RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 SLC4A3P48751 1232 aa17.75■□□□□ 0.43
SMTN-201ENST00000333137 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
SMTN-201ENST00000333137 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
SMTN-201ENST00000333137 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
SMTN-201ENST00000333137 ZHX1Q9UKY1 873 aaPredicted RBP17.72■□□□□ 0.43
SMTN-201ENST00000333137 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
SMTN-201ENST00000333137 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
SMTN-201ENST00000333137 AMER1Q5JTC6 1135 aaPredicted RBP17.71■□□□□ 0.42
SMTN-201ENST00000333137 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
SMTN-201ENST00000333137 ARID3AQ99856 593 aa17.69■□□□□ 0.42
SMTN-201ENST00000333137 PDCL3Q9H2J4 239 aa17.69■□□□□ 0.42
SMTN-201ENST00000333137 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
SMTN-201ENST00000333137 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
SMTN-201ENST00000333137 WDR62O43379 1518 aa17.66■□□□□ 0.42
SMTN-201ENST00000333137 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
SMTN-201ENST00000333137 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
SMTN-201ENST00000333137 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.41
SMTN-201ENST00000333137 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
SMTN-201ENST00000333137 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.41
SMTN-201ENST00000333137 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
SMTN-201ENST00000333137 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
SMTN-201ENST00000333137 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
SMTN-201ENST00000333137 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
SMTN-201ENST00000333137 DDRGK1Q96HY6 314 aa17.63■□□□□ 0.41
SMTN-201ENST00000333137 PDE4AP27815 886 aa17.62■□□□□ 0.41
SMTN-201ENST00000333137 SENP3-EIF4A1A0A087X0R7 540 aa17.61■□□□□ 0.41
SMTN-201ENST00000333137 CLCN1P35523 988 aa17.6■□□□□ 0.41
SMTN-201ENST00000333137 VGLL3A8MV65 326 aa17.6■□□□□ 0.41
SMTN-201ENST00000333137 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
SMTN-201ENST00000333137 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
SMTN-201ENST00000333137 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
SMTN-201ENST00000333137 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
SMTN-201ENST00000333137 FAM9BQ8IZU0 186 aa17.57■□□□□ 0.4
SMTN-201ENST00000333137 FOXD1Q16676 465 aa17.56■□□□□ 0.4
SMTN-201ENST00000333137 RSPH4AQ5TD94 716 aa17.56■□□□□ 0.4
SMTN-201ENST00000333137 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
SMTN-201ENST00000333137 POGKQ9P215 609 aa17.54■□□□□ 0.4
SMTN-201ENST00000333137 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
SMTN-201ENST00000333137 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
SMTN-201ENST00000333137 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.4
SMTN-201ENST00000333137 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.4
SMTN-201ENST00000333137 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
SMTN-201ENST00000333137 ZFP91Q96JP5 570 aaPredicted RBP17.52■□□□□ 0.39
SMTN-201ENST00000333137 TPM2P07951 284 aa17.5■□□□□ 0.39
SMTN-201ENST00000333137 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
SMTN-201ENST00000333137 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
SMTN-201ENST00000333137 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
SMTN-201ENST00000333137 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
SMTN-201ENST00000333137 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
SMTN-201ENST00000333137 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
SMTN-201ENST00000333137 BACH2Q9BYV9 841 aa17.48■□□□□ 0.39
SMTN-201ENST00000333137 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
SMTN-201ENST00000333137 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
SMTN-201ENST00000333137 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
SMTN-201ENST00000333137 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
SMTN-201ENST00000333137 ZNF830Q96NB3 372 aaPredicted RBP17.44■□□□□ 0.38
SMTN-201ENST00000333137 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
SMTN-201ENST00000333137 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
SMTN-201ENST00000333137 CDK11BP21127 795 aaKnown RBP17.43■□□□□ 0.38
SMTN-201ENST00000333137 FTSJ3Q8IY81 847 aaKnown RBP17.43■□□□□ 0.38
SMTN-201ENST00000333137 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
SMTN-201ENST00000333137 KIAA1211Q6ZU35 1233 aa17.41■□□□□ 0.38
SMTN-201ENST00000333137 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
SMTN-201ENST00000333137 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.38
SMTN-201ENST00000333137 SMAP1Q8IYB5 467 aaPredicted RBP17.39■□□□□ 0.38
SMTN-201ENST00000333137 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.38
SMTN-201ENST00000333137 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.37
SMTN-201ENST00000333137 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
SMTN-201ENST00000333137 ESPNB1AK53 854 aa17.39■□□□□ 0.37
SMTN-201ENST00000333137 TRIM44Q96DX7 344 aaPredicted RBP17.39■□□□□ 0.37
SMTN-201ENST00000333137 XRCC6P12956 609 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMTN-201ENST00000333137 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
SMTN-201ENST00000333137 PPP4R3BQ5MIZ7 849 aa17.36■□□□□ 0.37
SMTN-201ENST00000333137 SECISBP2LQ93073 1101 aaKnown RBP17.36■□□□□ 0.37
SMTN-201ENST00000333137 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
SMTN-201ENST00000333137 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
SMTN-201ENST00000333137 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
SMTN-201ENST00000333137 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
SMTN-201ENST00000333137 TMEM51Q9NW97 253 aa17.34■□□□□ 0.37
SMTN-201ENST00000333137 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SMTN-201ENST00000333137 ADAMTS12P58397 1594 aa17.33■□□□□ 0.36
SMTN-201ENST00000333137 E9PSI1 815 aa17.33■□□□□ 0.36
SMTN-201ENST00000333137 MAGI1Q96QZ7 1491 aaPredicted RBP17.32■□□□□ 0.36
SMTN-201ENST00000333137 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
SMTN-201ENST00000333137 MAP7D2Q96T17 732 aa17.31■□□□□ 0.36
SMTN-201ENST00000333137 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
SMTN-201ENST00000333137 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
SMTN-201ENST00000333137 ZBED9Q6R2W3 1325 aa17.31■□□□□ 0.36
SMTN-201ENST00000333137 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
SMTN-201ENST00000333137 CUL7Q14999 1698 aa17.3■□□□□ 0.36
SMTN-201ENST00000333137 MS4A1P11836 297 aa17.29■□□□□ 0.36
SMTN-201ENST00000333137 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.36
SMTN-201ENST00000333137 SLKQ9H2G2 1235 aaPredicted RBP17.27■□□□□ 0.36
SMTN-201ENST00000333137 ERBB4Q15303 1308 aa17.27■□□□□ 0.35
SMTN-201ENST00000333137 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.35
SMTN-201ENST00000333137 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
SMTN-201ENST00000333137 TEX2Q8IWB9 1127 aa17.24■□□□□ 0.35
SMTN-201ENST00000333137 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
SMTN-201ENST00000333137 DMTNQ08495 405 aa17.24■□□□□ 0.35
SMTN-201ENST00000333137 KIAA0586Q9BVV6 1533 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms