RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
SCARB1-202ENST00000339570 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
SCARB1-202ENST00000339570 FBLN2P98095 1184 aa21.86■■□□□ 1.09
SCARB1-202ENST00000339570 NOP58Q9Y2X3 529 aaKnown RBP21.86■■□□□ 1.09
SCARB1-202ENST00000339570 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
SCARB1-202ENST00000339570 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
SCARB1-202ENST00000339570 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
SCARB1-202ENST00000339570 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
SCARB1-202ENST00000339570 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.09
SCARB1-202ENST00000339570 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
SCARB1-202ENST00000339570 PKD2Q13563 968 aa21.8■■□□□ 1.08
SCARB1-202ENST00000339570 NCOA1Q15788 1441 aa21.8■■□□□ 1.08
SCARB1-202ENST00000339570 ANP32AP39687 249 aaKnown RBP21.78■■□□□ 1.08
SCARB1-202ENST00000339570 EHBP1L1Q8N3D4 1523 aa21.77■■□□□ 1.08
SCARB1-202ENST00000339570 CFDP1Q9UEE9 299 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-202ENST00000339570 NUDCQ9Y266 331 aa21.76■■□□□ 1.07
SCARB1-202ENST00000339570 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
SCARB1-202ENST00000339570 UGGT2Q9NYU1 1516 aa21.76■■□□□ 1.07
SCARB1-202ENST00000339570 SKAP1Q86WV1 359 aa21.76■■□□□ 1.07
SCARB1-202ENST00000339570 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
SCARB1-202ENST00000339570 ANKRD30BQ9BXX2 1392 aa21.75■■□□□ 1.07
SCARB1-202ENST00000339570 CUL7Q14999 1698 aa21.75■■□□□ 1.07
SCARB1-202ENST00000339570 LAS1LQ9Y4W2 734 aaKnown RBP21.73■■□□□ 1.07
SCARB1-202ENST00000339570 ERICH6BQ5W0A0 696 aa21.73■■□□□ 1.07
SCARB1-202ENST00000339570 USP47Q96K76 1375 aa21.73■■□□□ 1.07
SCARB1-202ENST00000339570 ZBTB47Q9UFB7 747 aaPredicted RBP21.72■■□□□ 1.07
SCARB1-202ENST00000339570 EPRSP07814 1512 aaKnown RBP21.72■■□□□ 1.07
SCARB1-202ENST00000339570 RGL3Q3MIN7 710 aa21.72■■□□□ 1.07
SCARB1-202ENST00000339570 RTL5Q5HYW3 569 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-202ENST00000339570 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
SCARB1-202ENST00000339570 EXOC6Q8TAG9 804 aa21.7■■□□□ 1.06
SCARB1-202ENST00000339570 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
SCARB1-202ENST00000339570 DCAF11Q8TEB1 546 aa21.69■■□□□ 1.06
SCARB1-202ENST00000339570 RTN4Q9NQC3 1192 aaKnown RBP21.68■■□□□ 1.06
SCARB1-202ENST00000339570 PLIN1O60240 522 aa21.68■■□□□ 1.06
SCARB1-202ENST00000339570 DAPK1P53355 1430 aa21.66■■□□□ 1.06
SCARB1-202ENST00000339570 ABCC5O15440 1437 aa21.65■■□□□ 1.06
SCARB1-202ENST00000339570 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
SCARB1-202ENST00000339570 RPRD2Q5VT52 1461 aaKnown RBP21.64■■□□□ 1.05
SCARB1-202ENST00000339570 CC2D1BQ5T0F9 858 aaKnown RBP21.63■■□□□ 1.05
SCARB1-202ENST00000339570 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
SCARB1-202ENST00000339570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
SCARB1-202ENST00000339570 IPO9Q96P70 1041 aaKnown RBP21.62■■□□□ 1.05
SCARB1-202ENST00000339570 CDCA7LQ96GN5 454 aa21.62■■□□□ 1.05
SCARB1-202ENST00000339570 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
SCARB1-202ENST00000339570 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
SCARB1-202ENST00000339570 HECW1Q76N89 1606 aa21.6■■□□□ 1.05
SCARB1-202ENST00000339570 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
SCARB1-202ENST00000339570 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
SCARB1-202ENST00000339570 NUP155O75694 1391 aa21.58■■□□□ 1.04
SCARB1-202ENST00000339570 SMG6Q86US8 1419 aaKnown RBP21.57■■□□□ 1.04
SCARB1-202ENST00000339570 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
SCARB1-202ENST00000339570 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
SCARB1-202ENST00000339570 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
SCARB1-202ENST00000339570 RCAN3Q9UKA8 241 aa21.54■■□□□ 1.04
SCARB1-202ENST00000339570 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
SCARB1-202ENST00000339570 HNRNPMP52272 730 aaKnown RBP eCLIP21.54■■□□□ 1.045e-9■■■■□ 25.7
SCARB1-202ENST00000339570 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
SCARB1-202ENST00000339570 RRP1P56182 461 aaKnown RBP21.52■■□□□ 1.04
SCARB1-202ENST00000339570 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.03
SCARB1-202ENST00000339570 SLC4A3P48751 1232 aa21.51■■□□□ 1.03
SCARB1-202ENST00000339570 IQGAP2Q13576 1575 aa21.5■■□□□ 1.03
SCARB1-202ENST00000339570 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-202ENST00000339570 NEFMP07197 916 aa21.49■■□□□ 1.03
SCARB1-202ENST00000339570 NBPF1Q3BBV0 1214 aa21.49■■□□□ 1.03
SCARB1-202ENST00000339570 TSPY4P0CV99 314 aa21.47■■□□□ 1.03
SCARB1-202ENST00000339570 TSPY10P0CW01 314 aa21.47■■□□□ 1.03
SCARB1-202ENST00000339570 PDE4AP27815 886 aa21.47■■□□□ 1.03
SCARB1-202ENST00000339570 IL27Q8NEV9 243 aa21.46■■□□□ 1.03
SCARB1-202ENST00000339570 BCORL1Q5H9F3 1711 aa21.46■■□□□ 1.03
SCARB1-202ENST00000339570 PZPP20742 1482 aa21.46■■□□□ 1.03
SCARB1-202ENST00000339570 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
SCARB1-202ENST00000339570 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-202ENST00000339570 MYBBP1AQ9BQG0 1328 aaKnown RBP21.44■■□□□ 1.02
SCARB1-202ENST00000339570 KIAA1107Q9UPP5 1409 aa21.44■■□□□ 1.02
SCARB1-202ENST00000339570 WDR62O43379 1518 aa21.43■■□□□ 1.02
SCARB1-202ENST00000339570 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
SCARB1-202ENST00000339570 KIF15Q9NS87 1388 aa21.42■■□□□ 1.02
SCARB1-202ENST00000339570 MYT1LQ9UL68 1186 aa21.42■■□□□ 1.02
SCARB1-202ENST00000339570 PLB1Q6P1J6 1458 aa21.42■■□□□ 1.02
SCARB1-202ENST00000339570 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
SCARB1-202ENST00000339570 CRBNQ96SW2 442 aa21.41■■□□□ 1.02
SCARB1-202ENST00000339570 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
SCARB1-202ENST00000339570 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
SCARB1-202ENST00000339570 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
SCARB1-202ENST00000339570 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
SCARB1-202ENST00000339570 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
SCARB1-202ENST00000339570 C20orf194Q5TEA3 1177 aa21.39■■□□□ 1.01
SCARB1-202ENST00000339570 RNF123Q5XPI4 1314 aa21.37■■□□□ 1.01
SCARB1-202ENST00000339570 PANK3Q9H999 370 aa21.35■■□□□ 1.01
SCARB1-202ENST00000339570 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
SCARB1-202ENST00000339570 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
SCARB1-202ENST00000339570 RALBP1Q15311 655 aa21.35■■□□□ 1.01
SCARB1-202ENST00000339570 RGS3P49796 1198 aa21.34■■□□□ 1.01
SCARB1-202ENST00000339570 KTN1Q86UP2 1357 aaKnown RBP21.34■■□□□ 1.01
SCARB1-202ENST00000339570 DNMT1P26358 1616 aaKnown RBP21.33■■□□□ 1.01
SCARB1-202ENST00000339570 DAXXQ9UER7 740 aaPredicted RBP21.32■■□□□ 1
SCARB1-202ENST00000339570 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
SCARB1-202ENST00000339570 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.31■■□□□ 1
SCARB1-202ENST00000339570 JPH4Q96JJ6 628 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms