RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
CPM-201ENST00000338356 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
CPM-201ENST00000338356 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
CPM-201ENST00000338356 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
CPM-201ENST00000338356 MSNP26038 577 aaKnown RBP10.99□□□□□ -0.65
CPM-201ENST00000338356 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
CPM-201ENST00000338356 HSCBQ8IWL3 235 aa10.99□□□□□ -0.65
CPM-201ENST00000338356 TDRD9Q8NDG6 1382 aaKnown RBP10.99□□□□□ -0.65
CPM-201ENST00000338356 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
CPM-201ENST00000338356 CFAP53Q96M91 514 aa10.98□□□□□ -0.65
CPM-201ENST00000338356 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
CPM-201ENST00000338356 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
CPM-201ENST00000338356 GOLGA6L6A8MZA4 724 aa10.96□□□□□ -0.66
CPM-201ENST00000338356 PTPRGP23470 1445 aa10.96□□□□□ -0.66
CPM-201ENST00000338356 TNIKQ9UKE5 1360 aa10.96□□□□□ -0.66
CPM-201ENST00000338356 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
CPM-201ENST00000338356 POGZQ7Z3K3 1410 aa10.95□□□□□ -0.66
CPM-201ENST00000338356 DRC7Q8IY82 874 aa10.94□□□□□ -0.66
CPM-201ENST00000338356 MAPK8IP3Q9UPT6 1336 aa10.94□□□□□ -0.66
CPM-201ENST00000338356 NAP1L2Q9ULW6 460 aaPredicted RBP10.94□□□□□ -0.66
CPM-201ENST00000338356 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
CPM-201ENST00000338356 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
CPM-201ENST00000338356 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
CPM-201ENST00000338356 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
CPM-201ENST00000338356 SPAG9O60271 1321 aaKnown RBP10.92□□□□□ -0.66
CPM-201ENST00000338356 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
CPM-201ENST00000338356 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
CPM-201ENST00000338356 PNNQ9H307 717 aaKnown RBP10.91□□□□□ -0.66
CPM-201ENST00000338356 DMRT2Q9Y5R5 561 aa10.91□□□□□ -0.66
CPM-201ENST00000338356 HSPA5P11021 654 aaKnown RBP10.91□□□□□ -0.66
CPM-201ENST00000338356 CHAF1AQ13111 956 aaPredicted RBP10.91□□□□□ -0.66
CPM-201ENST00000338356 EVA1CP58658 441 aa10.9□□□□□ -0.66
CPM-201ENST00000338356 HMGB2P26583 209 aaKnown RBP10.9□□□□□ -0.66
CPM-201ENST00000338356 OS9Q13438 667 aaPredicted RBP10.9□□□□□ -0.66
CPM-201ENST00000338356 ATF3P18847 181 aa10.89□□□□□ -0.67
CPM-201ENST00000338356 U2SURPO15042 1029 aaKnown RBP10.89□□□□□ -0.67
CPM-201ENST00000338356 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
CPM-201ENST00000338356 G3V3G9 751 aa10.88□□□□□ -0.67
CPM-201ENST00000338356 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
CPM-201ENST00000338356 CCER2I3L3R5 266 aa10.88□□□□□ -0.67
CPM-201ENST00000338356 CC2D2AQ9P2K1 1620 aa10.88□□□□□ -0.67
CPM-201ENST00000338356 HDGFL2Q7Z4V5 671 aaPredicted RBP10.87□□□□□ -0.67
CPM-201ENST00000338356 MSH5O43196 834 aa10.87□□□□□ -0.67
CPM-201ENST00000338356 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPM-201ENST00000338356 SETD5Q9C0A6 1442 aa10.86□□□□□ -0.67
CPM-201ENST00000338356 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
CPM-201ENST00000338356 SRPK2P78362 688 aaKnown RBP10.86□□□□□ -0.67
CPM-201ENST00000338356 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
CPM-201ENST00000338356 ARHGAP35Q9NRY4 1499 aa10.85□□□□□ -0.67
CPM-201ENST00000338356 KIF3BO15066 747 aa10.85□□□□□ -0.67
CPM-201ENST00000338356 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
CPM-201ENST00000338356 IFT140Q96RY7 1462 aa10.85□□□□□ -0.67
CPM-201ENST00000338356 TOP2AP11388 1531 aaKnown RBP10.85□□□□□ -0.67
CPM-201ENST00000338356 WASHC2AQ641Q2 1341 aa10.84□□□□□ -0.67
CPM-201ENST00000338356 KCNJ4P48050 445 aa10.84□□□□□ -0.67
CPM-201ENST00000338356 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
CPM-201ENST00000338356 APBB1O00213 710 aa10.84□□□□□ -0.67
CPM-201ENST00000338356 FGD1P98174 961 aa10.83□□□□□ -0.68
CPM-201ENST00000338356 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
CPM-201ENST00000338356 GOLGA6L3A6NEY3 463 aa10.82□□□□□ -0.68
CPM-201ENST00000338356 MCCP23508 829 aa10.82□□□□□ -0.68
CPM-201ENST00000338356 MFAP1P55081 439 aaKnown RBP10.82□□□□□ -0.68
CPM-201ENST00000338356 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
CPM-201ENST00000338356 KTN1Q86UP2 1357 aaKnown RBP10.82□□□□□ -0.68
CPM-201ENST00000338356 TMF1P82094 1093 aa10.82□□□□□ -0.68
CPM-201ENST00000338356 GOLGA6L4A6NEF3 574 aa10.82□□□□□ -0.68
CPM-201ENST00000338356 RCAN3Q9UKA8 241 aa10.81□□□□□ -0.68
CPM-201ENST00000338356 MROH2BQ7Z745 1585 aa10.81□□□□□ -0.68
CPM-201ENST00000338356 SMARCA4P51532 1647 aa10.81□□□□□ -0.68
CPM-201ENST00000338356 CHMP4AQ9BY43 222 aa10.81□□□□□ -0.68
CPM-201ENST00000338356 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
CPM-201ENST00000338356 ITPRIPQ8IWB1 547 aa10.8□□□□□ -0.68
CPM-201ENST00000338356 CCDC18Q5T9S5 1454 aa10.8□□□□□ -0.68
CPM-201ENST00000338356 MS4A1P11836 297 aa10.8□□□□□ -0.68
CPM-201ENST00000338356 GBP4Q96PP9 640 aa10.8□□□□□ -0.68
CPM-201ENST00000338356 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
CPM-201ENST00000338356 STK26Q9P289 416 aa10.79□□□□□ -0.68
CPM-201ENST00000338356 ANKRD30AQ9BXX3 1397 aa10.79□□□□□ -0.68
CPM-201ENST00000338356 PTMSP20962 102 aa10.79□□□□□ -0.68
CPM-201ENST00000338356 ROCK2O75116 1388 aaKnown RBP10.78□□□□□ -0.68
CPM-201ENST00000338356 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
CPM-201ENST00000338356 NCAPD3P42695 1498 aa10.78□□□□□ -0.68
CPM-201ENST00000338356 RAB3GAP2Q9H2M9 1393 aa10.78□□□□□ -0.68
CPM-201ENST00000338356 CCDC146Q8IYE0 955 aa10.77□□□□□ -0.68
CPM-201ENST00000338356 TCERG1O14776 1098 aaKnown RBP10.77□□□□□ -0.69
CPM-201ENST00000338356 MORC1Q86VD1 984 aa10.77□□□□□ -0.69
CPM-201ENST00000338356 GRIN2BQ13224 1484 aa10.77□□□□□ -0.69
CPM-201ENST00000338356 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.69
CPM-201ENST00000338356 WIZO95785 1651 aa10.77□□□□□ -0.69
CPM-201ENST00000338356 SOX12O15370 315 aa10.77□□□□□ -0.69
CPM-201ENST00000338356 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
CPM-201ENST00000338356 SLC4A3P48751 1232 aa10.76□□□□□ -0.69
CPM-201ENST00000338356 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
CPM-201ENST00000338356 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
CPM-201ENST00000338356 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
CPM-201ENST00000338356 SAFB2Q14151 953 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPM-201ENST00000338356 RAPGEF2Q9Y4G8 1499 aa10.75□□□□□ -0.69
CPM-201ENST00000338356 PIP4K2BP78356 416 aa10.75□□□□□ -0.69
CPM-201ENST00000338356 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
CPM-201ENST00000338356 HSP90B1P14625 803 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms