RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 KANK4Q5T7N3 995 aaPredicted RBP9.91□□□□□ -0.82
ATP2B4-201ENST00000341360 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
ATP2B4-201ENST00000341360 ROCK2O75116 1388 aaKnown RBP9.9□□□□□ -0.82
ATP2B4-201ENST00000341360 IPO8O15397 1037 aaKnown RBP9.9□□□□□ -0.82
ATP2B4-201ENST00000341360 CYB5RLQ6IPT4 315 aa9.9□□□□□ -0.82
ATP2B4-201ENST00000341360 GGT6Q6P531 493 aa9.9□□□□□ -0.83
ATP2B4-201ENST00000341360 RTF1Q92541 710 aaKnown RBP9.9□□□□□ -0.83
ATP2B4-201ENST00000341360 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.83
ATP2B4-201ENST00000341360 RRBP1Q9P2E9 1410 aaKnown RBP9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 KTN1Q86UP2 1357 aaKnown RBP9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 PKD2Q13563 968 aa9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 RALBP1Q15311 655 aa9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 MLECQ14165 292 aa9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 TERF2IPQ9NYB0 399 aa9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 NUP155O75694 1391 aa9.89□□□□□ -0.83
ATP2B4-201ENST00000341360 U2SURPO15042 1029 aaKnown RBP9.88□□□□□ -0.83
ATP2B4-201ENST00000341360 ARXQ96QS3 562 aa9.88□□□□□ -0.83
ATP2B4-201ENST00000341360 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
ATP2B4-201ENST00000341360 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
ATP2B4-201ENST00000341360 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
ATP2B4-201ENST00000341360 OS9Q13438 667 aaPredicted RBP9.87□□□□□ -0.83
ATP2B4-201ENST00000341360 NRDCO43847 1150 aa9.86□□□□□ -0.83
ATP2B4-201ENST00000341360 MCCP23508 829 aa9.86□□□□□ -0.83
ATP2B4-201ENST00000341360 SIN3AQ96ST3 1273 aa9.86□□□□□ -0.83
ATP2B4-201ENST00000341360 LMOD3Q0VAK6 560 aa9.86□□□□□ -0.83
ATP2B4-201ENST00000341360 PHLDB1Q86UU1 1377 aa9.85□□□□□ -0.83
ATP2B4-201ENST00000341360 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
ATP2B4-201ENST00000341360 PLEKHG5O94827 1062 aa9.85□□□□□ -0.83
ATP2B4-201ENST00000341360 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
ATP2B4-201ENST00000341360 GOLGA6L6A8MZA4 724 aa9.84□□□□□ -0.83
ATP2B4-201ENST00000341360 PTPRGP23470 1445 aa9.84□□□□□ -0.83
ATP2B4-201ENST00000341360 FANCIQ9NVI1 1328 aa9.84□□□□□ -0.83
ATP2B4-201ENST00000341360 KIF3BO15066 747 aa9.83□□□□□ -0.84
ATP2B4-201ENST00000341360 TRIM44Q96DX7 344 aaPredicted RBP9.83□□□□□ -0.84
ATP2B4-201ENST00000341360 MPHOSPH9Q99550 1183 aa9.83□□□□□ -0.84
ATP2B4-201ENST00000341360 FGD1P98174 961 aa9.83□□□□□ -0.84
ATP2B4-201ENST00000341360 HIRIP3Q9BW71 556 aaPredicted RBP9.83□□□□□ -0.84
ATP2B4-201ENST00000341360 SYNJ1O43426 1573 aa9.83□□□□□ -0.84
ATP2B4-201ENST00000341360 WASHC2CQ9Y4E1 1318 aa9.82□□□□□ -0.84
ATP2B4-201ENST00000341360 SENP3Q9H4L4 574 aaPredicted RBP9.82□□□□□ -0.84
ATP2B4-201ENST00000341360 KCNJ4P48050 445 aa9.82□□□□□ -0.84
ATP2B4-201ENST00000341360 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
ATP2B4-201ENST00000341360 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
ATP2B4-201ENST00000341360 CC2D1BQ5T0F9 858 aaKnown RBP9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 NGEFQ8N5V2 710 aa9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 PTMSP20962 102 aa9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 NOP58Q9Y2X3 529 aaKnown RBP9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 TOP2BQ02880 1626 aa9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 PRXQ9BXM0 1461 aa9.8□□□□□ -0.84
ATP2B4-201ENST00000341360 PDE3BQ13370 1112 aa9.79□□□□□ -0.84
ATP2B4-201ENST00000341360 FRAT1Q92837 279 aaPredicted RBP9.79□□□□□ -0.84
ATP2B4-201ENST00000341360 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
ATP2B4-201ENST00000341360 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
ATP2B4-201ENST00000341360 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
ATP2B4-201ENST00000341360 IRX6P78412 446 aaPredicted RBP9.78□□□□□ -0.84
ATP2B4-201ENST00000341360 ARAP1Q96P48 1450 aa9.78□□□□□ -0.84
ATP2B4-201ENST00000341360 L1TD1Q5T7N2 865 aaKnown RBP9.77□□□□□ -0.84
ATP2B4-201ENST00000341360 HMMRO75330 724 aa9.77□□□□□ -0.85
ATP2B4-201ENST00000341360 HSPA5P11021 654 aaKnown RBP9.77□□□□□ -0.85
ATP2B4-201ENST00000341360 CCDC144AA2RUR9 1427 aa9.77□□□□□ -0.85
ATP2B4-201ENST00000341360 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
ATP2B4-201ENST00000341360 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATP2B4-201ENST00000341360 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
ATP2B4-201ENST00000341360 CHMP4CQ96CF2 233 aa9.76□□□□□ -0.85
ATP2B4-201ENST00000341360 FHOD3Q2V2M9 1422 aa9.76□□□□□ -0.85
ATP2B4-201ENST00000341360 PEG3Q9GZU2 1588 aa9.76□□□□□ -0.85
ATP2B4-201ENST00000341360 NLRP13Q86W25 1043 aa9.76□□□□□ -0.85
ATP2B4-201ENST00000341360 GPATCH3Q96I76 525 aa9.76□□□□□ -0.85
ATP2B4-201ENST00000341360 MAP3K1Q13233 1512 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 GAPVD1Q14C86 1478 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 PTMAP06454 111 aaKnown RBP9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 GOLGA6L4A6NEF3 574 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 KIAA1211Q6ZU35 1233 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 HSCBQ8IWL3 235 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 STK26Q9P289 416 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 HSP90AB1P08238 724 aaKnown RBP9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 U2AF1L5P0DN76 240 aaPredicted RBP9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 U2AF1Q01081 240 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 NBR1Q14596 966 aa9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
ATP2B4-201ENST00000341360 MYOM3Q5VTT5 1437 aa9.74□□□□□ -0.85
ATP2B4-201ENST00000341360 LRRC9Q6ZRR7 1453 aa9.73□□□□□ -0.85
ATP2B4-201ENST00000341360 PAK3O75914 559 aaPredicted RBP9.73□□□□□ -0.85
ATP2B4-201ENST00000341360 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
ATP2B4-201ENST00000341360 CUX1P39880 1505 aa9.73□□□□□ -0.85
ATP2B4-201ENST00000341360 DEKP35659 375 aaKnown RBP9.73□□□□□ -0.85
ATP2B4-201ENST00000341360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATP2B4-201ENST00000341360 HNRNPMP52272 730 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATP2B4-201ENST00000341360 EVC2Q86UK5 1308 aa9.72□□□□□ -0.85
ATP2B4-201ENST00000341360 SAFB2Q14151 953 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATP2B4-201ENST00000341360 KIF15Q9NS87 1388 aa9.71□□□□□ -0.86
ATP2B4-201ENST00000341360 AMPHP49418 695 aa9.7□□□□□ -0.86
ATP2B4-201ENST00000341360 RGS3P49796 1198 aa9.7□□□□□ -0.86
ATP2B4-201ENST00000341360 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
ATP2B4-201ENST00000341360 KIF3AQ9Y496 699 aa9.69□□□□□ -0.86
ATP2B4-201ENST00000341360 TIAM1Q13009 1591 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms