RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CDC42BPAQ5VT25 1732 aa14.86□□□□□ -0.03
CAPRIN1-201ENST00000341394 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
CAPRIN1-201ENST00000341394 KDM6BO15054 1643 aa14.85□□□□□ -0.03
CAPRIN1-201ENST00000341394 TCOF1Q13428 1488 aaKnown RBP14.85□□□□□ -0.03
CAPRIN1-201ENST00000341394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
CAPRIN1-201ENST00000341394 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
CAPRIN1-201ENST00000341394 SETD5Q9C0A6 1442 aa14.85□□□□□ -0.03
CAPRIN1-201ENST00000341394 GPATCH8Q9UKJ3 1502 aaKnown RBP14.84□□□□□ -0.03
CAPRIN1-201ENST00000341394 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
CAPRIN1-201ENST00000341394 FKBP8Q14318 412 aa14.83□□□□□ -0.03
CAPRIN1-201ENST00000341394 MAPKBP1O60336 1514 aa14.83□□□□□ -0.04
CAPRIN1-201ENST00000341394 ABCC2Q92887 1545 aa14.83□□□□□ -0.04
CAPRIN1-201ENST00000341394 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
CAPRIN1-201ENST00000341394 TRIM52Q96A61 297 aa14.82□□□□□ -0.04
CAPRIN1-201ENST00000341394 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
CAPRIN1-201ENST00000341394 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
CAPRIN1-201ENST00000341394 ZCCHC11Q5TAX3 1644 aaKnown RBP14.81□□□□□ -0.04
CAPRIN1-201ENST00000341394 NAIPQ13075 1403 aa14.8□□□□□ -0.04
CAPRIN1-201ENST00000341394 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
CAPRIN1-201ENST00000341394 TTC37Q6PGP7 1564 aa14.79□□□□□ -0.04
CAPRIN1-201ENST00000341394 CDC42BPBQ9Y5S2 1711 aa14.78□□□□□ -0.04
CAPRIN1-201ENST00000341394 CAMSAP2Q08AD1 1489 aa14.78□□□□□ -0.04
CAPRIN1-201ENST00000341394 HFM1A2PYH4 1435 aa14.77□□□□□ -0.04
CAPRIN1-201ENST00000341394 ABCC5O15440 1437 aa14.77□□□□□ -0.04
CAPRIN1-201ENST00000341394 ITSN2Q9NZM3 1697 aa14.77□□□□□ -0.05
CAPRIN1-201ENST00000341394 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
CAPRIN1-201ENST00000341394 DNMT1P26358 1616 aaKnown RBP14.76□□□□□ -0.05
CAPRIN1-201ENST00000341394 DAPK1P53355 1430 aa14.76□□□□□ -0.05
CAPRIN1-201ENST00000341394 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
CAPRIN1-201ENST00000341394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.75□□□□□ -0.052e-25■□□□□ 8.2
CAPRIN1-201ENST00000341394 GCC2Q8IWJ2 1684 aa14.73□□□□□ -0.05
CAPRIN1-201ENST00000341394 SIN3AQ96ST3 1273 aa14.73□□□□□ -0.05
CAPRIN1-201ENST00000341394 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
CAPRIN1-201ENST00000341394 KDM5BQ9UGL1 1544 aa14.72□□□□□ -0.05
CAPRIN1-201ENST00000341394 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
CAPRIN1-201ENST00000341394 SAMD9LQ8IVG5 1584 aa14.71□□□□□ -0.05
CAPRIN1-201ENST00000341394 PREX2Q70Z35 1606 aa14.7□□□□□ -0.06
CAPRIN1-201ENST00000341394 CROCC2H7BZ55 1655 aa14.7□□□□□ -0.06
CAPRIN1-201ENST00000341394 UHRF1BP1LA0JNW5 1464 aa14.69□□□□□ -0.06
CAPRIN1-201ENST00000341394 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
CAPRIN1-201ENST00000341394 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
CAPRIN1-201ENST00000341394 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.06
CAPRIN1-201ENST00000341394 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
CAPRIN1-201ENST00000341394 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
CAPRIN1-201ENST00000341394 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
CAPRIN1-201ENST00000341394 FOXD1Q16676 465 aa14.65□□□□□ -0.06
CAPRIN1-201ENST00000341394 MBD5Q9P267 1494 aa14.65□□□□□ -0.06
CAPRIN1-201ENST00000341394 SYCP2Q9BX26 1530 aa14.64□□□□□ -0.07
CAPRIN1-201ENST00000341394 ARHGEF12Q9NZN5 1544 aa14.64□□□□□ -0.07
CAPRIN1-201ENST00000341394 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
CAPRIN1-201ENST00000341394 ARHGAP5Q13017 1502 aa14.63□□□□□ -0.07
CAPRIN1-201ENST00000341394 ADGBQ8N7X0 1667 aa14.63□□□□□ -0.07
CAPRIN1-201ENST00000341394 CLSPNQ9HAW4 1339 aa14.62□□□□□ -0.07
CAPRIN1-201ENST00000341394 NBR1Q14596 966 aa14.61□□□□□ -0.07
CAPRIN1-201ENST00000341394 EFCAB2Q5VUJ9 269 aa14.6□□□□□ -0.07
CAPRIN1-201ENST00000341394 ANP32CO43423 234 aa14.6□□□□□ -0.07
CAPRIN1-201ENST00000341394 NPM2Q86SE8 214 aaKnown RBP14.6□□□□□ -0.07
CAPRIN1-201ENST00000341394 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
CAPRIN1-201ENST00000341394 WDR7Q9Y4E6 1490 aa14.59□□□□□ -0.07
CAPRIN1-201ENST00000341394 C9orf84Q5VXU9 1444 aa14.59□□□□□ -0.07
CAPRIN1-201ENST00000341394 ASXL2Q76L83 1435 aa14.59□□□□□ -0.07
CAPRIN1-201ENST00000341394 SALL2Q9Y467 1007 aaPredicted RBP14.58□□□□□ -0.08
CAPRIN1-201ENST00000341394 ADGRL2O95490 1459 aa14.57□□□□□ -0.08
CAPRIN1-201ENST00000341394 RIMBP3CA6NJZ7 1639 aa14.56□□□□□ -0.08
CAPRIN1-201ENST00000341394 RIMBP3BA6NNM3 1639 aa14.56□□□□□ -0.08
CAPRIN1-201ENST00000341394 RIMBP3Q9UFD9 1639 aa14.56□□□□□ -0.08
CAPRIN1-201ENST00000341394 PLCH2O75038 1416 aa14.56□□□□□ -0.08
CAPRIN1-201ENST00000341394 ARHGEF5Q12774 1597 aa14.56□□□□□ -0.08
CAPRIN1-201ENST00000341394 HNRNPUQ00839 825 aaKnown RBP eCLIP14.54□□□□□ -0.08
CAPRIN1-201ENST00000341394 MPHOSPH9Q99550 1183 aa14.54□□□□□ -0.08
CAPRIN1-201ENST00000341394 CCDC141Q6ZP82 1450 aa14.54□□□□□ -0.08
CAPRIN1-201ENST00000341394 RTL5Q5HYW3 569 aaPredicted RBP14.54□□□□□ -0.08
CAPRIN1-201ENST00000341394 TRAPPC8Q9Y2L5 1435 aa14.54□□□□□ -0.08
CAPRIN1-201ENST00000341394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.083e-12■■■□□ 15.2
CAPRIN1-201ENST00000341394 PZPP20742 1482 aa14.53□□□□□ -0.08
CAPRIN1-201ENST00000341394 ABCA9Q8IUA7 1624 aa14.53□□□□□ -0.08
CAPRIN1-201ENST00000341394 SHANK2Q9UPX8 1470 aa14.52□□□□□ -0.08
CAPRIN1-201ENST00000341394 FAM9BQ8IZU0 186 aa14.52□□□□□ -0.08
CAPRIN1-201ENST00000341394 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.08
CAPRIN1-201ENST00000341394 ABCC1P33527 1531 aa14.52□□□□□ -0.09
CAPRIN1-201ENST00000341394 ANKRD50Q9ULJ7 1429 aa14.52□□□□□ -0.09
CAPRIN1-201ENST00000341394 BCL11AQ9H165 835 aa14.51□□□□□ -0.09
CAPRIN1-201ENST00000341394 ANKRD30AQ9BXX3 1397 aa14.51□□□□□ -0.09
CAPRIN1-201ENST00000341394 KIF15Q9NS87 1388 aa14.51□□□□□ -0.09
CAPRIN1-201ENST00000341394 AFAP1Q8N556 730 aa14.51□□□□□ -0.09
CAPRIN1-201ENST00000341394 DAXXQ9UER7 740 aaPredicted RBP14.51□□□□□ -0.09
CAPRIN1-201ENST00000341394 RSPH4AQ5TD94 716 aa14.5□□□□□ -0.09
CAPRIN1-201ENST00000341394 FANCAO15360 1455 aa14.47□□□□□ -0.09
CAPRIN1-201ENST00000341394 SUPT16HQ9Y5B9 1047 aaKnown RBP14.47□□□□□ -0.09
CAPRIN1-201ENST00000341394 KIAA1107Q9UPP5 1409 aa14.46□□□□□ -0.1
CAPRIN1-201ENST00000341394 MAST1Q9Y2H9 1570 aa14.44□□□□□ -0.1
CAPRIN1-201ENST00000341394 SPAG9O60271 1321 aaKnown RBP14.44□□□□□ -0.1
CAPRIN1-201ENST00000341394 ANKRD30BQ9BXX2 1392 aa14.44□□□□□ -0.1
CAPRIN1-201ENST00000341394 PLEKHH2Q8IVE3 1493 aa14.44□□□□□ -0.1
CAPRIN1-201ENST00000341394 FAM69CQ0P6D2 419 aa14.43□□□□□ -0.1
CAPRIN1-201ENST00000341394 TONSLQ96HA7 1378 aa14.43□□□□□ -0.1
CAPRIN1-201ENST00000341394 NUP155O75694 1391 aa14.42□□□□□ -0.1
CAPRIN1-201ENST00000341394 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
CAPRIN1-201ENST00000341394 PLXNC1O60486 1568 aa14.42□□□□□ -0.1
CAPRIN1-201ENST00000341394 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms