RNA–Protein interactions for RNA: ENST00000337495.9

SCMH1-202, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 3,108 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-202ENST00000337495 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
SCMH1-202ENST00000337495 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.24
SCMH1-202ENST00000337495 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
SCMH1-202ENST00000337495 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
SCMH1-202ENST00000337495 TRIM52Q96A61 297 aa13.52□□□□□ -0.25
SCMH1-202ENST00000337495 GLI2P10070 1586 aa13.51□□□□□ -0.25
SCMH1-202ENST00000337495 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
SCMH1-202ENST00000337495 FMN1Q68DA7 1419 aa13.5□□□□□ -0.25
SCMH1-202ENST00000337495 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
SCMH1-202ENST00000337495 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
SCMH1-202ENST00000337495 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
SCMH1-202ENST00000337495 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
SCMH1-202ENST00000337495 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
SCMH1-202ENST00000337495 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
SCMH1-202ENST00000337495 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
SCMH1-202ENST00000337495 CFAP43Q8NDM7 1665 aa13.44□□□□□ -0.26
SCMH1-202ENST00000337495 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
SCMH1-202ENST00000337495 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
SCMH1-202ENST00000337495 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
SCMH1-202ENST00000337495 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
SCMH1-202ENST00000337495 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
SCMH1-202ENST00000337495 KDM6BO15054 1643 aa13.4□□□□□ -0.26
SCMH1-202ENST00000337495 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
SCMH1-202ENST00000337495 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
SCMH1-202ENST00000337495 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
SCMH1-202ENST00000337495 KIF14Q15058 1648 aa13.39□□□□□ -0.27
SCMH1-202ENST00000337495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.275e-6■■■■□ 19.7
SCMH1-202ENST00000337495 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
SCMH1-202ENST00000337495 PLEKHD1A6NEE1 506 aa13.37□□□□□ -0.27
SCMH1-202ENST00000337495 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
SCMH1-202ENST00000337495 RTL5Q5HYW3 569 aaPredicted RBP13.36□□□□□ -0.27
SCMH1-202ENST00000337495 NOP58Q9Y2X3 529 aaKnown RBP13.36□□□□□ -0.27
SCMH1-202ENST00000337495 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
SCMH1-202ENST00000337495 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
SCMH1-202ENST00000337495 PKNOX2Q96KN3 472 aa13.35□□□□□ -0.27
SCMH1-202ENST00000337495 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
SCMH1-202ENST00000337495 TROQ12816 1431 aaPredicted RBP13.33□□□□□ -0.28
SCMH1-202ENST00000337495 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
SCMH1-202ENST00000337495 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
SCMH1-202ENST00000337495 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
SCMH1-202ENST00000337495 FANCAO15360 1455 aa13.27□□□□□ -0.28
SCMH1-202ENST00000337495 CDC42BPBQ9Y5S2 1711 aa13.27□□□□□ -0.29
SCMH1-202ENST00000337495 FRMPD1Q5SYB0 1578 aa13.26□□□□□ -0.29
SCMH1-202ENST00000337495 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
SCMH1-202ENST00000337495 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
SCMH1-202ENST00000337495 NEO1Q92859 1461 aa13.25□□□□□ -0.29
SCMH1-202ENST00000337495 ARAP3Q8WWN8 1544 aa13.25□□□□□ -0.29
SCMH1-202ENST00000337495 PLCH2O75038 1416 aa13.25□□□□□ -0.29
SCMH1-202ENST00000337495 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
SCMH1-202ENST00000337495 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
SCMH1-202ENST00000337495 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
SCMH1-202ENST00000337495 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
SCMH1-202ENST00000337495 RICTORQ6R327 1708 aa13.23□□□□□ -0.29
SCMH1-202ENST00000337495 AKNAQ7Z591 1439 aa13.23□□□□□ -0.29
SCMH1-202ENST00000337495 CFAP74Q9C0B2 1584 aa13.23□□□□□ -0.29
SCMH1-202ENST00000337495 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
SCMH1-202ENST00000337495 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
SCMH1-202ENST00000337495 EHBP1L1Q8N3D4 1523 aa13.22□□□□□ -0.29
SCMH1-202ENST00000337495 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
SCMH1-202ENST00000337495 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
SCMH1-202ENST00000337495 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
SCMH1-202ENST00000337495 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
SCMH1-202ENST00000337495 CCNB3Q8WWL7 1395 aa13.2□□□□□ -0.3
SCMH1-202ENST00000337495 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
SCMH1-202ENST00000337495 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
SCMH1-202ENST00000337495 DENND4BO75064 1496 aaPredicted RBP13.17□□□□□ -0.3
SCMH1-202ENST00000337495 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
SCMH1-202ENST00000337495 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
SCMH1-202ENST00000337495 RRBP1Q9P2E9 1410 aaKnown RBP13.17□□□□□ -0.3
SCMH1-202ENST00000337495 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
SCMH1-202ENST00000337495 ARHGEF12Q9NZN5 1544 aa13.17□□□□□ -0.3
SCMH1-202ENST00000337495 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCMH1-202ENST00000337495 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
SCMH1-202ENST00000337495 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
SCMH1-202ENST00000337495 ABCC1P33527 1531 aa13.16□□□□□ -0.3
SCMH1-202ENST00000337495 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
SCMH1-202ENST00000337495 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
SCMH1-202ENST00000337495 NCOA2Q15596 1464 aa13.15□□□□□ -0.3
SCMH1-202ENST00000337495 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
SCMH1-202ENST00000337495 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
SCMH1-202ENST00000337495 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
SCMH1-202ENST00000337495 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
SCMH1-202ENST00000337495 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
SCMH1-202ENST00000337495 SIN3AQ96ST3 1273 aa13.14□□□□□ -0.31
SCMH1-202ENST00000337495 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
SCMH1-202ENST00000337495 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
SCMH1-202ENST00000337495 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
SCMH1-202ENST00000337495 ANP32CO43423 234 aa13.13□□□□□ -0.31
SCMH1-202ENST00000337495 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
SCMH1-202ENST00000337495 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
SCMH1-202ENST00000337495 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
SCMH1-202ENST00000337495 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
SCMH1-202ENST00000337495 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
SCMH1-202ENST00000337495 NEFMP07197 916 aa13.12□□□□□ -0.31
SCMH1-202ENST00000337495 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
SCMH1-202ENST00000337495 KDM5CP41229 1560 aa13.12□□□□□ -0.31
SCMH1-202ENST00000337495 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
SCMH1-202ENST00000337495 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
SCMH1-202ENST00000337495 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
SCMH1-202ENST00000337495 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms