RNA–Protein interactions for RNA: ENST00000335681.9

NPAS2-201, Transcript of neuronal PAS domain protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS2, Length 4,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-201ENST00000335681 WASHC2AQ641Q2 1341 aa20.52■□□□□ 0.88
NPAS2-201ENST00000335681 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.88
NPAS2-201ENST00000335681 RCAN3Q9UKA8 241 aa20.52■□□□□ 0.88
NPAS2-201ENST00000335681 PKD2Q13563 968 aa20.52■□□□□ 0.88
NPAS2-201ENST00000335681 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
NPAS2-201ENST00000335681 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
NPAS2-201ENST00000335681 SKAP1Q86WV1 359 aa20.5■□□□□ 0.87
NPAS2-201ENST00000335681 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
NPAS2-201ENST00000335681 SLKQ9H2G2 1235 aaPredicted RBP20.49■□□□□ 0.87
NPAS2-201ENST00000335681 MLECQ14165 292 aa20.49■□□□□ 0.87
NPAS2-201ENST00000335681 HSP90AA1P07900 732 aaKnown RBP20.48■□□□□ 0.87
NPAS2-201ENST00000335681 PDE4AP27815 886 aa20.48■□□□□ 0.87
NPAS2-201ENST00000335681 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
NPAS2-201ENST00000335681 GLIPR1L2Q4G1C9 344 aa20.47■□□□□ 0.87
NPAS2-201ENST00000335681 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.47■□□□□ 0.87
NPAS2-201ENST00000335681 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
NPAS2-201ENST00000335681 ZNF644Q9H582 1327 aaPredicted RBP20.46■□□□□ 0.87
NPAS2-201ENST00000335681 GZF1Q9H116 711 aaPredicted RBP20.46■□□□□ 0.87
NPAS2-201ENST00000335681 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
NPAS2-201ENST00000335681 GGT6Q6P531 493 aa20.44■□□□□ 0.86
NPAS2-201ENST00000335681 ZBED9Q6R2W3 1325 aa20.44■□□□□ 0.86
NPAS2-201ENST00000335681 AKNAQ7Z591 1439 aa20.42■□□□□ 0.86
NPAS2-201ENST00000335681 FRAT1Q92837 279 aaPredicted RBP20.42■□□□□ 0.86
NPAS2-201ENST00000335681 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
NPAS2-201ENST00000335681 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
NPAS2-201ENST00000335681 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
NPAS2-201ENST00000335681 CFTRP13569 1480 aa20.4■□□□□ 0.86
NPAS2-201ENST00000335681 SAFB2Q14151 953 aaKnown RBP eCLIP20.38■□□□□ 0.85
NPAS2-201ENST00000335681 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
NPAS2-201ENST00000335681 ARID3AQ99856 593 aa20.37■□□□□ 0.85
NPAS2-201ENST00000335681 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
NPAS2-201ENST00000335681 GSE1Q14687 1217 aa20.36■□□□□ 0.85
NPAS2-201ENST00000335681 NUP155O75694 1391 aa20.35■□□□□ 0.85
NPAS2-201ENST00000335681 CUX1P39880 1505 aa20.33■□□□□ 0.85
NPAS2-201ENST00000335681 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
NPAS2-201ENST00000335681 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
NPAS2-201ENST00000335681 BECN1Q14457 450 aa20.32■□□□□ 0.84
NPAS2-201ENST00000335681 KIF7Q2M1P5 1343 aa20.31■□□□□ 0.84
NPAS2-201ENST00000335681 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
NPAS2-201ENST00000335681 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
NPAS2-201ENST00000335681 ST20-MTHFSA0A0A6YYL1 179 aa20.3■□□□□ 0.84
NPAS2-201ENST00000335681 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
NPAS2-201ENST00000335681 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
NPAS2-201ENST00000335681 CCDC18Q5T9S5 1454 aa20.28■□□□□ 0.84
NPAS2-201ENST00000335681 VSIG10Q8N0Z9 540 aa20.28■□□□□ 0.84
NPAS2-201ENST00000335681 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
NPAS2-201ENST00000335681 CDCA7LQ96GN5 454 aa20.27■□□□□ 0.84
NPAS2-201ENST00000335681 ZBTB7CA1YPR0 619 aa20.26■□□□□ 0.83
NPAS2-201ENST00000335681 KIF3BO15066 747 aa20.26■□□□□ 0.83
NPAS2-201ENST00000335681 CCDC7Q96M83 1385 aa20.25■□□□□ 0.83
NPAS2-201ENST00000335681 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
NPAS2-201ENST00000335681 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
NPAS2-201ENST00000335681 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
NPAS2-201ENST00000335681 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
NPAS2-201ENST00000335681 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
NPAS2-201ENST00000335681 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
NPAS2-201ENST00000335681 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
NPAS2-201ENST00000335681 STK26Q9P289 416 aa20.21■□□□□ 0.83
NPAS2-201ENST00000335681 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
NPAS2-201ENST00000335681 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
NPAS2-201ENST00000335681 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
NPAS2-201ENST00000335681 PTPRGP23470 1445 aa20.2■□□□□ 0.82
NPAS2-201ENST00000335681 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
NPAS2-201ENST00000335681 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
NPAS2-201ENST00000335681 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
NPAS2-201ENST00000335681 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
NPAS2-201ENST00000335681 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
NPAS2-201ENST00000335681 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
NPAS2-201ENST00000335681 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
NPAS2-201ENST00000335681 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
NPAS2-201ENST00000335681 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
NPAS2-201ENST00000335681 CNTLNQ9NXG0 1405 aa20.15■□□□□ 0.82
NPAS2-201ENST00000335681 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.82
NPAS2-201ENST00000335681 NLRP13Q86W25 1043 aa20.14■□□□□ 0.82
NPAS2-201ENST00000335681 SOX12O15370 315 aa20.14■□□□□ 0.81
NPAS2-201ENST00000335681 KTN1Q86UP2 1357 aaKnown RBP20.14■□□□□ 0.81
NPAS2-201ENST00000335681 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
NPAS2-201ENST00000335681 RALBP1Q15311 655 aa20.12■□□□□ 0.81
NPAS2-201ENST00000335681 POGKQ9P215 609 aa20.12■□□□□ 0.81
NPAS2-201ENST00000335681 USP47Q96K76 1375 aa20.11■□□□□ 0.81
NPAS2-201ENST00000335681 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
NPAS2-201ENST00000335681 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
NPAS2-201ENST00000335681 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
NPAS2-201ENST00000335681 UACAQ9BZF9 1416 aa20.09■□□□□ 0.81
NPAS2-201ENST00000335681 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
NPAS2-201ENST00000335681 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.81
NPAS2-201ENST00000335681 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.8
NPAS2-201ENST00000335681 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.8
NPAS2-201ENST00000335681 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
NPAS2-201ENST00000335681 PANK3Q9H999 370 aa20.07■□□□□ 0.8
NPAS2-201ENST00000335681 TMF1P82094 1093 aa20.06■□□□□ 0.8
NPAS2-201ENST00000335681 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
NPAS2-201ENST00000335681 FAM161AQ3B820 660 aa20.05■□□□□ 0.8
NPAS2-201ENST00000335681 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
NPAS2-201ENST00000335681 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
NPAS2-201ENST00000335681 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
NPAS2-201ENST00000335681 HSP90AA2PQ14568 343 aaPredicted RBP20.03■□□□□ 0.8
NPAS2-201ENST00000335681 RRP7AQ9Y3A4 280 aaKnown RBP20.03■□□□□ 0.8
NPAS2-201ENST00000335681 MFAP1P55081 439 aaKnown RBP20.02■□□□□ 0.8
NPAS2-201ENST00000335681 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms