RNA–Protein interactions for RNA: ENST00000342016.7

CIR1-201, Transcript of corepressor interacting with RBPJ, 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIR1, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-201ENST00000342016 SPATA31D1Q6ZQQ2 1576 aa12.67□□□□□ -0.38
CIR1-201ENST00000342016 FHOD3Q2V2M9 1422 aa12.66□□□□□ -0.38
CIR1-201ENST00000342016 CFAP74Q9C0B2 1584 aa12.65□□□□□ -0.38
CIR1-201ENST00000342016 ZMYM4Q5VZL5 1548 aa12.65□□□□□ -0.38
CIR1-201ENST00000342016 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
CIR1-201ENST00000342016 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
CIR1-201ENST00000342016 MAGI2Q86UL8 1455 aa12.64□□□□□ -0.39
CIR1-201ENST00000342016 RICTORQ6R327 1708 aa12.62□□□□□ -0.39
CIR1-201ENST00000342016 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
CIR1-201ENST00000342016 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
CIR1-201ENST00000342016 PREX1Q8TCU6 1659 aa12.6□□□□□ -0.39
CIR1-201ENST00000342016 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
CIR1-201ENST00000342016 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
CIR1-201ENST00000342016 PRXQ9BXM0 1461 aa12.58□□□□□ -0.39
CIR1-201ENST00000342016 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.39
CIR1-201ENST00000342016 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
CIR1-201ENST00000342016 CAPN15O75808 1086 aa12.58□□□□□ -0.4
CIR1-201ENST00000342016 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
CIR1-201ENST00000342016 PTPRTO14522 1441 aa12.56□□□□□ -0.4
CIR1-201ENST00000342016 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
CIR1-201ENST00000342016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
CIR1-201ENST00000342016 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
CIR1-201ENST00000342016 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
CIR1-201ENST00000342016 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
CIR1-201ENST00000342016 C9orf84Q5VXU9 1444 aa12.52□□□□□ -0.4
CIR1-201ENST00000342016 ATP10AO60312 1499 aa12.52□□□□□ -0.41
CIR1-201ENST00000342016 HECW1Q76N89 1606 aa12.52□□□□□ -0.41
CIR1-201ENST00000342016 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
CIR1-201ENST00000342016 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.41
CIR1-201ENST00000342016 STRCQ7RTU9 1775 aa12.52□□□□□ -0.41
CIR1-201ENST00000342016 MLECQ14165 292 aa12.5□□□□□ -0.41
CIR1-201ENST00000342016 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
CIR1-201ENST00000342016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.41
CIR1-201ENST00000342016 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
CIR1-201ENST00000342016 LTBP4Q8N2S1 1624 aa12.48□□□□□ -0.41
CIR1-201ENST00000342016 SCAPERQ9BY12 1400 aa12.47□□□□□ -0.41
CIR1-201ENST00000342016 PLCH2O75038 1416 aa12.45□□□□□ -0.42
CIR1-201ENST00000342016 SETD1BQ9UPS6 1966 aaKnown RBP12.44□□□□□ -0.42
CIR1-201ENST00000342016 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
CIR1-201ENST00000342016 CEBPAP49715 358 aaPredicted RBP12.43□□□□□ -0.42
CIR1-201ENST00000342016 NCOA1Q15788 1441 aa12.42□□□□□ -0.42
CIR1-201ENST00000342016 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
CIR1-201ENST00000342016 ZNF518AQ6AHZ1 1483 aa12.41□□□□□ -0.42
CIR1-201ENST00000342016 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
CIR1-201ENST00000342016 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
CIR1-201ENST00000342016 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
CIR1-201ENST00000342016 KDM5CP41229 1560 aa12.39□□□□□ -0.43
CIR1-201ENST00000342016 AGLP35573 1532 aa12.39□□□□□ -0.43
CIR1-201ENST00000342016 C3P01024 1663 aa12.38□□□□□ -0.43
CIR1-201ENST00000342016 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
CIR1-201ENST00000342016 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
CIR1-201ENST00000342016 MYO5CQ9NQX4 1742 aa12.36□□□□□ -0.43
CIR1-201ENST00000342016 UBAP1LF5GYI3 381 aa12.36□□□□□ -0.43
CIR1-201ENST00000342016 NPATQ14207 1427 aa12.36□□□□□ -0.43
CIR1-201ENST00000342016 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
CIR1-201ENST00000342016 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
CIR1-201ENST00000342016 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
CIR1-201ENST00000342016 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
CIR1-201ENST00000342016 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
CIR1-201ENST00000342016 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
CIR1-201ENST00000342016 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
CIR1-201ENST00000342016 PKD2Q13563 968 aa12.31□□□□□ -0.44
CIR1-201ENST00000342016 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
CIR1-201ENST00000342016 MROH2AA6NES4 1674 aa12.31□□□□□ -0.44
CIR1-201ENST00000342016 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
CIR1-201ENST00000342016 ARHGAP5Q13017 1502 aa12.3□□□□□ -0.44
CIR1-201ENST00000342016 KIF14Q15058 1648 aa12.3□□□□□ -0.44
CIR1-201ENST00000342016 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
CIR1-201ENST00000342016 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
CIR1-201ENST00000342016 EEA1Q15075 1411 aa12.3□□□□□ -0.44
CIR1-201ENST00000342016 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
CIR1-201ENST00000342016 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
CIR1-201ENST00000342016 CLIP1P30622 1438 aa12.28□□□□□ -0.44
CIR1-201ENST00000342016 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.44
CIR1-201ENST00000342016 TROQ12816 1431 aaPredicted RBP12.27□□□□□ -0.45
CIR1-201ENST00000342016 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
CIR1-201ENST00000342016 TCOF1Q13428 1488 aaKnown RBP12.26□□□□□ -0.45
CIR1-201ENST00000342016 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
CIR1-201ENST00000342016 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
CIR1-201ENST00000342016 CPS1P31327 1500 aa12.24□□□□□ -0.45
CIR1-201ENST00000342016 ABCC1P33527 1531 aa12.24□□□□□ -0.45
CIR1-201ENST00000342016 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
CIR1-201ENST00000342016 TOM1O60784 492 aa12.23□□□□□ -0.45
CIR1-201ENST00000342016 HSPA1LP34931 641 aa12.23□□□□□ -0.45
CIR1-201ENST00000342016 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
CIR1-201ENST00000342016 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
CIR1-201ENST00000342016 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
CIR1-201ENST00000342016 CEP170BQ9Y4F5 1589 aaPredicted RBP12.22□□□□□ -0.45
CIR1-201ENST00000342016 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
CIR1-201ENST00000342016 PREX2Q70Z35 1606 aa12.21□□□□□ -0.46
CIR1-201ENST00000342016 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
CIR1-201ENST00000342016 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
CIR1-201ENST00000342016 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
CIR1-201ENST00000342016 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
CIR1-201ENST00000342016 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
CIR1-201ENST00000342016 PIP4K2BP78356 416 aa12.17□□□□□ -0.46
CIR1-201ENST00000342016 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
CIR1-201ENST00000342016 ABCB7O75027 752 aa12.16□□□□□ -0.46
CIR1-201ENST00000342016 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
CIR1-201ENST00000342016 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms