RNA–Protein interactions for RNA: ENST00000335464.9

TMEM104-201, Transcript of transmembrane protein 104, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM104, Length 4,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-201ENST00000335464 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
TMEM104-201ENST00000335464 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
TMEM104-201ENST00000335464 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
TMEM104-201ENST00000335464 BECN1Q14457 450 aa18.56■□□□□ 0.56
TMEM104-201ENST00000335464 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
TMEM104-201ENST00000335464 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
TMEM104-201ENST00000335464 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
TMEM104-201ENST00000335464 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
TMEM104-201ENST00000335464 NUP155O75694 1391 aa18.54■□□□□ 0.56
TMEM104-201ENST00000335464 HFM1A2PYH4 1435 aa18.53■□□□□ 0.56
TMEM104-201ENST00000335464 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
TMEM104-201ENST00000335464 TMF1P82094 1093 aa18.52■□□□□ 0.56
TMEM104-201ENST00000335464 USP47Q96K76 1375 aa18.52■□□□□ 0.56
TMEM104-201ENST00000335464 ANKRD30AQ9BXX3 1397 aa18.52■□□□□ 0.56
TMEM104-201ENST00000335464 MAPKBP1O60336 1514 aa18.52■□□□□ 0.55
TMEM104-201ENST00000335464 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
TMEM104-201ENST00000335464 HSP90AA1P07900 732 aaKnown RBP18.51■□□□□ 0.55
TMEM104-201ENST00000335464 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
TMEM104-201ENST00000335464 MSH5O43196 834 aa18.49■□□□□ 0.55
TMEM104-201ENST00000335464 CCDC184Q52MB2 194 aa18.49■□□□□ 0.55
TMEM104-201ENST00000335464 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
TMEM104-201ENST00000335464 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
TMEM104-201ENST00000335464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.49■□□□□ 0.55
TMEM104-201ENST00000335464 MYBBP1AQ9BQG0 1328 aaKnown RBP18.49■□□□□ 0.55
TMEM104-201ENST00000335464 EXOC6Q8TAG9 804 aa18.48■□□□□ 0.55
TMEM104-201ENST00000335464 EFCAB5A4FU69 1503 aa18.48■□□□□ 0.55
TMEM104-201ENST00000335464 RRP1P56182 461 aaKnown RBP18.48■□□□□ 0.55
TMEM104-201ENST00000335464 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
TMEM104-201ENST00000335464 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
TMEM104-201ENST00000335464 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
TMEM104-201ENST00000335464 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
TMEM104-201ENST00000335464 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
TMEM104-201ENST00000335464 PDE4AP27815 886 aa18.46■□□□□ 0.55
TMEM104-201ENST00000335464 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
TMEM104-201ENST00000335464 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
TMEM104-201ENST00000335464 NAIPQ13075 1403 aa18.42■□□□□ 0.54
TMEM104-201ENST00000335464 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
TMEM104-201ENST00000335464 ANP32BQ92688 251 aaKnown RBP18.41■□□□□ 0.54
TMEM104-201ENST00000335464 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
TMEM104-201ENST00000335464 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
TMEM104-201ENST00000335464 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
TMEM104-201ENST00000335464 PLIN1O60240 522 aa18.39■□□□□ 0.53
TMEM104-201ENST00000335464 AKNAQ7Z591 1439 aa18.39■□□□□ 0.53
TMEM104-201ENST00000335464 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
TMEM104-201ENST00000335464 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
TMEM104-201ENST00000335464 EHBP1L1Q8N3D4 1523 aa18.36■□□□□ 0.53
TMEM104-201ENST00000335464 GLIPR1L2Q4G1C9 344 aa18.35■□□□□ 0.53
TMEM104-201ENST00000335464 ARID4BQ4LE39 1312 aaPredicted RBP18.34■□□□□ 0.53
TMEM104-201ENST00000335464 MS4A1P11836 297 aa18.34■□□□□ 0.53
TMEM104-201ENST00000335464 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
TMEM104-201ENST00000335464 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.53
TMEM104-201ENST00000335464 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
TMEM104-201ENST00000335464 CARMIL2Q6F5E8 1435 aa18.33■□□□□ 0.52
TMEM104-201ENST00000335464 TNNT2P45379 298 aaPredicted RBP18.32■□□□□ 0.52
TMEM104-201ENST00000335464 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
TMEM104-201ENST00000335464 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
TMEM104-201ENST00000335464 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
TMEM104-201ENST00000335464 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
TMEM104-201ENST00000335464 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.529e-7■■■■■ 32.1
TMEM104-201ENST00000335464 PANK3Q9H999 370 aa18.3■□□□□ 0.52
TMEM104-201ENST00000335464 SLC4A3P48751 1232 aa18.3■□□□□ 0.52
TMEM104-201ENST00000335464 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
TMEM104-201ENST00000335464 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
TMEM104-201ENST00000335464 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
TMEM104-201ENST00000335464 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.52
TMEM104-201ENST00000335464 CENPQQ7L2Z9 268 aaPredicted RBP18.27■□□□□ 0.51
TMEM104-201ENST00000335464 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
TMEM104-201ENST00000335464 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
TMEM104-201ENST00000335464 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
TMEM104-201ENST00000335464 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
TMEM104-201ENST00000335464 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
TMEM104-201ENST00000335464 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
TMEM104-201ENST00000335464 TRIM44Q96DX7 344 aaPredicted RBP18.25■□□□□ 0.51
TMEM104-201ENST00000335464 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
TMEM104-201ENST00000335464 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
TMEM104-201ENST00000335464 GSE1Q14687 1217 aa18.24■□□□□ 0.51
TMEM104-201ENST00000335464 L1TD1Q5T7N2 865 aaKnown RBP18.22■□□□□ 0.51
TMEM104-201ENST00000335464 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
TMEM104-201ENST00000335464 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
TMEM104-201ENST00000335464 SLC24A1O60721 1099 aa18.21■□□□□ 0.51
TMEM104-201ENST00000335464 NCOA1Q15788 1441 aa18.21■□□□□ 0.51
TMEM104-201ENST00000335464 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
TMEM104-201ENST00000335464 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
TMEM104-201ENST00000335464 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
TMEM104-201ENST00000335464 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
TMEM104-201ENST00000335464 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
TMEM104-201ENST00000335464 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
TMEM104-201ENST00000335464 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
TMEM104-201ENST00000335464 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
TMEM104-201ENST00000335464 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
TMEM104-201ENST00000335464 NESP48681 1621 aa18.19■□□□□ 0.5
TMEM104-201ENST00000335464 DAPK1P53355 1430 aa18.18■□□□□ 0.5
TMEM104-201ENST00000335464 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 GOLGA6L22H0YM25 854 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 JPH4Q96JJ6 628 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
TMEM104-201ENST00000335464 HECW1Q76N89 1606 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms