RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ABCC5O15440 1437 aa29.36■■■□□ 2.29
RTN1-202ENST00000342503 RRP7BPQ9NSQ0 103 aa29.34■■■□□ 2.29
RTN1-202ENST00000342503 UHRF1BP1LA0JNW5 1464 aa29.33■■■□□ 2.29
RTN1-202ENST00000342503 ZCCHC11Q5TAX3 1644 aaKnown RBP29.3■■■□□ 2.28
RTN1-202ENST00000342503 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
RTN1-202ENST00000342503 ROCK1Q13464 1354 aa29.28■■■□□ 2.28
RTN1-202ENST00000342503 KDM6BO15054 1643 aa29.27■■■□□ 2.28
RTN1-202ENST00000342503 CROCC2H7BZ55 1655 aa29.27■■■□□ 2.28
RTN1-202ENST00000342503 ADGBQ8N7X0 1667 aa29.24■■■□□ 2.27
RTN1-202ENST00000342503 KDM5BQ9UGL1 1544 aa29.24■■■□□ 2.27
RTN1-202ENST00000342503 OSCARQ8IYS5 282 aa29.23■■■□□ 2.27
RTN1-202ENST00000342503 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
RTN1-202ENST00000342503 CDC42BPBQ9Y5S2 1711 aa29.23■■■□□ 2.27
RTN1-202ENST00000342503 TTC37Q6PGP7 1564 aa29.2■■■□□ 2.26
RTN1-202ENST00000342503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.19■■■□□ 2.26
RTN1-202ENST00000342503 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
RTN1-202ENST00000342503 SIN3AQ96ST3 1273 aa29.15■■■□□ 2.26
RTN1-202ENST00000342503 MYO5CQ9NQX4 1742 aa29.14■■■□□ 2.26
RTN1-202ENST00000342503 ADGRL2O95490 1459 aa29.13■■■□□ 2.25
RTN1-202ENST00000342503 SAMD9LQ8IVG5 1584 aa29.13■■■□□ 2.25
RTN1-202ENST00000342503 ARHGEF5Q12774 1597 aa29.1■■■□□ 2.25
RTN1-202ENST00000342503 NEUROD1Q13562 356 aa29.1■■■□□ 2.25
RTN1-202ENST00000342503 NCOA1Q15788 1441 aa29.1■■■□□ 2.25
RTN1-202ENST00000342503 SHANK2Q9UPX8 1470 aa29.09■■■□□ 2.25
RTN1-202ENST00000342503 TRIM52Q96A61 297 aa29.08■■■□□ 2.25
RTN1-202ENST00000342503 KCNH8Q96L42 1107 aa29.08■■■□□ 2.25
RTN1-202ENST00000342503 ARHGAP5Q13017 1502 aa29.07■■■□□ 2.24
RTN1-202ENST00000342503 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
RTN1-202ENST00000342503 ANKRD30AQ9BXX3 1397 aa29.05■■■□□ 2.24
RTN1-202ENST00000342503 ACIN1Q9UKV3 1341 aaKnown RBP29.04■■■□□ 2.24
RTN1-202ENST00000342503 DENND4BO75064 1496 aaPredicted RBP29.04■■■□□ 2.24
RTN1-202ENST00000342503 HNRNPMP52272 730 aaKnown RBP eCLIP29.03■■■□□ 2.24
RTN1-202ENST00000342503 C9orf84Q5VXU9 1444 aa29.03■■■□□ 2.24
RTN1-202ENST00000342503 TIMELESSQ9UNS1 1208 aa29.01■■■□□ 2.23
RTN1-202ENST00000342503 CCDC141Q6ZP82 1450 aa28.99■■■□□ 2.23
RTN1-202ENST00000342503 DIEXFQ68CQ4 756 aaKnown RBP28.98■■■□□ 2.23
RTN1-202ENST00000342503 MPHOSPH9Q99550 1183 aa28.98■■■□□ 2.23
RTN1-202ENST00000342503 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
RTN1-202ENST00000342503 TSPY4P0CV99 314 aa28.97■■■□□ 2.23
RTN1-202ENST00000342503 TSPY10P0CW01 314 aa28.97■■■□□ 2.23
RTN1-202ENST00000342503 PLCH2O75038 1416 aa28.97■■■□□ 2.23
RTN1-202ENST00000342503 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
RTN1-202ENST00000342503 RSPH4AQ5TD94 716 aa28.94■■■□□ 2.22
RTN1-202ENST00000342503 PLEKHH2Q8IVE3 1493 aa28.93■■■□□ 2.22
RTN1-202ENST00000342503 ANKRD50Q9ULJ7 1429 aa28.91■■■□□ 2.22
RTN1-202ENST00000342503 KIAA1107Q9UPP5 1409 aa28.91■■■□□ 2.22
RTN1-202ENST00000342503 MAST1Q9Y2H9 1570 aa28.9■■■□□ 2.22
RTN1-202ENST00000342503 TONSLQ96HA7 1378 aa28.88■■■□□ 2.21
RTN1-202ENST00000342503 PZPP20742 1482 aa28.87■■■□□ 2.21
RTN1-202ENST00000342503 EFCAB2Q5VUJ9 269 aa28.86■■■□□ 2.21
RTN1-202ENST00000342503 ASXL2Q76L83 1435 aa28.86■■■□□ 2.21
RTN1-202ENST00000342503 ARAP3Q8WWN8 1544 aa28.86■■■□□ 2.21
RTN1-202ENST00000342503 ARHGEF12Q9NZN5 1544 aa28.86■■■□□ 2.21
RTN1-202ENST00000342503 KIF15Q9NS87 1388 aa28.85■■■□□ 2.21
RTN1-202ENST00000342503 ABCA9Q8IUA7 1624 aa28.85■■■□□ 2.21
RTN1-202ENST00000342503 PPP1R15AO75807 674 aaPredicted RBP28.85■■■□□ 2.21
RTN1-202ENST00000342503 ABCC1P33527 1531 aa28.83■■■□□ 2.21
RTN1-202ENST00000342503 FOXD1Q16676 465 aa28.83■■■□□ 2.21
RTN1-202ENST00000342503 SLC4A1APQ9BWU0 796 aaKnown RBP28.83■■■□□ 2.21
RTN1-202ENST00000342503 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
RTN1-202ENST00000342503 ANKRD30BQ9BXX2 1392 aa28.79■■■□□ 2.2
RTN1-202ENST00000342503 PLXNC1O60486 1568 aa28.78■■■□□ 2.2
RTN1-202ENST00000342503 KDM5DQ9BY66 1539 aa28.75■■■□□ 2.19
RTN1-202ENST00000342503 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
RTN1-202ENST00000342503 NUP155O75694 1391 aa28.7■■■□□ 2.19
RTN1-202ENST00000342503 FANCAO15360 1455 aa28.69■■■□□ 2.18
RTN1-202ENST00000342503 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
RTN1-202ENST00000342503 PKD2Q13563 968 aa28.66■■■□□ 2.18
RTN1-202ENST00000342503 DUOX2Q9NRD8 1548 aa28.65■■■□□ 2.18
RTN1-202ENST00000342503 UNC13BO14795 1591 aa28.64■■■□□ 2.18
RTN1-202ENST00000342503 RIMBP3CA6NJZ7 1639 aa28.62■■■□□ 2.17
RTN1-202ENST00000342503 RIMBP3BA6NNM3 1639 aa28.62■■■□□ 2.17
RTN1-202ENST00000342503 RIMBP3Q9UFD9 1639 aa28.62■■■□□ 2.17
RTN1-202ENST00000342503 ADGRL1O94910 1474 aa28.59■■■□□ 2.17
RTN1-202ENST00000342503 RTEL1-TNFRSF6BF6WH68 1400 aa28.59■■■□□ 2.17
RTN1-202ENST00000342503 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
RTN1-202ENST00000342503 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
RTN1-202ENST00000342503 SPAG9O60271 1321 aaKnown RBP28.58■■■□□ 2.17
RTN1-202ENST00000342503 AFAP1Q8N556 730 aa28.58■■■□□ 2.17
RTN1-202ENST00000342503 L3MBTL2Q969R5 705 aa28.58■■■□□ 2.17
RTN1-202ENST00000342503 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
RTN1-202ENST00000342503 TEX14Q8IWB6 1497 aa28.57■■■□□ 2.16
RTN1-202ENST00000342503 SCAPERQ9BY12 1400 aa28.55■■■□□ 2.16
RTN1-202ENST00000342503 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
RTN1-202ENST00000342503 CD109Q6YHK3 1445 aa28.53■■■□□ 2.16
RTN1-202ENST00000342503 CFAP74Q9C0B2 1584 aa28.53■■■□□ 2.16
RTN1-202ENST00000342503 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
RTN1-202ENST00000342503 CYB5RLQ6IPT4 315 aa28.52■■■□□ 2.16
RTN1-202ENST00000342503 ATP7AQ04656 1500 aa28.51■■■□□ 2.15
RTN1-202ENST00000342503 MAGI2Q86UL8 1455 aa28.5■■■□□ 2.15
RTN1-202ENST00000342503 MIER1Q8N108 512 aa28.5■■■□□ 2.15
RTN1-202ENST00000342503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.47■■■□□ 2.15
RTN1-202ENST00000342503 HIRIP3Q9BW71 556 aaPredicted RBP28.44■■■□□ 2.14
RTN1-202ENST00000342503 KIDINS220Q9ULH0 1771 aa28.4■■■□□ 2.14
RTN1-202ENST00000342503 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
RTN1-202ENST00000342503 NBPF8Q3BBV2 869 aa28.39■■■□□ 2.14
RTN1-202ENST00000342503 MYT1LQ9UL68 1186 aa28.38■■■□□ 2.13
RTN1-202ENST00000342503 DEPDC5O75140 1603 aa28.38■■■□□ 2.13
RTN1-202ENST00000342503 MAP3K4Q9Y6R4 1608 aa28.37■■■□□ 2.13
RTN1-202ENST00000342503 POGZQ7Z3K3 1410 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms