RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
COPB2-201ENST00000333188 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
COPB2-201ENST00000333188 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
COPB2-201ENST00000333188 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
COPB2-201ENST00000333188 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
COPB2-201ENST00000333188 EIF4G2P78344 907 aaKnown RBP eCLIP12.63□□□□□ -0.39
COPB2-201ENST00000333188 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
COPB2-201ENST00000333188 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
COPB2-201ENST00000333188 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
COPB2-201ENST00000333188 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
COPB2-201ENST00000333188 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
COPB2-201ENST00000333188 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
COPB2-201ENST00000333188 HFM1A2PYH4 1435 aa12.6□□□□□ -0.39
COPB2-201ENST00000333188 TROQ12816 1431 aaPredicted RBP12.6□□□□□ -0.39
COPB2-201ENST00000333188 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
COPB2-201ENST00000333188 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
COPB2-201ENST00000333188 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
COPB2-201ENST00000333188 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
COPB2-201ENST00000333188 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
COPB2-201ENST00000333188 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.39
COPB2-201ENST00000333188 ABCC5O15440 1437 aa12.58□□□□□ -0.4
COPB2-201ENST00000333188 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.4
COPB2-201ENST00000333188 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
COPB2-201ENST00000333188 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
COPB2-201ENST00000333188 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
COPB2-201ENST00000333188 ATP10BO94823 1461 aa12.57□□□□□ -0.4
COPB2-201ENST00000333188 DAPK1P53355 1430 aa12.57□□□□□ -0.4
COPB2-201ENST00000333188 GGT6Q6P531 493 aa12.56□□□□□ -0.4
COPB2-201ENST00000333188 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
COPB2-201ENST00000333188 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
COPB2-201ENST00000333188 UGGT2Q9NYU1 1516 aa12.56□□□□□ -0.4
COPB2-201ENST00000333188 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
COPB2-201ENST00000333188 CFAP43Q8NDM7 1665 aa12.55□□□□□ -0.4
COPB2-201ENST00000333188 KIF3BO15066 747 aa12.54□□□□□ -0.4
COPB2-201ENST00000333188 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
COPB2-201ENST00000333188 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
COPB2-201ENST00000333188 KIF15Q9NS87 1388 aa12.53□□□□□ -0.4
COPB2-201ENST00000333188 NUP160Q12769 1436 aa12.53□□□□□ -0.4
COPB2-201ENST00000333188 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.4
COPB2-201ENST00000333188 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.41
COPB2-201ENST00000333188 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
COPB2-201ENST00000333188 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
COPB2-201ENST00000333188 ERCC6L2Q5T890 1561 aa12.51□□□□□ -0.41
COPB2-201ENST00000333188 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
COPB2-201ENST00000333188 MLECQ14165 292 aa12.5□□□□□ -0.41
COPB2-201ENST00000333188 CAMSAP2Q08AD1 1489 aa12.5□□□□□ -0.41
COPB2-201ENST00000333188 SPAG9O60271 1321 aaKnown RBP12.5□□□□□ -0.41
COPB2-201ENST00000333188 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
COPB2-201ENST00000333188 LRRIQ1Q96JM4 1722 aa12.49□□□□□ -0.41
COPB2-201ENST00000333188 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
COPB2-201ENST00000333188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.49□□□□□ -0.41
COPB2-201ENST00000333188 KDM6BO15054 1643 aa12.48□□□□□ -0.41
COPB2-201ENST00000333188 KIF14Q15058 1648 aa12.48□□□□□ -0.41
COPB2-201ENST00000333188 C9orf84Q5VXU9 1444 aa12.48□□□□□ -0.41
COPB2-201ENST00000333188 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
COPB2-201ENST00000333188 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
COPB2-201ENST00000333188 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
COPB2-201ENST00000333188 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.41
COPB2-201ENST00000333188 RAPGEF3O95398 923 aa12.46□□□□□ -0.41
COPB2-201ENST00000333188 FKBP8Q14318 412 aa12.46□□□□□ -0.42
COPB2-201ENST00000333188 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
COPB2-201ENST00000333188 CCDC184Q52MB2 194 aa12.45□□□□□ -0.42
COPB2-201ENST00000333188 NEFLP07196 543 aa12.44□□□□□ -0.42
COPB2-201ENST00000333188 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
COPB2-201ENST00000333188 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
COPB2-201ENST00000333188 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
COPB2-201ENST00000333188 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
COPB2-201ENST00000333188 SCAPERQ9BY12 1400 aa12.41□□□□□ -0.42
COPB2-201ENST00000333188 ROCK2O75116 1388 aaKnown RBP12.38□□□□□ -0.43
COPB2-201ENST00000333188 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
COPB2-201ENST00000333188 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
COPB2-201ENST00000333188 TMC1Q8TDI8 760 aa12.37□□□□□ -0.43
COPB2-201ENST00000333188 CHD1O14646 1710 aa12.37□□□□□ -0.43
COPB2-201ENST00000333188 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
COPB2-201ENST00000333188 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
COPB2-201ENST00000333188 TCOF1Q13428 1488 aaKnown RBP12.36□□□□□ -0.43
COPB2-201ENST00000333188 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
COPB2-201ENST00000333188 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
COPB2-201ENST00000333188 USP47Q96K76 1375 aa12.36□□□□□ -0.43
COPB2-201ENST00000333188 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
COPB2-201ENST00000333188 SUPT16HQ9Y5B9 1047 aaKnown RBP12.35□□□□□ -0.43
COPB2-201ENST00000333188 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
COPB2-201ENST00000333188 TRAPPC8Q9Y2L5 1435 aa12.34□□□□□ -0.43
COPB2-201ENST00000333188 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
COPB2-201ENST00000333188 SYCP2Q9BX26 1530 aa12.33□□□□□ -0.44
COPB2-201ENST00000333188 WASHC2CQ9Y4E1 1318 aa12.33□□□□□ -0.44
COPB2-201ENST00000333188 ARID4BQ4LE39 1312 aaPredicted RBP12.33□□□□□ -0.44
COPB2-201ENST00000333188 STK26Q9P289 416 aa12.33□□□□□ -0.44
COPB2-201ENST00000333188 DENND4BO75064 1496 aaPredicted RBP12.32□□□□□ -0.44
COPB2-201ENST00000333188 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
COPB2-201ENST00000333188 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
COPB2-201ENST00000333188 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
COPB2-201ENST00000333188 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
COPB2-201ENST00000333188 ABCA8O94911 1581 aa12.3□□□□□ -0.44
COPB2-201ENST00000333188 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
COPB2-201ENST00000333188 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
COPB2-201ENST00000333188 PZPP20742 1482 aa12.29□□□□□ -0.44
COPB2-201ENST00000333188 ABCC10Q5T3U5 1492 aa12.28□□□□□ -0.44
COPB2-201ENST00000333188 CFAP70Q5T0N1 1121 aa12.28□□□□□ -0.44
COPB2-201ENST00000333188 ASXL2Q76L83 1435 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms