RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 CDC42BPAQ5VT25 1732 aa23.89■■□□□ 1.41
HPS1-202ENST00000338546 ABCC5O15440 1437 aa23.88■■□□□ 1.41
HPS1-202ENST00000338546 MAPKBP1O60336 1514 aa23.85■■□□□ 1.41
HPS1-202ENST00000338546 ZCCHC11Q5TAX3 1644 aaKnown RBP23.83■■□□□ 1.4
HPS1-202ENST00000338546 ZNF644Q9H582 1327 aaPredicted RBP23.81■■□□□ 1.4
HPS1-202ENST00000338546 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
HPS1-202ENST00000338546 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
HPS1-202ENST00000338546 ADGRL2O95490 1459 aa23.78■■□□□ 1.4
HPS1-202ENST00000338546 SHANK2Q9UPX8 1470 aa23.77■■□□□ 1.4
HPS1-202ENST00000338546 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
HPS1-202ENST00000338546 CROCC2H7BZ55 1655 aa23.77■■□□□ 1.4
HPS1-202ENST00000338546 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
HPS1-202ENST00000338546 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
HPS1-202ENST00000338546 RRP7BPQ9NSQ0 103 aa23.76■■□□□ 1.39
HPS1-202ENST00000338546 TIMELESSQ9UNS1 1208 aa23.76■■□□□ 1.39
HPS1-202ENST00000338546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.39
HPS1-202ENST00000338546 ARHGEF5Q12774 1597 aa23.76■■□□□ 1.39
HPS1-202ENST00000338546 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
HPS1-202ENST00000338546 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
HPS1-202ENST00000338546 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
HPS1-202ENST00000338546 MYO5CQ9NQX4 1742 aa23.71■■□□□ 1.39
HPS1-202ENST00000338546 TTC37Q6PGP7 1564 aa23.7■■□□□ 1.39
HPS1-202ENST00000338546 PLEKHH2Q8IVE3 1493 aa23.7■■□□□ 1.38
HPS1-202ENST00000338546 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
HPS1-202ENST00000338546 MBD5Q9P267 1494 aa23.67■■□□□ 1.38
HPS1-202ENST00000338546 SAMD9LQ8IVG5 1584 aa23.67■■□□□ 1.38
HPS1-202ENST00000338546 PLCH2O75038 1416 aa23.66■■□□□ 1.38
HPS1-202ENST00000338546 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
HPS1-202ENST00000338546 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
HPS1-202ENST00000338546 ARAP3Q8WWN8 1544 aa23.66■■□□□ 1.38
HPS1-202ENST00000338546 ARHGAP5Q13017 1502 aa23.65■■□□□ 1.38
HPS1-202ENST00000338546 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
HPS1-202ENST00000338546 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
HPS1-202ENST00000338546 WDR7Q9Y4E6 1490 aa23.64■■□□□ 1.38
HPS1-202ENST00000338546 CCDC141Q6ZP82 1450 aa23.64■■□□□ 1.37
HPS1-202ENST00000338546 KDM6BO15054 1643 aa23.63■■□□□ 1.37
HPS1-202ENST00000338546 C9orf84Q5VXU9 1444 aa23.63■■□□□ 1.37
HPS1-202ENST00000338546 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
HPS1-202ENST00000338546 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
HPS1-202ENST00000338546 MAST1Q9Y2H9 1570 aa23.59■■□□□ 1.37
HPS1-202ENST00000338546 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.37
HPS1-202ENST00000338546 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
HPS1-202ENST00000338546 HNRNPMP52272 730 aaKnown RBP eCLIP23.57■■□□□ 1.36
HPS1-202ENST00000338546 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
HPS1-202ENST00000338546 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
HPS1-202ENST00000338546 ANKRD50Q9ULJ7 1429 aa23.55■■□□□ 1.36
HPS1-202ENST00000338546 ABCA9Q8IUA7 1624 aa23.55■■□□□ 1.36
HPS1-202ENST00000338546 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
HPS1-202ENST00000338546 SYCP2Q9BX26 1530 aa23.54■■□□□ 1.36
HPS1-202ENST00000338546 ASXL2Q76L83 1435 aa23.53■■□□□ 1.36
HPS1-202ENST00000338546 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
HPS1-202ENST00000338546 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
HPS1-202ENST00000338546 ABCC1P33527 1531 aa23.49■■□□□ 1.35
HPS1-202ENST00000338546 KIF15Q9NS87 1388 aa23.49■■□□□ 1.35
HPS1-202ENST00000338546 PLXNC1O60486 1568 aa23.47■■□□□ 1.35
HPS1-202ENST00000338546 KDM5DQ9BY66 1539 aa23.46■■□□□ 1.35
HPS1-202ENST00000338546 TONSLQ96HA7 1378 aa23.46■■□□□ 1.35
HPS1-202ENST00000338546 PPP1R15AO75807 674 aaPredicted RBP23.44■■□□□ 1.34
HPS1-202ENST00000338546 PZPP20742 1482 aa23.44■■□□□ 1.34
HPS1-202ENST00000338546 ARHGEF12Q9NZN5 1544 aa23.44■■□□□ 1.34
HPS1-202ENST00000338546 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
HPS1-202ENST00000338546 ANKRD30BQ9BXX2 1392 aa23.42■■□□□ 1.34
HPS1-202ENST00000338546 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
HPS1-202ENST00000338546 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
HPS1-202ENST00000338546 FANCAO15360 1455 aa23.39■■□□□ 1.34
HPS1-202ENST00000338546 DUOX2Q9NRD8 1548 aa23.38■■□□□ 1.33
HPS1-202ENST00000338546 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
HPS1-202ENST00000338546 NUP155O75694 1391 aa23.35■■□□□ 1.33
HPS1-202ENST00000338546 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
HPS1-202ENST00000338546 TRAPPC8Q9Y2L5 1435 aa23.34■■□□□ 1.33
HPS1-202ENST00000338546 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
HPS1-202ENST00000338546 UNC13BO14795 1591 aa23.32■■□□□ 1.32
HPS1-202ENST00000338546 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
HPS1-202ENST00000338546 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
HPS1-202ENST00000338546 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
HPS1-202ENST00000338546 SPAG9O60271 1321 aaKnown RBP23.3■■□□□ 1.32
HPS1-202ENST00000338546 ADGRL1O94910 1474 aa23.29■■□□□ 1.32
HPS1-202ENST00000338546 CD109Q6YHK3 1445 aa23.29■■□□□ 1.32
HPS1-202ENST00000338546 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
HPS1-202ENST00000338546 PKD2Q13563 968 aa23.27■■□□□ 1.32
HPS1-202ENST00000338546 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
HPS1-202ENST00000338546 MAGI2Q86UL8 1455 aa23.26■■□□□ 1.31
HPS1-202ENST00000338546 FOXD1Q16676 465 aa23.26■■□□□ 1.31
HPS1-202ENST00000338546 INO80Q9ULG1 1556 aaPredicted RBP23.25■■□□□ 1.31
HPS1-202ENST00000338546 FAM135AQ9P2D6 1515 aa23.25■■□□□ 1.31
HPS1-202ENST00000338546 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
HPS1-202ENST00000338546 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
HPS1-202ENST00000338546 ATP7AQ04656 1500 aa23.22■■□□□ 1.31
HPS1-202ENST00000338546 GLI2P10070 1586 aa23.22■■□□□ 1.31
HPS1-202ENST00000338546 NEO1Q92859 1461 aa23.22■■□□□ 1.31
HPS1-202ENST00000338546 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
HPS1-202ENST00000338546 ZNF518AQ6AHZ1 1483 aa23.2■■□□□ 1.31
HPS1-202ENST00000338546 TEX14Q8IWB6 1497 aa23.2■■□□□ 1.31
HPS1-202ENST00000338546 L3MBTL2Q969R5 705 aa23.18■■□□□ 1.3
HPS1-202ENST00000338546 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
HPS1-202ENST00000338546 MAP3K4Q9Y6R4 1608 aa23.15■■□□□ 1.3
HPS1-202ENST00000338546 POGZQ7Z3K3 1410 aa23.14■■□□□ 1.3
HPS1-202ENST00000338546 KDM5CP41229 1560 aa23.14■■□□□ 1.29
HPS1-202ENST00000338546 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
HPS1-202ENST00000338546 MLH3Q9UHC1 1453 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms