RNA–Protein interactions for RNA: ENST00000338733.9

TBCCD1-201, Transcript of TBCC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCCD1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-201ENST00000338733 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
TBCCD1-201ENST00000338733 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.08
TBCCD1-201ENST00000338733 SETD1BQ9UPS6 1966 aaKnown RBP15.58■□□□□ 0.08
TBCCD1-201ENST00000338733 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
TBCCD1-201ENST00000338733 MLECQ14165 292 aa15.56■□□□□ 0.08
TBCCD1-201ENST00000338733 NCOA1Q15788 1441 aa15.54■□□□□ 0.08
TBCCD1-201ENST00000338733 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
TBCCD1-201ENST00000338733 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
TBCCD1-201ENST00000338733 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
TBCCD1-201ENST00000338733 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.08
TBCCD1-201ENST00000338733 SAMD9Q5K651 1589 aa15.52■□□□□ 0.07
TBCCD1-201ENST00000338733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.07
TBCCD1-201ENST00000338733 CEBPAP49715 358 aaPredicted RBP15.51■□□□□ 0.07
TBCCD1-201ENST00000338733 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
TBCCD1-201ENST00000338733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
TBCCD1-201ENST00000338733 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
TBCCD1-201ENST00000338733 REREQ9P2R6 1566 aa15.5■□□□□ 0.07
TBCCD1-201ENST00000338733 SCAPERQ9BY12 1400 aa15.5■□□□□ 0.07
TBCCD1-201ENST00000338733 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
TBCCD1-201ENST00000338733 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
TBCCD1-201ENST00000338733 PLCH2O75038 1416 aa15.48■□□□□ 0.07
TBCCD1-201ENST00000338733 AGLP35573 1532 aa15.45■□□□□ 0.06
TBCCD1-201ENST00000338733 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
TBCCD1-201ENST00000338733 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
TBCCD1-201ENST00000338733 NPATQ14207 1427 aa15.43■□□□□ 0.06
TBCCD1-201ENST00000338733 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
TBCCD1-201ENST00000338733 C3P01024 1663 aa15.42■□□□□ 0.06
TBCCD1-201ENST00000338733 PKD2Q13563 968 aa15.42■□□□□ 0.06
TBCCD1-201ENST00000338733 KDM5CP41229 1560 aa15.41■□□□□ 0.06
TBCCD1-201ENST00000338733 PLA2R1Q13018 1463 aa15.41■□□□□ 0.06
TBCCD1-201ENST00000338733 EFCAB2Q5VUJ9 269 aa15.41■□□□□ 0.06
TBCCD1-201ENST00000338733 CAMSAP1Q5T5Y3 1602 aa15.39■□□□□ 0.05
TBCCD1-201ENST00000338733 ESF1Q9H501 851 aaKnown RBP15.38■□□□□ 0.05
TBCCD1-201ENST00000338733 ZNF335Q9H4Z2 1342 aaPredicted RBP15.37■□□□□ 0.05
TBCCD1-201ENST00000338733 MLH3Q9UHC1 1453 aa15.36■□□□□ 0.05
TBCCD1-201ENST00000338733 DIP2CQ9Y2E4 1556 aa15.36■□□□□ 0.05
TBCCD1-201ENST00000338733 HSPA1LP34931 641 aa15.35■□□□□ 0.05
TBCCD1-201ENST00000338733 TOM1O60784 492 aa15.35■□□□□ 0.05
TBCCD1-201ENST00000338733 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
TBCCD1-201ENST00000338733 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
TBCCD1-201ENST00000338733 MROH2AA6NES4 1674 aa15.33■□□□□ 0.05
TBCCD1-201ENST00000338733 CPS1P31327 1500 aa15.32■□□□□ 0.04
TBCCD1-201ENST00000338733 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
TBCCD1-201ENST00000338733 NCKAP5LQ9HCH0 1330 aa15.31■□□□□ 0.04
TBCCD1-201ENST00000338733 ZNF142P52746 1687 aaPredicted RBP15.3■□□□□ 0.04
TBCCD1-201ENST00000338733 MYO5CQ9NQX4 1742 aa15.29■□□□□ 0.04
TBCCD1-201ENST00000338733 PTPRKQ15262 1439 aa15.28■□□□□ 0.04
TBCCD1-201ENST00000338733 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
TBCCD1-201ENST00000338733 ABCA6Q8N139 1617 aa15.27■□□□□ 0.04
TBCCD1-201ENST00000338733 AFAP1Q8N556 730 aa15.26■□□□□ 0.03
TBCCD1-201ENST00000338733 ZMYM3Q14202 1370 aa15.25■□□□□ 0.03
TBCCD1-201ENST00000338733 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
TBCCD1-201ENST00000338733 CEP170BQ9Y4F5 1589 aaPredicted RBP15.22■□□□□ 0.03
TBCCD1-201ENST00000338733 PIP4K2BP78356 416 aa15.22■□□□□ 0.03
TBCCD1-201ENST00000338733 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
TBCCD1-201ENST00000338733 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
TBCCD1-201ENST00000338733 MYO3AQ8NEV4 1616 aa15.22■□□□□ 0.03
TBCCD1-201ENST00000338733 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.03
TBCCD1-201ENST00000338733 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
TBCCD1-201ENST00000338733 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.02
TBCCD1-201ENST00000338733 KIF14Q15058 1648 aa15.2■□□□□ 0.02
TBCCD1-201ENST00000338733 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
TBCCD1-201ENST00000338733 TROQ12816 1431 aaPredicted RBP15.18■□□□□ 0.02
TBCCD1-201ENST00000338733 A2ML1A8K2U0 1454 aa15.18■□□□□ 0.02
TBCCD1-201ENST00000338733 CLIP1P30622 1438 aa15.17■□□□□ 0.02
TBCCD1-201ENST00000338733 ABCC1P33527 1531 aa15.17■□□□□ 0.02
TBCCD1-201ENST00000338733 KIDINS220Q9ULH0 1771 aa15.14■□□□□ 0.01
TBCCD1-201ENST00000338733 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
TBCCD1-201ENST00000338733 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
TBCCD1-201ENST00000338733 RGS17Q9UGC6 210 aaPredicted RBP15.13■□□□□ 0.01
TBCCD1-201ENST00000338733 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
TBCCD1-201ENST00000338733 ITSN2Q9NZM3 1697 aa15.13■□□□□ 0.01
TBCCD1-201ENST00000338733 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
TBCCD1-201ENST00000338733 EEA1Q15075 1411 aa15.11■□□□□ 0.01
TBCCD1-201ENST00000338733 VWDEQ8N2E2 1590 aa15.11■□□□□ 0.01
TBCCD1-201ENST00000338733 NEURL4Q96JN8 1562 aa15.11■□□□□ 0.01
TBCCD1-201ENST00000338733 PREX2Q70Z35 1606 aa15.09■□□□□ 0.01
TBCCD1-201ENST00000338733 POLR1AO95602 1720 aaPredicted RBP15.09■□□□□ 0.01
TBCCD1-201ENST00000338733 CDC42BPBQ9Y5S2 1711 aa15.09■□□□□ 0.01
TBCCD1-201ENST00000338733 MED14O60244 1454 aa15.09■□□□□ 0.01
TBCCD1-201ENST00000338733 PLXNC1O60486 1568 aa15.08■□□□□ 0.01
TBCCD1-201ENST00000338733 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0.01
TBCCD1-201ENST00000338733 SAMD9LQ8IVG5 1584 aa15.08■□□□□ 0
TBCCD1-201ENST00000338733 RNF17Q9BXT8 1623 aaKnown RBP15.06■□□□□ 0
TBCCD1-201ENST00000338733 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
TBCCD1-201ENST00000338733 DEPDC5O75140 1603 aa15.05■□□□□ 0
TBCCD1-201ENST00000338733 SYNMO15061 1565 aa15.05■□□□□ -0
TBCCD1-201ENST00000338733 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
TBCCD1-201ENST00000338733 A2MP01023 1474 aa15.04■□□□□ -0
TBCCD1-201ENST00000338733 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
TBCCD1-201ENST00000338733 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
TBCCD1-201ENST00000338733 LRRC7Q96NW7 1537 aa15.02■□□□□ -0
TBCCD1-201ENST00000338733 RANGAP1P46060 587 aaPredicted RBP15.02□□□□□ -0.01
TBCCD1-201ENST00000338733 THEMISQ8N1K5 641 aaPredicted RBP15.02□□□□□ -0.01
TBCCD1-201ENST00000338733 KIAA1107Q9UPP5 1409 aa15.01□□□□□ -0.01
TBCCD1-201ENST00000338733 TNRQ92752 1358 aa15.01□□□□□ -0.01
TBCCD1-201ENST00000338733 ATP7AQ04656 1500 aa15□□□□□ -0.01
TBCCD1-201ENST00000338733 POTEAQ6S8J7 498 aa15□□□□□ -0.01
TBCCD1-201ENST00000338733 PLEKHH2Q8IVE3 1493 aa15□□□□□ -0.01
TBCCD1-201ENST00000338733 NLRP1Q9C000 1473 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms