RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
LRCH3-201ENST00000334859 PLB1Q6P1J6 1458 aa25.02■■□□□ 1.6
LRCH3-201ENST00000334859 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
LRCH3-201ENST00000334859 ANP32CO43423 234 aa25.01■■□□□ 1.59
LRCH3-201ENST00000334859 TROQ12816 1431 aaPredicted RBP25■■□□□ 1.59
LRCH3-201ENST00000334859 CARMIL2Q6F5E8 1435 aa24.98■■□□□ 1.59
LRCH3-201ENST00000334859 FOXD1Q16676 465 aa24.96■■□□□ 1.59
LRCH3-201ENST00000334859 SUPT16HQ9Y5B9 1047 aaKnown RBP24.96■■□□□ 1.59
LRCH3-201ENST00000334859 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
LRCH3-201ENST00000334859 NUP160Q12769 1436 aa24.95■■□□□ 1.58
LRCH3-201ENST00000334859 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
LRCH3-201ENST00000334859 KIF14Q15058 1648 aa24.93■■□□□ 1.58
LRCH3-201ENST00000334859 CCER2I3L3R5 266 aa24.92■■□□□ 1.58
LRCH3-201ENST00000334859 CFDP1Q9UEE9 299 aaPredicted RBP24.92■■□□□ 1.58
LRCH3-201ENST00000334859 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
LRCH3-201ENST00000334859 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
LRCH3-201ENST00000334859 GPATCH8Q9UKJ3 1502 aaKnown RBP24.88■■□□□ 1.57
LRCH3-201ENST00000334859 L3MBTL2Q969R5 705 aa24.88■■□□□ 1.57
LRCH3-201ENST00000334859 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
LRCH3-201ENST00000334859 ZNF777Q9ULD5 760 aaPredicted RBP24.87■■□□□ 1.57
LRCH3-201ENST00000334859 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
LRCH3-201ENST00000334859 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
LRCH3-201ENST00000334859 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
LRCH3-201ENST00000334859 RPRD2Q5VT52 1461 aaKnown RBP24.84■■□□□ 1.57
LRCH3-201ENST00000334859 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.57
LRCH3-201ENST00000334859 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
LRCH3-201ENST00000334859 WASHC2AQ641Q2 1341 aa24.8■■□□□ 1.56
LRCH3-201ENST00000334859 NCOA1Q15788 1441 aa24.8■■□□□ 1.56
LRCH3-201ENST00000334859 ABCA8O94911 1581 aa24.79■■□□□ 1.56
LRCH3-201ENST00000334859 TEX14Q8IWB6 1497 aa24.79■■□□□ 1.56
LRCH3-201ENST00000334859 PZPP20742 1482 aa24.77■■□□□ 1.56
LRCH3-201ENST00000334859 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
LRCH3-201ENST00000334859 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
LRCH3-201ENST00000334859 CDC42BPAQ5VT25 1732 aa24.75■■□□□ 1.55
LRCH3-201ENST00000334859 ANKRD30AQ9BXX3 1397 aa24.74■■□□□ 1.55
LRCH3-201ENST00000334859 ATP10BO94823 1461 aa24.73■■□□□ 1.55
LRCH3-201ENST00000334859 NBPF8Q3BBV2 869 aa24.71■■□□□ 1.55
LRCH3-201ENST00000334859 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
LRCH3-201ENST00000334859 CNTLNQ9NXG0 1405 aa24.68■■□□□ 1.54
LRCH3-201ENST00000334859 ANKRD50Q9ULJ7 1429 aa24.67■■□□□ 1.54
LRCH3-201ENST00000334859 KIAA1107Q9UPP5 1409 aa24.67■■□□□ 1.54
LRCH3-201ENST00000334859 C9orf84Q5VXU9 1444 aa24.65■■□□□ 1.54
LRCH3-201ENST00000334859 CCDC7Q96M83 1385 aa24.65■■□□□ 1.54
LRCH3-201ENST00000334859 SHANK2Q9UPX8 1470 aa24.64■■□□□ 1.54
LRCH3-201ENST00000334859 FKBP8Q14318 412 aa24.64■■□□□ 1.54
LRCH3-201ENST00000334859 PTPRGP23470 1445 aa24.64■■□□□ 1.53
LRCH3-201ENST00000334859 PKD2Q13563 968 aa24.63■■□□□ 1.53
LRCH3-201ENST00000334859 C11orf95C9JLR9 678 aaPredicted RBP24.63■■□□□ 1.53
LRCH3-201ENST00000334859 BCANQ96GW7 911 aa24.62■■□□□ 1.53
LRCH3-201ENST00000334859 NEFLP07196 543 aa24.6■■□□□ 1.53
LRCH3-201ENST00000334859 CHD1O14646 1710 aa24.58■■□□□ 1.53
LRCH3-201ENST00000334859 TSPY4P0CV99 314 aa24.58■■□□□ 1.52
LRCH3-201ENST00000334859 TSPY10P0CW01 314 aa24.58■■□□□ 1.52
LRCH3-201ENST00000334859 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
LRCH3-201ENST00000334859 SPATA31E1Q6ZUB1 1445 aa24.57■■□□□ 1.52
LRCH3-201ENST00000334859 HNRNPUQ00839 825 aaKnown RBP eCLIP24.57■■□□□ 1.52
LRCH3-201ENST00000334859 NUP155O75694 1391 aa24.57■■□□□ 1.52
LRCH3-201ENST00000334859 ZNF326Q5BKZ1 582 aaKnown RBP24.56■■□□□ 1.52
LRCH3-201ENST00000334859 POLR1AO95602 1720 aaPredicted RBP24.55■■□□□ 1.52
LRCH3-201ENST00000334859 HNRNPMP52272 730 aaKnown RBP eCLIP24.54■■□□□ 1.52
LRCH3-201ENST00000334859 KIF7Q2M1P5 1343 aa24.54■■□□□ 1.52
LRCH3-201ENST00000334859 KIF15Q9NS87 1388 aa24.53■■□□□ 1.52
LRCH3-201ENST00000334859 ARHGEF5Q12774 1597 aa24.53■■□□□ 1.52
LRCH3-201ENST00000334859 PREX2Q70Z35 1606 aa24.51■■□□□ 1.51
LRCH3-201ENST00000334859 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
LRCH3-201ENST00000334859 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
LRCH3-201ENST00000334859 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
LRCH3-201ENST00000334859 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
LRCH3-201ENST00000334859 CCDC141Q6ZP82 1450 aa24.48■■□□□ 1.51
LRCH3-201ENST00000334859 USP47Q96K76 1375 aa24.48■■□□□ 1.51
LRCH3-201ENST00000334859 CCDC184Q52MB2 194 aa24.46■■□□□ 1.51
LRCH3-201ENST00000334859 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
LRCH3-201ENST00000334859 TSHZ2Q9NRE2 1034 aa24.42■■□□□ 1.5
LRCH3-201ENST00000334859 TTC37Q6PGP7 1564 aa24.42■■□□□ 1.5
LRCH3-201ENST00000334859 MRS2Q9HD23 443 aa24.42■■□□□ 1.5
LRCH3-201ENST00000334859 ARHGAP5Q13017 1502 aa24.41■■□□□ 1.5
LRCH3-201ENST00000334859 SYCP2Q9BX26 1530 aa24.41■■□□□ 1.5
LRCH3-201ENST00000334859 ARHGEF12Q9NZN5 1544 aa24.41■■□□□ 1.5
LRCH3-201ENST00000334859 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
LRCH3-201ENST00000334859 KDM5CP41229 1560 aa24.4■■□□□ 1.5
LRCH3-201ENST00000334859 BCORL1Q5H9F3 1711 aa24.39■■□□□ 1.5
LRCH3-201ENST00000334859 RALGAPBQ86X10 1494 aa24.39■■□□□ 1.49
LRCH3-201ENST00000334859 UHRF1BP1Q6BDS2 1440 aa24.39■■□□□ 1.49
LRCH3-201ENST00000334859 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
LRCH3-201ENST00000334859 ERCC6L2Q5T890 1561 aa24.38■■□□□ 1.49
LRCH3-201ENST00000334859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.37■■□□□ 1.491e-6■■■■□ 23.9
LRCH3-201ENST00000334859 FAM135AQ9P2D6 1515 aa24.37■■□□□ 1.49
LRCH3-201ENST00000334859 RSPH4AQ5TD94 716 aa24.36■■□□□ 1.49
LRCH3-201ENST00000334859 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
LRCH3-201ENST00000334859 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
LRCH3-201ENST00000334859 CARD11Q9BXL7 1154 aa24.33■■□□□ 1.49
LRCH3-201ENST00000334859 MYO5CQ9NQX4 1742 aa24.33■■□□□ 1.49
LRCH3-201ENST00000334859 CNGB1Q14028 1251 aaPredicted RBP24.31■■□□□ 1.48
LRCH3-201ENST00000334859 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
LRCH3-201ENST00000334859 DHX29Q7Z478 1369 aaKnown RBP24.3■■□□□ 1.48
LRCH3-201ENST00000334859 MAST1Q9Y2H9 1570 aa24.3■■□□□ 1.48
LRCH3-201ENST00000334859 ARID4BQ4LE39 1312 aaPredicted RBP24.28■■□□□ 1.48
LRCH3-201ENST00000334859 UNC13BO14795 1591 aa24.27■■□□□ 1.48
LRCH3-201ENST00000334859 CCDC144AA2RUR9 1427 aa24.27■■□□□ 1.47
LRCH3-201ENST00000334859 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms