOX12-201ENST00000342665 RWDD1Q9H446 243 aaPredicted RBP25.64■■□□□ 1.69
SOX12-201ENST00000342665 A0A0G2JS52 829 aa25.63■■□□□ 1.69
SOX12-201ENST00000342665 CALD1Q05682 793 aaKnown RBP25.63■■□□□ 1.69
SOX12-201ENST00000342665 HSCBQ8IWL3 235 aa25.62■■□□□ 1.69
SOX12-201ENST00000342665 WASHC2CQ9Y4E1 1318 aa25.61■■□□□ 1.69
SOX12-201ENST00000342665 SOX12O15370 315 aa25.61■■□□□ 1.69
SOX12-201ENST00000342665 TERF2IPQ9NYB0 399 aa25.61■■□□□ 1.69
SOX12-201ENST00000342665 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
SOX12-201ENST00000342665 DEKP35659 375 aaKnown RBP25.59■■□□□ 1.69
SOX12-201ENST00000342665 CFAP44Q96MT7 982 aa25.58■■□□□ 1.69
SOX12-201ENST00000342665 CCDC146Q8IYE0 955 aa25.57■■□□□ 1.68
SOX12-201ENST00000342665 NCOA2Q15596 1464 aa25.57■■□□□ 1.68
SOX12-201ENST00000342665 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
SOX12-201ENST00000342665 RTF1Q92541 710 aaKnown RBP25.56■■□□□ 1.68
SOX12-201ENST00000342665 IPO9Q96P70 1041 aaKnown RBP25.56■■□□□ 1.68
SOX12-201ENST00000342665 FYCO1Q9BQS8 1478 aa25.55■■□□□ 1.68
SOX12-201ENST00000342665 CCDC7Q96M83 1385 aa25.55■■□□□ 1.68
SOX12-201ENST00000342665 OS9Q13438 667 aaPredicted RBP25.54■■□□□ 1.68
SOX12-201ENST00000342665 TRAK1Q9UPV9 953 aa25.54■■□□□ 1.68
SOX12-201ENST00000342665 CENPJQ9HC77 1338 aaPredicted RBP25.53■■□□□ 1.68
SOX12-201ENST00000342665 ITPRIPQ8IWB1 547 aa25.53■■□□□ 1.68
SOX12-201ENST00000342665 KIF7Q2M1P5 1343 aa25.51■■□□□ 1.67
SOX12-201ENST00000342665 PTMAP06454 111 aaKnown RBP25.51■■□□□ 1.67
SOX12-201ENST00000342665 TOP2BQ02880 1626 aa25.51■■□□□ 1.67
SOX12-201ENST00000342665 SMC4Q9NTJ3 1288 aa25.5■■□□□ 1.67
SOX12-201ENST00000342665 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.67
SOX12-201ENST00000342665 CLUAP1Q96AJ1 413 aa25.47■■□□□ 1.67
SOX12-201ENST00000342665 RRP1P56182 461 aaKnown RBP25.46■■□□□ 1.67
SOX12-201ENST00000342665 ANKRD50Q9ULJ7 1429 aa25.46■■□□□ 1.67
SOX12-201ENST00000342665 NUTM2DQ5VT03 806 aaPredicted RBP25.45■■□□□ 1.67
SOX12-201ENST00000342665 KCNJ4P48050 445 aa25.44■■□□□ 1.66
SOX12-201ENST00000342665 RTN4Q9NQC3 1192 aaKnown RBP25.44■■□□□ 1.66
SOX12-201ENST00000342665 WASHC2AQ641Q2 1341 aa25.43■■□□□ 1.66
SOX12-201ENST00000342665 STAC3Q96MF2 364 aa25.43■■□□□ 1.66
SOX12-201ENST00000342665 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
SOX12-201ENST00000342665 SPRYD3Q8NCJ5 442 aa25.43■■□□□ 1.66
SOX12-201ENST00000342665 VGFO15240 615 aaPredicted RBP25.43■■□□□ 1.66
SOX12-201ENST00000342665 ZRSR1Q15695 479 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms