RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 SLC4A3P48751 1232 aa16.27■□□□□ 0.19
RIOK3-201ENST00000339486 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
RIOK3-201ENST00000339486 PLEKHD1A6NEE1 506 aa16.26■□□□□ 0.19
RIOK3-201ENST00000339486 CUX1P39880 1505 aa16.25■□□□□ 0.19
RIOK3-201ENST00000339486 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
RIOK3-201ENST00000339486 ST20-MTHFSA0A0A6YYL1 179 aa16.24■□□□□ 0.19
RIOK3-201ENST00000339486 USP35Q9P2H5 1018 aa16.24■□□□□ 0.19
RIOK3-201ENST00000339486 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
RIOK3-201ENST00000339486 MYOM3Q5VTT5 1437 aa16.23■□□□□ 0.19
RIOK3-201ENST00000339486 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
RIOK3-201ENST00000339486 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
RIOK3-201ENST00000339486 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
RIOK3-201ENST00000339486 USP47Q96K76 1375 aa16.23■□□□□ 0.19
RIOK3-201ENST00000339486 HSP90AA1P07900 732 aaKnown RBP16.23■□□□□ 0.19
RIOK3-201ENST00000339486 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
RIOK3-201ENST00000339486 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
RIOK3-201ENST00000339486 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
RIOK3-201ENST00000339486 HFM1A2PYH4 1435 aa16.21■□□□□ 0.18
RIOK3-201ENST00000339486 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.18
RIOK3-201ENST00000339486 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
RIOK3-201ENST00000339486 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
RIOK3-201ENST00000339486 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
RIOK3-201ENST00000339486 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
RIOK3-201ENST00000339486 NUP155O75694 1391 aa16.19■□□□□ 0.18
RIOK3-201ENST00000339486 KIF15Q9NS87 1388 aa16.18■□□□□ 0.18
RIOK3-201ENST00000339486 NCOA2Q15596 1464 aa16.18■□□□□ 0.18
RIOK3-201ENST00000339486 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
RIOK3-201ENST00000339486 ROCK2O75116 1388 aaKnown RBP16.17■□□□□ 0.18
RIOK3-201ENST00000339486 CRBNQ96SW2 442 aa16.17■□□□□ 0.18
RIOK3-201ENST00000339486 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
RIOK3-201ENST00000339486 TMF1P82094 1093 aa16.16■□□□□ 0.18
RIOK3-201ENST00000339486 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
RIOK3-201ENST00000339486 GSE1Q14687 1217 aa16.16■□□□□ 0.18
RIOK3-201ENST00000339486 NAIPQ13075 1403 aa16.15■□□□□ 0.18
RIOK3-201ENST00000339486 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
RIOK3-201ENST00000339486 MS4A1P11836 297 aa16.15■□□□□ 0.18
RIOK3-201ENST00000339486 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
RIOK3-201ENST00000339486 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
RIOK3-201ENST00000339486 CFTRP13569 1480 aa16.13■□□□□ 0.17
RIOK3-201ENST00000339486 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
RIOK3-201ENST00000339486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
RIOK3-201ENST00000339486 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
RIOK3-201ENST00000339486 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
RIOK3-201ENST00000339486 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
RIOK3-201ENST00000339486 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
RIOK3-201ENST00000339486 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
RIOK3-201ENST00000339486 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
RIOK3-201ENST00000339486 SPRYD3Q8NCJ5 442 aa16.1■□□□□ 0.17
RIOK3-201ENST00000339486 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
RIOK3-201ENST00000339486 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
RIOK3-201ENST00000339486 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
RIOK3-201ENST00000339486 NFKBIBQ15653 356 aa16.08■□□□□ 0.16
RIOK3-201ENST00000339486 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
RIOK3-201ENST00000339486 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
RIOK3-201ENST00000339486 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
RIOK3-201ENST00000339486 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
RIOK3-201ENST00000339486 PANK3Q9H999 370 aa16.07■□□□□ 0.16
RIOK3-201ENST00000339486 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
RIOK3-201ENST00000339486 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
RIOK3-201ENST00000339486 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
RIOK3-201ENST00000339486 CENPQQ7L2Z9 268 aaPredicted RBP16.05■□□□□ 0.16
RIOK3-201ENST00000339486 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
RIOK3-201ENST00000339486 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
RIOK3-201ENST00000339486 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
RIOK3-201ENST00000339486 L1TD1Q5T7N2 865 aaKnown RBP16.03■□□□□ 0.16
RIOK3-201ENST00000339486 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
RIOK3-201ENST00000339486 FTSJ3Q8IY81 847 aaKnown RBP16.03■□□□□ 0.16
RIOK3-201ENST00000339486 ARID4BQ4LE39 1312 aaPredicted RBP16.02■□□□□ 0.15
RIOK3-201ENST00000339486 PTPRKQ15262 1439 aa16.01■□□□□ 0.15
RIOK3-201ENST00000339486 SKAP1Q86WV1 359 aa16.01■□□□□ 0.15
RIOK3-201ENST00000339486 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
RIOK3-201ENST00000339486 HNRNPMP52272 730 aaKnown RBP eCLIP16.01■□□□□ 0.15
RIOK3-201ENST00000339486 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
RIOK3-201ENST00000339486 PRKCSHP14314 528 aaPredicted RBP16■□□□□ 0.15
RIOK3-201ENST00000339486 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
RIOK3-201ENST00000339486 EFCAB5A4FU69 1503 aa15.98■□□□□ 0.15
RIOK3-201ENST00000339486 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.154e-6■■□□□ 12.2
RIOK3-201ENST00000339486 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
RIOK3-201ENST00000339486 FRAT2O75474 233 aaPredicted RBP15.95■□□□□ 0.14
RIOK3-201ENST00000339486 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
RIOK3-201ENST00000339486 CFAP53Q96M91 514 aa15.95■□□□□ 0.14
RIOK3-201ENST00000339486 CLUAP1Q96AJ1 413 aa15.94■□□□□ 0.14
RIOK3-201ENST00000339486 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
RIOK3-201ENST00000339486 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
RIOK3-201ENST00000339486 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
RIOK3-201ENST00000339486 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
RIOK3-201ENST00000339486 APAF1O14727 1248 aa15.92■□□□□ 0.14
RIOK3-201ENST00000339486 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
RIOK3-201ENST00000339486 HSCBQ8IWL3 235 aa15.91■□□□□ 0.14
RIOK3-201ENST00000339486 COG6Q9Y2V7 657 aa15.91■□□□□ 0.14
RIOK3-201ENST00000339486 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
RIOK3-201ENST00000339486 GOLGA6L22H0YM25 854 aa15.91■□□□□ 0.14
RIOK3-201ENST00000339486 GOLGA6L3A6NEY3 463 aa15.91■□□□□ 0.14
RIOK3-201ENST00000339486 EHBP1L1Q8N3D4 1523 aa15.9■□□□□ 0.14
RIOK3-201ENST00000339486 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
RIOK3-201ENST00000339486 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
RIOK3-201ENST00000339486 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
RIOK3-201ENST00000339486 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
RIOK3-201ENST00000339486 MORC1Q86VD1 984 aa15.89■□□□□ 0.13
RIOK3-201ENST00000339486 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms