RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
CDK5RAP1-201ENST00000339269 ADCY10Q96PN6 1610 aa18.77■□□□□ 0.6
CDK5RAP1-201ENST00000339269 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP1-201ENST00000339269 RRP7BPQ9NSQ0 103 aa18.75■□□□□ 0.59
CDK5RAP1-201ENST00000339269 TROQ12816 1431 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP1-201ENST00000339269 CHIC2Q9UKJ5 165 aa18.74■□□□□ 0.59
CDK5RAP1-201ENST00000339269 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP1-201ENST00000339269 ABCC5O15440 1437 aa18.73■□□□□ 0.59
CDK5RAP1-201ENST00000339269 DAPK1P53355 1430 aa18.73■□□□□ 0.59
CDK5RAP1-201ENST00000339269 DNMT1P26358 1616 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP1-201ENST00000339269 ABCA8O94911 1581 aa18.72■□□□□ 0.59
CDK5RAP1-201ENST00000339269 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
CDK5RAP1-201ENST00000339269 ROCK1Q13464 1354 aa18.7■□□□□ 0.58
CDK5RAP1-201ENST00000339269 KIF14Q15058 1648 aa18.7■□□□□ 0.58
CDK5RAP1-201ENST00000339269 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
CDK5RAP1-201ENST00000339269 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
CDK5RAP1-201ENST00000339269 NPM1P06748 294 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDK5RAP1-201ENST00000339269 GPATCH8Q9UKJ3 1502 aaKnown RBP18.67■□□□□ 0.58
CDK5RAP1-201ENST00000339269 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
CDK5RAP1-201ENST00000339269 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP1-201ENST00000339269 TONSLQ96HA7 1378 aa18.65■□□□□ 0.58
CDK5RAP1-201ENST00000339269 CAMSAP2Q08AD1 1489 aa18.64■□□□□ 0.57
CDK5RAP1-201ENST00000339269 ATP10BO94823 1461 aa18.63■□□□□ 0.57
CDK5RAP1-201ENST00000339269 ABCC10Q5T3U5 1492 aa18.62■□□□□ 0.57
CDK5RAP1-201ENST00000339269 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP1-201ENST00000339269 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP1-201ENST00000339269 ITSN2Q9NZM3 1697 aa18.61■□□□□ 0.57
CDK5RAP1-201ENST00000339269 MPHOSPH9Q99550 1183 aa18.58■□□□□ 0.57
CDK5RAP1-201ENST00000339269 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
CDK5RAP1-201ENST00000339269 CROCC2H7BZ55 1655 aa18.57■□□□□ 0.56
CDK5RAP1-201ENST00000339269 KIF13AQ9H1H9 1805 aa18.56■□□□□ 0.56
CDK5RAP1-201ENST00000339269 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
CDK5RAP1-201ENST00000339269 HIRIP3Q9BW71 556 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP1-201ENST00000339269 NCOA1Q15788 1441 aa18.56■□□□□ 0.56
CDK5RAP1-201ENST00000339269 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP1-201ENST00000339269 CDC42BPAQ5VT25 1732 aa18.55■□□□□ 0.56
CDK5RAP1-201ENST00000339269 ANKRD30BQ9BXX2 1392 aa18.54■□□□□ 0.56
CDK5RAP1-201ENST00000339269 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
CDK5RAP1-201ENST00000339269 PZPP20742 1482 aa18.53■□□□□ 0.56
CDK5RAP1-201ENST00000339269 ADGBQ8N7X0 1667 aa18.53■□□□□ 0.56
CDK5RAP1-201ENST00000339269 FOXD1Q16676 465 aa18.52■□□□□ 0.56
CDK5RAP1-201ENST00000339269 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
CDK5RAP1-201ENST00000339269 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
CDK5RAP1-201ENST00000339269 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
CDK5RAP1-201ENST00000339269 TEX14Q8IWB6 1497 aa18.49■□□□□ 0.55
CDK5RAP1-201ENST00000339269 RPRD2Q5VT52 1461 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP1-201ENST00000339269 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
CDK5RAP1-201ENST00000339269 SHANK2Q9UPX8 1470 aa18.47■□□□□ 0.55
CDK5RAP1-201ENST00000339269 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
CDK5RAP1-201ENST00000339269 L3MBTL2Q969R5 705 aa18.45■□□□□ 0.54
CDK5RAP1-201ENST00000339269 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP1-201ENST00000339269 TSPOAP1O95153 1857 aa18.45■□□□□ 0.54
CDK5RAP1-201ENST00000339269 WDR7Q9Y4E6 1490 aa18.44■□□□□ 0.54
CDK5RAP1-201ENST00000339269 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
CDK5RAP1-201ENST00000339269 ANKRD30AQ9BXX3 1397 aa18.41■□□□□ 0.54
CDK5RAP1-201ENST00000339269 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
CDK5RAP1-201ENST00000339269 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
CDK5RAP1-201ENST00000339269 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP1-201ENST00000339269 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
CDK5RAP1-201ENST00000339269 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.54
CDK5RAP1-201ENST00000339269 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.53
CDK5RAP1-201ENST00000339269 PREX2Q70Z35 1606 aa18.39■□□□□ 0.53
CDK5RAP1-201ENST00000339269 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
CDK5RAP1-201ENST00000339269 CDC42BPBQ9Y5S2 1711 aa18.39■□□□□ 0.53
CDK5RAP1-201ENST00000339269 GLI2P10070 1586 aa18.38■□□□□ 0.53
CDK5RAP1-201ENST00000339269 KIAA1107Q9UPP5 1409 aa18.37■□□□□ 0.53
CDK5RAP1-201ENST00000339269 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
CDK5RAP1-201ENST00000339269 TTC37Q6PGP7 1564 aa18.36■□□□□ 0.53
CDK5RAP1-201ENST00000339269 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
CDK5RAP1-201ENST00000339269 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
CDK5RAP1-201ENST00000339269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.53
CDK5RAP1-201ENST00000339269 CCER2I3L3R5 266 aa18.33■□□□□ 0.52
CDK5RAP1-201ENST00000339269 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.52
CDK5RAP1-201ENST00000339269 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.52
CDK5RAP1-201ENST00000339269 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
CDK5RAP1-201ENST00000339269 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP1-201ENST00000339269 PKD2Q13563 968 aa18.3■□□□□ 0.52
CDK5RAP1-201ENST00000339269 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
CDK5RAP1-201ENST00000339269 C11orf95C9JLR9 678 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP1-201ENST00000339269 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDK5RAP1-201ENST00000339269 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
CDK5RAP1-201ENST00000339269 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
CDK5RAP1-201ENST00000339269 ANP32CO43423 234 aa18.27■□□□□ 0.52
CDK5RAP1-201ENST00000339269 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
CDK5RAP1-201ENST00000339269 NUP155O75694 1391 aa18.26■□□□□ 0.51
CDK5RAP1-201ENST00000339269 CD109Q6YHK3 1445 aa18.26■□□□□ 0.51
CDK5RAP1-201ENST00000339269 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
CDK5RAP1-201ENST00000339269 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
CDK5RAP1-201ENST00000339269 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
CDK5RAP1-201ENST00000339269 ARHGAP5Q13017 1502 aa18.23■□□□□ 0.51
CDK5RAP1-201ENST00000339269 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
CDK5RAP1-201ENST00000339269 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
CDK5RAP1-201ENST00000339269 UHRF1BP1Q6BDS2 1440 aa18.21■□□□□ 0.51
CDK5RAP1-201ENST00000339269 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
CDK5RAP1-201ENST00000339269 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
CDK5RAP1-201ENST00000339269 RSPH4AQ5TD94 716 aa18.19■□□□□ 0.5
CDK5RAP1-201ENST00000339269 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
CDK5RAP1-201ENST00000339269 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP1-201ENST00000339269 UNC13BO14795 1591 aa18.18■□□□□ 0.5
CDK5RAP1-201ENST00000339269 PLCH2O75038 1416 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms