RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 IGF1RP08069 1367 aa20.31■□□□□ 0.84
HDAC5-202ENST00000336057 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
HDAC5-202ENST00000336057 MORC1Q86VD1 984 aa20.29■□□□□ 0.84
HDAC5-202ENST00000336057 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
HDAC5-202ENST00000336057 CHMP4BQ9H444 224 aaKnown RBP20.27■□□□□ 0.84
HDAC5-202ENST00000336057 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
HDAC5-202ENST00000336057 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
HDAC5-202ENST00000336057 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
HDAC5-202ENST00000336057 NLRP13Q86W25 1043 aa20.25■□□□□ 0.83
HDAC5-202ENST00000336057 DEKP35659 375 aaKnown RBP20.25■□□□□ 0.83
HDAC5-202ENST00000336057 CASC1Q6TDU7 716 aa20.25■□□□□ 0.83
HDAC5-202ENST00000336057 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.835e-16■■■■■ 28.8
HDAC5-202ENST00000336057 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
HDAC5-202ENST00000336057 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-202ENST00000336057 NCLP19338 710 aaKnown RBP20.23■□□□□ 0.83
HDAC5-202ENST00000336057 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
HDAC5-202ENST00000336057 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
HDAC5-202ENST00000336057 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
HDAC5-202ENST00000336057 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
HDAC5-202ENST00000336057 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
HDAC5-202ENST00000336057 PHLDB1Q86UU1 1377 aa20.18■□□□□ 0.82
HDAC5-202ENST00000336057 KIF15Q9NS87 1388 aa20.18■□□□□ 0.82
HDAC5-202ENST00000336057 ST20-MTHFSA0A0A6YYL1 179 aa20.17■□□□□ 0.82
HDAC5-202ENST00000336057 FGD6Q6ZV73 1430 aa20.17■□□□□ 0.82
HDAC5-202ENST00000336057 LRRC9Q6ZRR7 1453 aa20.16■□□□□ 0.82
HDAC5-202ENST00000336057 GGT6Q6P531 493 aa20.16■□□□□ 0.82
HDAC5-202ENST00000336057 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
HDAC5-202ENST00000336057 RTN4Q9NQC3 1192 aaKnown RBP20.16■□□□□ 0.82
HDAC5-202ENST00000336057 ARID4BQ4LE39 1312 aaPredicted RBP20.16■□□□□ 0.82
HDAC5-202ENST00000336057 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
HDAC5-202ENST00000336057 SAFB2Q14151 953 aaKnown RBP eCLIP20.15■□□□□ 0.82
HDAC5-202ENST00000336057 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
HDAC5-202ENST00000336057 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
HDAC5-202ENST00000336057 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
HDAC5-202ENST00000336057 ERICH3Q5RHP9 1530 aa20.14■□□□□ 0.81
HDAC5-202ENST00000336057 IPO9Q96P70 1041 aaKnown RBP20.14■□□□□ 0.81
HDAC5-202ENST00000336057 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
HDAC5-202ENST00000336057 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
HDAC5-202ENST00000336057 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
HDAC5-202ENST00000336057 ARAP1Q96P48 1450 aa20.12■□□□□ 0.81
HDAC5-202ENST00000336057 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
HDAC5-202ENST00000336057 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
HDAC5-202ENST00000336057 MYOM3Q5VTT5 1437 aa20.11■□□□□ 0.81
HDAC5-202ENST00000336057 HSCBQ8IWL3 235 aa20.11■□□□□ 0.81
HDAC5-202ENST00000336057 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
HDAC5-202ENST00000336057 USP47Q96K76 1375 aa20.11■□□□□ 0.81
HDAC5-202ENST00000336057 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
HDAC5-202ENST00000336057 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
HDAC5-202ENST00000336057 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
HDAC5-202ENST00000336057 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.81
HDAC5-202ENST00000336057 KIF3BO15066 747 aa20.08■□□□□ 0.81
HDAC5-202ENST00000336057 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.8
HDAC5-202ENST00000336057 STK26Q9P289 416 aa20.08■□□□□ 0.8
HDAC5-202ENST00000336057 CUX1P39880 1505 aa20.07■□□□□ 0.8
HDAC5-202ENST00000336057 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
HDAC5-202ENST00000336057 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
HDAC5-202ENST00000336057 SPAG9O60271 1321 aaKnown RBP20.06■□□□□ 0.8
HDAC5-202ENST00000336057 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
HDAC5-202ENST00000336057 PANK3Q9H999 370 aa20.04■□□□□ 0.8
HDAC5-202ENST00000336057 CASKIN1Q8WXD9 1431 aa20.04■□□□□ 0.8
HDAC5-202ENST00000336057 PTMAP06454 111 aaKnown RBP20.04■□□□□ 0.8
HDAC5-202ENST00000336057 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
HDAC5-202ENST00000336057 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
HDAC5-202ENST00000336057 SPRYD3Q8NCJ5 442 aa20.01■□□□□ 0.79
HDAC5-202ENST00000336057 CCDC7Q96M83 1385 aa20.01■□□□□ 0.79
HDAC5-202ENST00000336057 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
HDAC5-202ENST00000336057 L1TD1Q5T7N2 865 aaKnown RBP20.01■□□□□ 0.79
HDAC5-202ENST00000336057 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
HDAC5-202ENST00000336057 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
HDAC5-202ENST00000336057 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
HDAC5-202ENST00000336057 RRP1P56182 461 aaKnown RBP19.99■□□□□ 0.79
HDAC5-202ENST00000336057 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
HDAC5-202ENST00000336057 NCOA2Q15596 1464 aa19.98■□□□□ 0.79
HDAC5-202ENST00000336057 KIF7Q2M1P5 1343 aa19.98■□□□□ 0.79
HDAC5-202ENST00000336057 NAP1L5Q96NT1 182 aaPredicted RBP19.98■□□□□ 0.79
HDAC5-202ENST00000336057 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
HDAC5-202ENST00000336057 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
HDAC5-202ENST00000336057 MLECQ14165 292 aa19.97■□□□□ 0.79
HDAC5-202ENST00000336057 CNTLNQ9NXG0 1405 aa19.96■□□□□ 0.79
HDAC5-202ENST00000336057 ZNF644Q9H582 1327 aaPredicted RBP19.96■□□□□ 0.79
HDAC5-202ENST00000336057 TPRNQ4KMQ1 711 aa19.96■□□□□ 0.79
HDAC5-202ENST00000336057 EXOC6Q8TAG9 804 aa19.96■□□□□ 0.79
HDAC5-202ENST00000336057 FYCO1Q9BQS8 1478 aa19.96■□□□□ 0.79
HDAC5-202ENST00000336057 SLKQ9H2G2 1235 aaPredicted RBP19.96■□□□□ 0.79
HDAC5-202ENST00000336057 CFTRP13569 1480 aa19.95■□□□□ 0.78
HDAC5-202ENST00000336057 FANCIQ9NVI1 1328 aa19.95■□□□□ 0.78
HDAC5-202ENST00000336057 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
HDAC5-202ENST00000336057 SOX12O15370 315 aa19.95■□□□□ 0.78
HDAC5-202ENST00000336057 OS9Q13438 667 aaPredicted RBP19.94■□□□□ 0.78
HDAC5-202ENST00000336057 WASHC2AQ641Q2 1341 aa19.94■□□□□ 0.78
HDAC5-202ENST00000336057 SMC4Q9NTJ3 1288 aa19.94■□□□□ 0.78
HDAC5-202ENST00000336057 PTPRGP23470 1445 aa19.93■□□□□ 0.78
HDAC5-202ENST00000336057 PDE4AP27815 886 aa19.93■□□□□ 0.78
HDAC5-202ENST00000336057 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
HDAC5-202ENST00000336057 PLIN1O60240 522 aa19.92■□□□□ 0.78
HDAC5-202ENST00000336057 DNTTIP2Q5QJE6 756 aaKnown RBP19.92■□□□□ 0.78
HDAC5-202ENST00000336057 TERF2IPQ9NYB0 399 aa19.92■□□□□ 0.78
HDAC5-202ENST00000336057 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
HDAC5-202ENST00000336057 CENPQQ7L2Z9 268 aaPredicted RBP19.91■□□□□ 0.78
HDAC5-202ENST00000336057 A0A0G2JS52 829 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms