RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
NELFA-201ENST00000333877 ZNF316A6NFI3 1004 aaPredicted RBP27.13■■□□□ 1.93
NELFA-201ENST00000333877 ZNF777Q9ULD5 760 aaPredicted RBP27.11■■□□□ 1.93
NELFA-201ENST00000333877 ROCK1Q13464 1354 aa27.08■■□□□ 1.93
NELFA-201ENST00000333877 KDM6BO15054 1643 aa27.05■■□□□ 1.92
NELFA-201ENST00000333877 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
NELFA-201ENST00000333877 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
NELFA-201ENST00000333877 NEUROD1Q13562 356 aa27.01■■□□□ 1.91
NELFA-201ENST00000333877 CROCC2H7BZ55 1655 aa26.99■■□□□ 1.91
NELFA-201ENST00000333877 ZCCHC11Q5TAX3 1644 aaKnown RBP26.99■■□□□ 1.91
NELFA-201ENST00000333877 DIEXFQ68CQ4 756 aaKnown RBP26.98■■□□□ 1.91
NELFA-201ENST00000333877 TRIM52Q96A61 297 aa26.97■■□□□ 1.91
NELFA-201ENST00000333877 ADGBQ8N7X0 1667 aa26.97■■□□□ 1.91
NELFA-201ENST00000333877 KDM5BQ9UGL1 1544 aa26.96■■□□□ 1.91
NELFA-201ENST00000333877 OSCARQ8IYS5 282 aa26.96■■□□□ 1.91
NELFA-201ENST00000333877 PREX2Q70Z35 1606 aa26.95■■□□□ 1.91
NELFA-201ENST00000333877 CDC42BPBQ9Y5S2 1711 aa26.95■■□□□ 1.9
NELFA-201ENST00000333877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.94■■□□□ 1.92e-7■■■■□ 26.2
NELFA-201ENST00000333877 TTC37Q6PGP7 1564 aa26.94■■□□□ 1.9
NELFA-201ENST00000333877 NCOA1Q15788 1441 aa26.92■■□□□ 1.9
NELFA-201ENST00000333877 ADGRL2O95490 1459 aa26.92■■□□□ 1.9
NELFA-201ENST00000333877 TIMELESSQ9UNS1 1208 aa26.91■■□□□ 1.9
NELFA-201ENST00000333877 KCNH8Q96L42 1107 aa26.9■■□□□ 1.9
NELFA-201ENST00000333877 ACIN1Q9UKV3 1341 aaKnown RBP26.89■■□□□ 1.89
NELFA-201ENST00000333877 SAMD9LQ8IVG5 1584 aa26.88■■□□□ 1.89
NELFA-201ENST00000333877 ANKRD30AQ9BXX3 1397 aa26.88■■□□□ 1.89
NELFA-201ENST00000333877 DENND4BO75064 1496 aaPredicted RBP26.87■■□□□ 1.89
NELFA-201ENST00000333877 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
NELFA-201ENST00000333877 HNRNPMP52272 730 aaKnown RBP eCLIP26.86■■□□□ 1.896e-7■■■■□ 23.8
NELFA-201ENST00000333877 ARHGEF5Q12774 1597 aa26.86■■□□□ 1.89
NELFA-201ENST00000333877 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
NELFA-201ENST00000333877 MPHOSPH9Q99550 1183 aa26.85■■□□□ 1.89
NELFA-201ENST00000333877 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
NELFA-201ENST00000333877 C9orf84Q5VXU9 1444 aa26.85■■□□□ 1.89
NELFA-201ENST00000333877 MBD5Q9P267 1494 aa26.84■■□□□ 1.89
NELFA-201ENST00000333877 TSPY4P0CV99 314 aa26.83■■□□□ 1.89
NELFA-201ENST00000333877 TSPY10P0CW01 314 aa26.83■■□□□ 1.89
NELFA-201ENST00000333877 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
NELFA-201ENST00000333877 CCDC141Q6ZP82 1450 aa26.78■■□□□ 1.88
NELFA-201ENST00000333877 RSPH4AQ5TD94 716 aa26.77■■□□□ 1.88
NELFA-201ENST00000333877 SYCP2Q9BX26 1530 aa26.76■■□□□ 1.87
NELFA-201ENST00000333877 PPP1R15AO75807 674 aaPredicted RBP26.76■■□□□ 1.87
NELFA-201ENST00000333877 ANKRD50Q9ULJ7 1429 aa26.75■■□□□ 1.87
NELFA-201ENST00000333877 PLCH2O75038 1416 aa26.75■■□□□ 1.87
NELFA-201ENST00000333877 FOXD1Q16676 465 aa26.72■■□□□ 1.87
NELFA-201ENST00000333877 SLC4A1APQ9BWU0 796 aaKnown RBP26.72■■□□□ 1.87
NELFA-201ENST00000333877 PLEKHH2Q8IVE3 1493 aa26.72■■□□□ 1.87
NELFA-201ENST00000333877 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
NELFA-201ENST00000333877 KIAA1107Q9UPP5 1409 aa26.7■■□□□ 1.87
NELFA-201ENST00000333877 KIF15Q9NS87 1388 aa26.7■■□□□ 1.86
NELFA-201ENST00000333877 PZPP20742 1482 aa26.69■■□□□ 1.86
NELFA-201ENST00000333877 EFCAB2Q5VUJ9 269 aa26.68■■□□□ 1.86
NELFA-201ENST00000333877 ANKRD30BQ9BXX2 1392 aa26.65■■□□□ 1.86
NELFA-201ENST00000333877 MAST1Q9Y2H9 1570 aa26.65■■□□□ 1.86
NELFA-201ENST00000333877 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.86
NELFA-201ENST00000333877 ASXL2Q76L83 1435 aa26.63■■□□□ 1.85
NELFA-201ENST00000333877 ARAP3Q8WWN8 1544 aa26.61■■□□□ 1.85
NELFA-201ENST00000333877 ABCC1P33527 1531 aa26.6■■□□□ 1.85
NELFA-201ENST00000333877 NPM1P06748 294 aaKnown RBP eCLIP26.59■■□□□ 1.85
NELFA-201ENST00000333877 ABCA9Q8IUA7 1624 aa26.59■■□□□ 1.85
NELFA-201ENST00000333877 NUP155O75694 1391 aa26.58■■□□□ 1.85
NELFA-201ENST00000333877 RPRD2Q5VT52 1461 aaKnown RBP26.56■■□□□ 1.84
NELFA-201ENST00000333877 PLXNC1O60486 1568 aa26.55■■□□□ 1.84
NELFA-201ENST00000333877 PKD2Q13563 968 aa26.55■■□□□ 1.84
NELFA-201ENST00000333877 KDM5DQ9BY66 1539 aa26.55■■□□□ 1.84
NELFA-201ENST00000333877 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
NELFA-201ENST00000333877 MIER1Q8N108 512 aa26.51■■□□□ 1.84
NELFA-201ENST00000333877 L3MBTL2Q969R5 705 aa26.5■■□□□ 1.83
NELFA-201ENST00000333877 FANCAO15360 1455 aa26.5■■□□□ 1.83
NELFA-201ENST00000333877 DUOX2Q9NRD8 1548 aa26.47■■□□□ 1.83
NELFA-201ENST00000333877 TEX14Q8IWB6 1497 aa26.44■■□□□ 1.82
NELFA-201ENST00000333877 AFAP1Q8N556 730 aa26.44■■□□□ 1.82
NELFA-201ENST00000333877 UNC13BO14795 1591 aa26.43■■□□□ 1.82
NELFA-201ENST00000333877 SPAG9O60271 1321 aaKnown RBP26.43■■□□□ 1.82
NELFA-201ENST00000333877 FAM135AQ9P2D6 1515 aa26.43■■□□□ 1.82
NELFA-201ENST00000333877 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
NELFA-201ENST00000333877 ERBINQ96RT1 1412 aa26.4■■□□□ 1.82
NELFA-201ENST00000333877 ADGRL1O94910 1474 aa26.4■■□□□ 1.82
NELFA-201ENST00000333877 RTEL1-TNFRSF6BF6WH68 1400 aa26.4■■□□□ 1.82
NELFA-201ENST00000333877 ZFYVE16Q7Z3T8 1539 aa26.38■■□□□ 1.81
NELFA-201ENST00000333877 SCAPERQ9BY12 1400 aa26.37■■□□□ 1.81
NELFA-201ENST00000333877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.37■■□□□ 1.812e-6■■■■□ 20.4
NELFA-201ENST00000333877 CD109Q6YHK3 1445 aa26.34■■□□□ 1.81
NELFA-201ENST00000333877 IQGAP3Q86VI3 1631 aa26.33■■□□□ 1.81
NELFA-201ENST00000333877 INO80Q9ULG1 1556 aaPredicted RBP26.32■■□□□ 1.8
NELFA-201ENST00000333877 CYB5RLQ6IPT4 315 aa26.32■■□□□ 1.8
NELFA-201ENST00000333877 ATP7AQ04656 1500 aa26.32■■□□□ 1.8
NELFA-201ENST00000333877 NBPF8Q3BBV2 869 aa26.31■■□□□ 1.8
NELFA-201ENST00000333877 MAGI2Q86UL8 1455 aa26.31■■□□□ 1.8
NELFA-201ENST00000333877 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
NELFA-201ENST00000333877 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
NELFA-201ENST00000333877 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
NELFA-201ENST00000333877 DDX10Q13206 875 aaKnown RBP26.28■■□□□ 1.8
NELFA-201ENST00000333877 CFAP74Q9C0B2 1584 aa26.27■■□□□ 1.8
NELFA-201ENST00000333877 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
NELFA-201ENST00000333877 HSPA5P11021 654 aaKnown RBP26.24■■□□□ 1.79
NELFA-201ENST00000333877 EIF4G2P78344 907 aaKnown RBP eCLIP26.23■■□□□ 1.79
NELFA-201ENST00000333877 ZNF518AQ6AHZ1 1483 aa26.22■■□□□ 1.79
NELFA-201ENST00000333877 CCDC144AA2RUR9 1427 aa26.19■■□□□ 1.78
NELFA-201ENST00000333877 PLA2R1Q13018 1463 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms