RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 STK26Q9P289 416 aa24.22■■□□□ 1.47
FGFR3-202ENST00000340107 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
FGFR3-202ENST00000340107 PTPRGP23470 1445 aa24.2■■□□□ 1.47
FGFR3-202ENST00000340107 U2SURPO15042 1029 aaKnown RBP24.2■■□□□ 1.46
FGFR3-202ENST00000340107 PRXQ9BXM0 1461 aa24.2■■□□□ 1.46
FGFR3-202ENST00000340107 FRAT1Q92837 279 aaPredicted RBP24.19■■□□□ 1.46
FGFR3-202ENST00000340107 SPAG9O60271 1321 aaKnown RBP24.19■■□□□ 1.46
FGFR3-202ENST00000340107 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
FGFR3-202ENST00000340107 FGD6Q6ZV73 1430 aa24.17■■□□□ 1.46
FGFR3-202ENST00000340107 LAS1LQ9Y4W2 734 aaKnown RBP24.17■■□□□ 1.46
FGFR3-202ENST00000340107 CUX1P39880 1505 aa24.17■■□□□ 1.46
FGFR3-202ENST00000340107 ST20-MTHFSA0A0A6YYL1 179 aa24.17■■□□□ 1.46
FGFR3-202ENST00000340107 SRPK2P78362 688 aaKnown RBP24.17■■□□□ 1.46
FGFR3-202ENST00000340107 BICRAQ9NZM4 1560 aa24.15■■□□□ 1.46
FGFR3-202ENST00000340107 RSPH4AQ5TD94 716 aa24.15■■□□□ 1.46
FGFR3-202ENST00000340107 NUTM2DQ5VT03 806 aaPredicted RBP24.13■■□□□ 1.45
FGFR3-202ENST00000340107 RGS3P49796 1198 aa24.13■■□□□ 1.45
FGFR3-202ENST00000340107 MAPK8IP3Q9UPT6 1336 aa24.12■■□□□ 1.45
FGFR3-202ENST00000340107 NUDCQ9Y266 331 aa24.11■■□□□ 1.45
FGFR3-202ENST00000340107 MORC1Q86VD1 984 aa24.1■■□□□ 1.45
FGFR3-202ENST00000340107 KTN1Q86UP2 1357 aaKnown RBP24.1■■□□□ 1.45
FGFR3-202ENST00000340107 SOX12O15370 315 aa24.09■■□□□ 1.45
FGFR3-202ENST00000340107 MYOM3Q5VTT5 1437 aa24.09■■□□□ 1.45
FGFR3-202ENST00000340107 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
FGFR3-202ENST00000340107 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
FGFR3-202ENST00000340107 FTSJ3Q8IY81 847 aaKnown RBP24.07■■□□□ 1.44
FGFR3-202ENST00000340107 ARXQ96QS3 562 aa24.06■■□□□ 1.44
FGFR3-202ENST00000340107 CASKIN1Q8WXD9 1431 aa24.04■■□□□ 1.44
FGFR3-202ENST00000340107 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
FGFR3-202ENST00000340107 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
FGFR3-202ENST00000340107 MYH16Q9H6N6 1097 aa24.03■■□□□ 1.44
FGFR3-202ENST00000340107 LMOD2Q6P5Q4 547 aa24.03■■□□□ 1.44
FGFR3-202ENST00000340107 TRHP20396 242 aaPredicted RBP24.02■■□□□ 1.44
FGFR3-202ENST00000340107 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
FGFR3-202ENST00000340107 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
FGFR3-202ENST00000340107 PRKRIP1Q9H875 184 aaPredicted RBP24.01■■□□□ 1.43
FGFR3-202ENST00000340107 RALBP1Q15311 655 aa24.01■■□□□ 1.43
FGFR3-202ENST00000340107 NCOA2Q15596 1464 aa24.01■■□□□ 1.43
FGFR3-202ENST00000340107 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
FGFR3-202ENST00000340107 CCDC144AA2RUR9 1427 aa23.98■■□□□ 1.43
FGFR3-202ENST00000340107 RRBP1Q9P2E9 1410 aaKnown RBP23.97■■□□□ 1.43
FGFR3-202ENST00000340107 TRAK1Q9UPV9 953 aa23.97■■□□□ 1.43
FGFR3-202ENST00000340107 A0A0G2JS52 829 aa23.96■■□□□ 1.43
FGFR3-202ENST00000340107 RBM19Q9Y4C8 960 aaKnown RBP23.96■■□□□ 1.43
FGFR3-202ENST00000340107 UACAQ9BZF9 1416 aa23.95■■□□□ 1.42
FGFR3-202ENST00000340107 NLRP13Q86W25 1043 aa23.95■■□□□ 1.42
FGFR3-202ENST00000340107 RCAN3Q9UKA8 241 aa23.95■■□□□ 1.42
FGFR3-202ENST00000340107 USP47Q96K76 1375 aa23.94■■□□□ 1.42
FGFR3-202ENST00000340107 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
FGFR3-202ENST00000340107 U2AF1L5P0DN76 240 aaPredicted RBP23.93■■□□□ 1.42
FGFR3-202ENST00000340107 U2AF1Q01081 240 aaKnown RBP eCLIP23.93■■□□□ 1.42
FGFR3-202ENST00000340107 PANK3Q9H999 370 aa23.93■■□□□ 1.42
FGFR3-202ENST00000340107 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
FGFR3-202ENST00000340107 CCDC146Q8IYE0 955 aa23.9■■□□□ 1.42
FGFR3-202ENST00000340107 KIF15Q9NS87 1388 aa23.89■■□□□ 1.41
FGFR3-202ENST00000340107 ANP32EQ9BTT0 268 aa23.88■■□□□ 1.41
FGFR3-202ENST00000340107 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
FGFR3-202ENST00000340107 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
FGFR3-202ENST00000340107 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
FGFR3-202ENST00000340107 TSHZ2Q9NRE2 1034 aa23.84■■□□□ 1.41
FGFR3-202ENST00000340107 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
FGFR3-202ENST00000340107 DDRGK1Q96HY6 314 aa23.83■■□□□ 1.41
FGFR3-202ENST00000340107 HDGFP51858 240 aaKnown RBP23.83■■□□□ 1.4
FGFR3-202ENST00000340107 HDGFL2Q7Z4V5 671 aaPredicted RBP23.82■■□□□ 1.4
FGFR3-202ENST00000340107 KIF7Q2M1P5 1343 aa23.82■■□□□ 1.4
FGFR3-202ENST00000340107 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
FGFR3-202ENST00000340107 WASHC2AQ641Q2 1341 aa23.8■■□□□ 1.4
FGFR3-202ENST00000340107 NUTM2FA1L443 756 aa23.8■■□□□ 1.4
FGFR3-202ENST00000340107 BECN1Q14457 450 aa23.8■■□□□ 1.4
FGFR3-202ENST00000340107 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
FGFR3-202ENST00000340107 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
FGFR3-202ENST00000340107 HAP1P54257 671 aaPredicted RBP23.78■■□□□ 1.4
FGFR3-202ENST00000340107 EIF3AQ14152 1382 aaKnown RBP23.77■■□□□ 1.4
FGFR3-202ENST00000340107 GOLGA2Q08379 1002 aa23.76■■□□□ 1.39
FGFR3-202ENST00000340107 NOP58Q9Y2X3 529 aaKnown RBP23.75■■□□□ 1.39
FGFR3-202ENST00000340107 CCDC7Q96M83 1385 aa23.75■■□□□ 1.39
FGFR3-202ENST00000340107 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
FGFR3-202ENST00000340107 TIAM1Q13009 1591 aa23.75■■□□□ 1.39
FGFR3-202ENST00000340107 PNNQ9H307 717 aaKnown RBP23.74■■□□□ 1.39
FGFR3-202ENST00000340107 NBPF8Q3BBV2 869 aa23.74■■□□□ 1.39
FGFR3-202ENST00000340107 RRP7AQ9Y3A4 280 aaKnown RBP23.74■■□□□ 1.39
FGFR3-202ENST00000340107 ANP32BQ92688 251 aaKnown RBP23.73■■□□□ 1.39
FGFR3-202ENST00000340107 ERICH6BQ5W0A0 696 aa23.73■■□□□ 1.39
FGFR3-202ENST00000340107 CLUAP1Q96AJ1 413 aa23.73■■□□□ 1.39
FGFR3-202ENST00000340107 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
FGFR3-202ENST00000340107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.71■■□□□ 1.39
FGFR3-202ENST00000340107 PLIN1O60240 522 aa23.7■■□□□ 1.38
FGFR3-202ENST00000340107 EFCAB5A4FU69 1503 aa23.7■■□□□ 1.38
FGFR3-202ENST00000340107 MS4A1P11836 297 aa23.68■■□□□ 1.38
FGFR3-202ENST00000340107 TERF2IPQ9NYB0 399 aa23.68■■□□□ 1.38
FGFR3-202ENST00000340107 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
FGFR3-202ENST00000340107 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
FGFR3-202ENST00000340107 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
FGFR3-202ENST00000340107 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
FGFR3-202ENST00000340107 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
FGFR3-202ENST00000340107 EIF5BO60841 1220 aaKnown RBP23.66■■□□□ 1.38
FGFR3-202ENST00000340107 HFM1A2PYH4 1435 aa23.66■■□□□ 1.38
FGFR3-202ENST00000340107 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
FGFR3-202ENST00000340107 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
FGFR3-202ENST00000340107 PDE3BQ13370 1112 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms