RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ZNF644Q9H582 1327 aaPredicted RBP26.71■■□□□ 1.87
PSPC1-201ENST00000338910 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
PSPC1-201ENST00000338910 ADCY10Q96PN6 1610 aa26.66■■□□□ 1.86
PSPC1-201ENST00000338910 UACAQ9BZF9 1416 aa26.65■■□□□ 1.86
PSPC1-201ENST00000338910 CFDP1Q9UEE9 299 aaPredicted RBP26.65■■□□□ 1.86
PSPC1-201ENST00000338910 GPATCH8Q9UKJ3 1502 aaKnown RBP26.64■■□□□ 1.86
PSPC1-201ENST00000338910 KCNH8Q96L42 1107 aa26.6■■□□□ 1.85
PSPC1-201ENST00000338910 DAPK1P53355 1430 aa26.6■■□□□ 1.85
PSPC1-201ENST00000338910 ZNF777Q9ULD5 760 aaPredicted RBP26.59■■□□□ 1.85
PSPC1-201ENST00000338910 ITSN2Q9NZM3 1697 aa26.59■■□□□ 1.85
PSPC1-201ENST00000338910 ABCC5O15440 1437 aa26.57■■□□□ 1.84
PSPC1-201ENST00000338910 CAMSAP2Q08AD1 1489 aa26.56■■□□□ 1.84
PSPC1-201ENST00000338910 TRIM52Q96A61 297 aa26.56■■□□□ 1.84
PSPC1-201ENST00000338910 DNMT1P26358 1616 aaKnown RBP26.55■■□□□ 1.84
PSPC1-201ENST00000338910 TIMELESSQ9UNS1 1208 aa26.55■■□□□ 1.84
PSPC1-201ENST00000338910 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
PSPC1-201ENST00000338910 AKNAQ7Z591 1439 aa26.54■■□□□ 1.84
PSPC1-201ENST00000338910 GCC2Q8IWJ2 1684 aa26.53■■□□□ 1.84
PSPC1-201ENST00000338910 ABCC2Q92887 1545 aa26.52■■□□□ 1.84
PSPC1-201ENST00000338910 CDC42BPAQ5VT25 1732 aa26.51■■□□□ 1.83
PSPC1-201ENST00000338910 BCL11AQ9H165 835 aa26.5■■□□□ 1.83
PSPC1-201ENST00000338910 KDM6BO15054 1643 aa26.5■■□□□ 1.83
PSPC1-201ENST00000338910 PPP1R15AO75807 674 aaPredicted RBP26.49■■□□□ 1.83
PSPC1-201ENST00000338910 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
PSPC1-201ENST00000338910 BCANQ96GW7 911 aa26.47■■□□□ 1.83
PSPC1-201ENST00000338910 TONSLQ96HA7 1378 aa26.45■■□□□ 1.83
PSPC1-201ENST00000338910 FKBP8Q14318 412 aa26.45■■□□□ 1.83
PSPC1-201ENST00000338910 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
PSPC1-201ENST00000338910 UHRF1BP1LA0JNW5 1464 aa26.37■■□□□ 1.81
PSPC1-201ENST00000338910 DENND4BO75064 1496 aaPredicted RBP26.37■■□□□ 1.81
PSPC1-201ENST00000338910 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
PSPC1-201ENST00000338910 FOXD1Q16676 465 aa26.36■■□□□ 1.81
PSPC1-201ENST00000338910 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
PSPC1-201ENST00000338910 ZCCHC11Q5TAX3 1644 aaKnown RBP26.35■■□□□ 1.81
PSPC1-201ENST00000338910 CROCC2H7BZ55 1655 aa26.34■■□□□ 1.81
PSPC1-201ENST00000338910 KDM5BQ9UGL1 1544 aa26.34■■□□□ 1.81
PSPC1-201ENST00000338910 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
PSPC1-201ENST00000338910 HNRNPMP52272 730 aaKnown RBP eCLIP26.34■■□□□ 1.81
PSPC1-201ENST00000338910 HIRIP3Q9BW71 556 aaPredicted RBP26.34■■□□□ 1.81
PSPC1-201ENST00000338910 RBM19Q9Y4C8 960 aaKnown RBP26.34■■□□□ 1.81
PSPC1-201ENST00000338910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.34■■□□□ 1.81
PSPC1-201ENST00000338910 TTC37Q6PGP7 1564 aa26.33■■□□□ 1.81
PSPC1-201ENST00000338910 DDX10Q13206 875 aaKnown RBP26.32■■□□□ 1.8
PSPC1-201ENST00000338910 PREX2Q70Z35 1606 aa26.32■■□□□ 1.8
PSPC1-201ENST00000338910 ADGBQ8N7X0 1667 aa26.31■■□□□ 1.8
PSPC1-201ENST00000338910 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
PSPC1-201ENST00000338910 ANKRD30AQ9BXX3 1397 aa26.29■■□□□ 1.8
PSPC1-201ENST00000338910 TSPY4P0CV99 314 aa26.28■■□□□ 1.8
PSPC1-201ENST00000338910 TSPY10P0CW01 314 aa26.28■■□□□ 1.8
PSPC1-201ENST00000338910 SAMD9LQ8IVG5 1584 aa26.28■■□□□ 1.8
PSPC1-201ENST00000338910 C9orf84Q5VXU9 1444 aa26.27■■□□□ 1.8
PSPC1-201ENST00000338910 NEFLP07196 543 aa26.27■■□□□ 1.8
PSPC1-201ENST00000338910 MBD5Q9P267 1494 aa26.26■■□□□ 1.8
PSPC1-201ENST00000338910 SLC4A1APQ9BWU0 796 aaKnown RBP26.26■■□□□ 1.79
PSPC1-201ENST00000338910 ARHGAP5Q13017 1502 aa26.25■■□□□ 1.79
PSPC1-201ENST00000338910 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
PSPC1-201ENST00000338910 CCER2I3L3R5 266 aa26.22■■□□□ 1.79
PSPC1-201ENST00000338910 ARHGEF5Q12774 1597 aa26.22■■□□□ 1.79
PSPC1-201ENST00000338910 MYO5CQ9NQX4 1742 aa26.21■■□□□ 1.79
PSPC1-201ENST00000338910 ANKRD50Q9ULJ7 1429 aa26.2■■□□□ 1.78
PSPC1-201ENST00000338910 CCDC141Q6ZP82 1450 aa26.19■■□□□ 1.78
PSPC1-201ENST00000338910 SYCP2Q9BX26 1530 aa26.18■■□□□ 1.78
PSPC1-201ENST00000338910 RSPH4AQ5TD94 716 aa26.17■■□□□ 1.78
PSPC1-201ENST00000338910 ANKRD30BQ9BXX2 1392 aa26.17■■□□□ 1.78
PSPC1-201ENST00000338910 L3MBTL2Q969R5 705 aa26.15■■□□□ 1.78
PSPC1-201ENST00000338910 PLCH2O75038 1416 aa26.15■■□□□ 1.78
PSPC1-201ENST00000338910 KIF15Q9NS87 1388 aa26.14■■□□□ 1.78
PSPC1-201ENST00000338910 PZPP20742 1482 aa26.13■■□□□ 1.77
PSPC1-201ENST00000338910 WDR7Q9Y4E6 1490 aa26.11■■□□□ 1.77
PSPC1-201ENST00000338910 EFCAB2Q5VUJ9 269 aa26.1■■□□□ 1.77
PSPC1-201ENST00000338910 ANP32CO43423 234 aa26.09■■□□□ 1.77
PSPC1-201ENST00000338910 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
PSPC1-201ENST00000338910 ARHGEF12Q9NZN5 1544 aa26.08■■□□□ 1.77
PSPC1-201ENST00000338910 PLEKHH2Q8IVE3 1493 aa26.08■■□□□ 1.77
PSPC1-201ENST00000338910 MSH5O43196 834 aa26.07■■□□□ 1.76
PSPC1-201ENST00000338910 PKD2Q13563 968 aa26.06■■□□□ 1.76
PSPC1-201ENST00000338910 RPRD2Q5VT52 1461 aaKnown RBP26.06■■□□□ 1.76
PSPC1-201ENST00000338910 NUP155O75694 1391 aa26.05■■□□□ 1.76
PSPC1-201ENST00000338910 ASXL2Q76L83 1435 aa26.03■■□□□ 1.76
PSPC1-201ENST00000338910 MAST1Q9Y2H9 1570 aa26.01■■□□□ 1.75
PSPC1-201ENST00000338910 NPM1P06748 294 aaKnown RBP eCLIP26■■□□□ 1.75
PSPC1-201ENST00000338910 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
PSPC1-201ENST00000338910 FANCIQ9NVI1 1328 aa25.98■■□□□ 1.75
PSPC1-201ENST00000338910 ABCC1P33527 1531 aa25.98■■□□□ 1.75
PSPC1-201ENST00000338910 NBPF8Q3BBV2 869 aa25.97■■□□□ 1.75
PSPC1-201ENST00000338910 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
PSPC1-201ENST00000338910 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.75
PSPC1-201ENST00000338910 ABCA9Q8IUA7 1624 aa25.95■■□□□ 1.74
PSPC1-201ENST00000338910 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
PSPC1-201ENST00000338910 TEX14Q8IWB6 1497 aa25.94■■□□□ 1.74
PSPC1-201ENST00000338910 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
PSPC1-201ENST00000338910 AFAP1Q8N556 730 aa25.93■■□□□ 1.74
PSPC1-201ENST00000338910 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
PSPC1-201ENST00000338910 FANCAO15360 1455 aa25.92■■□□□ 1.74
PSPC1-201ENST00000338910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.87■■□□□ 1.733e-7■■■■□ 22.7
PSPC1-201ENST00000338910 SPAG9O60271 1321 aaKnown RBP25.86■■□□□ 1.73
PSPC1-201ENST00000338910 DUOX2Q9NRD8 1548 aa25.86■■□□□ 1.73
PSPC1-201ENST00000338910 FAM135AQ9P2D6 1515 aa25.86■■□□□ 1.73
PSPC1-201ENST00000338910 WASHC2AQ641Q2 1341 aa25.85■■□□□ 1.73
PSPC1-201ENST00000338910 ZNF326Q5BKZ1 582 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms