RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
CCDC144CP-201ENST00000340196 NAIPQ13075 1403 aa16.67■□□□□ 0.26
CCDC144CP-201ENST00000340196 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
CCDC144CP-201ENST00000340196 UACAQ9BZF9 1416 aa16.66■□□□□ 0.26
CCDC144CP-201ENST00000340196 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
CCDC144CP-201ENST00000340196 HFM1A2PYH4 1435 aa16.65■□□□□ 0.26
CCDC144CP-201ENST00000340196 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.26
CCDC144CP-201ENST00000340196 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
CCDC144CP-201ENST00000340196 NCOA2Q15596 1464 aa16.63■□□□□ 0.25
CCDC144CP-201ENST00000340196 FAM9BQ8IZU0 186 aa16.63■□□□□ 0.25
CCDC144CP-201ENST00000340196 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
CCDC144CP-201ENST00000340196 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
CCDC144CP-201ENST00000340196 ERICH6Q7L0X2 663 aa16.61■□□□□ 0.25
CCDC144CP-201ENST00000340196 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
CCDC144CP-201ENST00000340196 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
CCDC144CP-201ENST00000340196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC144CP-201ENST00000340196 DENND4BO75064 1496 aaPredicted RBP16.58■□□□□ 0.25
CCDC144CP-201ENST00000340196 SHROOM2Q13796 1616 aa16.58■□□□□ 0.25
CCDC144CP-201ENST00000340196 MYOM3Q5VTT5 1437 aa16.58■□□□□ 0.24
CCDC144CP-201ENST00000340196 KDM6BO15054 1643 aa16.57■□□□□ 0.24
CCDC144CP-201ENST00000340196 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
CCDC144CP-201ENST00000340196 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
CCDC144CP-201ENST00000340196 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
CCDC144CP-201ENST00000340196 L3MBTL2Q969R5 705 aa16.56■□□□□ 0.24
CCDC144CP-201ENST00000340196 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
CCDC144CP-201ENST00000340196 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
CCDC144CP-201ENST00000340196 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
CCDC144CP-201ENST00000340196 CDK11AQ9UQ88 783 aaPredicted RBP16.53■□□□□ 0.24
CCDC144CP-201ENST00000340196 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
CCDC144CP-201ENST00000340196 EIF4G2P78344 907 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC144CP-201ENST00000340196 PRG4Q92954 1404 aaPredicted RBP16.52■□□□□ 0.24
CCDC144CP-201ENST00000340196 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
CCDC144CP-201ENST00000340196 ABCA8O94911 1581 aa16.51■□□□□ 0.23
CCDC144CP-201ENST00000340196 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
CCDC144CP-201ENST00000340196 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
CCDC144CP-201ENST00000340196 PLB1Q6P1J6 1458 aa16.51■□□□□ 0.23
CCDC144CP-201ENST00000340196 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
CCDC144CP-201ENST00000340196 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
CCDC144CP-201ENST00000340196 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
CCDC144CP-201ENST00000340196 ZNF644Q9H582 1327 aaPredicted RBP16.46■□□□□ 0.23
CCDC144CP-201ENST00000340196 CNTLNQ9NXG0 1405 aa16.46■□□□□ 0.23
CCDC144CP-201ENST00000340196 PTPRGP23470 1445 aa16.44■□□□□ 0.22
CCDC144CP-201ENST00000340196 ZNF326Q5BKZ1 582 aaKnown RBP16.44■□□□□ 0.22
CCDC144CP-201ENST00000340196 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
CCDC144CP-201ENST00000340196 PPP4R2Q9NY27 417 aa16.41■□□□□ 0.22
CCDC144CP-201ENST00000340196 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
CCDC144CP-201ENST00000340196 TCOF1Q13428 1488 aaKnown RBP16.41■□□□□ 0.22
CCDC144CP-201ENST00000340196 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
CCDC144CP-201ENST00000340196 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
CCDC144CP-201ENST00000340196 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
CCDC144CP-201ENST00000340196 ADCY10Q96PN6 1610 aa16.4■□□□□ 0.22
CCDC144CP-201ENST00000340196 ATP10BO94823 1461 aa16.4■□□□□ 0.22
CCDC144CP-201ENST00000340196 ERCC6L2Q5T890 1561 aa16.39■□□□□ 0.21
CCDC144CP-201ENST00000340196 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
CCDC144CP-201ENST00000340196 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
CCDC144CP-201ENST00000340196 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
CCDC144CP-201ENST00000340196 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
CCDC144CP-201ENST00000340196 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
CCDC144CP-201ENST00000340196 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
CCDC144CP-201ENST00000340196 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
CCDC144CP-201ENST00000340196 ANKRD30BQ9BXX2 1392 aa16.33■□□□□ 0.2
CCDC144CP-201ENST00000340196 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
CCDC144CP-201ENST00000340196 NBR1Q14596 966 aa16.33■□□□□ 0.2
CCDC144CP-201ENST00000340196 ABCC2Q92887 1545 aa16.32■□□□□ 0.2
CCDC144CP-201ENST00000340196 KIF14Q15058 1648 aa16.31■□□□□ 0.2
CCDC144CP-201ENST00000340196 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
CCDC144CP-201ENST00000340196 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
CCDC144CP-201ENST00000340196 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
CCDC144CP-201ENST00000340196 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
CCDC144CP-201ENST00000340196 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
CCDC144CP-201ENST00000340196 RPRD2Q5VT52 1461 aaKnown RBP16.28■□□□□ 0.2
CCDC144CP-201ENST00000340196 GPATCH8Q9UKJ3 1502 aaKnown RBP16.28■□□□□ 0.2
CCDC144CP-201ENST00000340196 ABCC10Q5T3U5 1492 aa16.28■□□□□ 0.2
CCDC144CP-201ENST00000340196 DAPK1P53355 1430 aa16.27■□□□□ 0.2
CCDC144CP-201ENST00000340196 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.2
CCDC144CP-201ENST00000340196 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
CCDC144CP-201ENST00000340196 ABCC5O15440 1437 aa16.27■□□□□ 0.2
CCDC144CP-201ENST00000340196 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
CCDC144CP-201ENST00000340196 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
CCDC144CP-201ENST00000340196 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
CCDC144CP-201ENST00000340196 DNMT1P26358 1616 aaKnown RBP16.24■□□□□ 0.19
CCDC144CP-201ENST00000340196 DEKP35659 375 aaKnown RBP16.22■□□□□ 0.19
CCDC144CP-201ENST00000340196 CCDC136Q96JN2 1154 aa16.22■□□□□ 0.19
CCDC144CP-201ENST00000340196 ERICH6BQ5W0A0 696 aa16.22■□□□□ 0.19
CCDC144CP-201ENST00000340196 USP47Q96K76 1375 aa16.21■□□□□ 0.19
CCDC144CP-201ENST00000340196 CFDP1Q9UEE9 299 aaPredicted RBP16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 ZCCHC11Q5TAX3 1644 aaKnown RBP16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 CAMSAP2Q08AD1 1489 aa16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 PKD2Q13563 968 aa16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
CCDC144CP-201ENST00000340196 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
CCDC144CP-201ENST00000340196 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
CCDC144CP-201ENST00000340196 PZPP20742 1482 aa16.18■□□□□ 0.18
CCDC144CP-201ENST00000340196 SMG6Q86US8 1419 aaKnown RBP16.16■□□□□ 0.18
CCDC144CP-201ENST00000340196 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
CCDC144CP-201ENST00000340196 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
CCDC144CP-201ENST00000340196 CDC42BPBQ9Y5S2 1711 aa16.15■□□□□ 0.18
CCDC144CP-201ENST00000340196 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms