RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KDM6BO15054 1643 aa32.42■■■□□ 2.78
TSKU-201ENST00000333090 TCOF1Q13428 1488 aaKnown RBP32.4■■■□□ 2.78
TSKU-201ENST00000333090 B4GALNT3Q6L9W6 998 aa32.4■■■□□ 2.78
TSKU-201ENST00000333090 NCOA1Q15788 1441 aa32.4■■■□□ 2.78
TSKU-201ENST00000333090 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
TSKU-201ENST00000333090 ZBED9Q6R2W3 1325 aa32.37■■■□□ 2.77
TSKU-201ENST00000333090 AKNAQ7Z591 1439 aa32.36■■■□□ 2.77
TSKU-201ENST00000333090 CDK13Q14004 1512 aaKnown RBP32.32■■■□□ 2.76
TSKU-201ENST00000333090 PBRM1Q86U86 1689 aa32.32■■■□□ 2.76
TSKU-201ENST00000333090 NBPF8Q3BBV2 869 aa32.31■■■□□ 2.76
TSKU-201ENST00000333090 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
TSKU-201ENST00000333090 KIF7Q2M1P5 1343 aa32.26■■■□□ 2.75
TSKU-201ENST00000333090 IQGAP2Q13576 1575 aa32.25■■■□□ 2.75
TSKU-201ENST00000333090 MIA2Q96PC5 1412 aa32.24■■■□□ 2.75
TSKU-201ENST00000333090 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
TSKU-201ENST00000333090 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
TSKU-201ENST00000333090 ANKRD30BQ9BXX2 1392 aa32.22■■■□□ 2.75
TSKU-201ENST00000333090 RPRD2Q5VT52 1461 aaKnown RBP32.21■■■□□ 2.75
TSKU-201ENST00000333090 CNGB1Q14028 1251 aaPredicted RBP32.18■■■□□ 2.74
TSKU-201ENST00000333090 TEX14Q8IWB6 1497 aa32.17■■■□□ 2.74
TSKU-201ENST00000333090 FBLN2P98095 1184 aa32.17■■■□□ 2.74
TSKU-201ENST00000333090 SLC4A1APQ9BWU0 796 aaKnown RBP32.15■■■□□ 2.74
TSKU-201ENST00000333090 SPATA31E1Q6ZUB1 1445 aa32.15■■■□□ 2.74
TSKU-201ENST00000333090 ZNF644Q9H582 1327 aaPredicted RBP32.14■■■□□ 2.74
TSKU-201ENST00000333090 DAPK1P53355 1430 aa32.1■■■□□ 2.73
TSKU-201ENST00000333090 ROCK1Q13464 1354 aa32.08■■■□□ 2.73
TSKU-201ENST00000333090 POLR3GLQ9BT43 218 aa32.07■■■□□ 2.73
TSKU-201ENST00000333090 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
TSKU-201ENST00000333090 WDR62O43379 1518 aa32.05■■■□□ 2.72
TSKU-201ENST00000333090 SMG6Q86US8 1419 aaKnown RBP32.04■■■□□ 2.72
TSKU-201ENST00000333090 IFT140Q96RY7 1462 aa32.04■■■□□ 2.72
TSKU-201ENST00000333090 ABCC5O15440 1437 aa32.03■■■□□ 2.72
TSKU-201ENST00000333090 NOP58Q9Y2X3 529 aaKnown RBP32.03■■■□□ 2.72
TSKU-201ENST00000333090 POLR1AO95602 1720 aaPredicted RBP32.01■■■□□ 2.72
TSKU-201ENST00000333090 NUDCQ9Y266 331 aa32.01■■■□□ 2.71
TSKU-201ENST00000333090 DISP1Q96F81 1524 aa32.01■■■□□ 2.71
TSKU-201ENST00000333090 ZNF326Q5BKZ1 582 aaKnown RBP31.99■■■□□ 2.71
TSKU-201ENST00000333090 DHX29Q7Z478 1369 aaKnown RBP31.99■■■□□ 2.71
TSKU-201ENST00000333090 SENP3-EIF4A1A0A087X0R7 540 aa31.99■■■□□ 2.71
TSKU-201ENST00000333090 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
TSKU-201ENST00000333090 CHMP7Q8WUX9 453 aaPredicted RBP31.98■■■□□ 2.71
TSKU-201ENST00000333090 CCDC136Q96JN2 1154 aa31.98■■■□□ 2.71
TSKU-201ENST00000333090 DEKP35659 375 aaKnown RBP31.98■■■□□ 2.71
TSKU-201ENST00000333090 DNMT1P26358 1616 aaKnown RBP31.95■■■□□ 2.71
TSKU-201ENST00000333090 PAK3O75914 559 aaPredicted RBP31.95■■■□□ 2.7
TSKU-201ENST00000333090 KIAA0586Q9BVV6 1533 aa31.93■■■□□ 2.7
TSKU-201ENST00000333090 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
TSKU-201ENST00000333090 NBR1Q14596 966 aa31.93■■■□□ 2.7
TSKU-201ENST00000333090 USP47Q96K76 1375 aa31.93■■■□□ 2.7
TSKU-201ENST00000333090 NUP153P49790 1475 aaKnown RBP31.93■■■□□ 2.7
TSKU-201ENST00000333090 GRIN2AQ12879 1464 aa31.93■■■□□ 2.7
TSKU-201ENST00000333090 ZNF777Q9ULD5 760 aaPredicted RBP31.91■■■□□ 2.7
TSKU-201ENST00000333090 KIAA0556O60303 1618 aa31.91■■■□□ 2.7
TSKU-201ENST00000333090 RNF123Q5XPI4 1314 aa31.9■■■□□ 2.7
TSKU-201ENST00000333090 PRG4Q92954 1404 aaPredicted RBP31.88■■■□□ 2.69
TSKU-201ENST00000333090 PZPP20742 1482 aa31.87■■■□□ 2.69
TSKU-201ENST00000333090 PLB1Q6P1J6 1458 aa31.86■■■□□ 2.69
TSKU-201ENST00000333090 BCORL1Q5H9F3 1711 aa31.84■■■□□ 2.69
TSKU-201ENST00000333090 ANP32AP39687 249 aaKnown RBP31.84■■■□□ 2.69
TSKU-201ENST00000333090 TMC1Q8TDI8 760 aa31.83■■■□□ 2.69
TSKU-201ENST00000333090 MBD5Q9P267 1494 aa31.82■■■□□ 2.68
TSKU-201ENST00000333090 PNISRQ8TF01 805 aaKnown RBP31.82■■■□□ 2.68
TSKU-201ENST00000333090 PKD2Q13563 968 aa31.78■■■□□ 2.68
TSKU-201ENST00000333090 KIAA1107Q9UPP5 1409 aa31.78■■■□□ 2.68
TSKU-201ENST00000333090 IPO9Q96P70 1041 aaKnown RBP31.77■■■□□ 2.68
TSKU-201ENST00000333090 CFDP1Q9UEE9 299 aaPredicted RBP31.77■■■□□ 2.68
TSKU-201ENST00000333090 RAPGEF6Q8TEU7 1601 aa31.76■■■□□ 2.68
TSKU-201ENST00000333090 CEP170Q5SW79 1584 aa31.76■■■□□ 2.67
TSKU-201ENST00000333090 ARID4BQ4LE39 1312 aaPredicted RBP31.76■■■□□ 2.67
TSKU-201ENST00000333090 JPH4Q96JJ6 628 aa31.75■■■□□ 2.67
TSKU-201ENST00000333090 KDM5CP41229 1560 aa31.72■■■□□ 2.67
TSKU-201ENST00000333090 CAMSAP2Q08AD1 1489 aa31.72■■■□□ 2.67
TSKU-201ENST00000333090 KIF14Q15058 1648 aa31.71■■■□□ 2.67
TSKU-201ENST00000333090 ZBTB47Q9UFB7 747 aaPredicted RBP31.7■■■□□ 2.67
TSKU-201ENST00000333090 ROCK2O75116 1388 aaKnown RBP31.69■■■□□ 2.66
TSKU-201ENST00000333090 CARD11Q9BXL7 1154 aa31.69■■■□□ 2.66
TSKU-201ENST00000333090 KIF15Q9NS87 1388 aa31.65■■■□□ 2.66
TSKU-201ENST00000333090 SYNJ2O15056 1496 aa31.65■■■□□ 2.66
TSKU-201ENST00000333090 TROQ12816 1431 aaPredicted RBP31.62■■■□□ 2.65
TSKU-201ENST00000333090 MAGI1Q96QZ7 1491 aaPredicted RBP31.62■■■□□ 2.65
TSKU-201ENST00000333090 RTL5Q5HYW3 569 aaPredicted RBP31.62■■■□□ 2.65
TSKU-201ENST00000333090 LRPPRCP42704 1394 aaKnown RBP31.6■■■□□ 2.65
TSKU-201ENST00000333090 ANKRD30AQ9BXX3 1397 aa31.6■■■□□ 2.65
TSKU-201ENST00000333090 ADGBQ8N7X0 1667 aa31.6■■■□□ 2.65
TSKU-201ENST00000333090 ST20-MTHFSA0A0A6YYL1 179 aa31.6■■■□□ 2.65
TSKU-201ENST00000333090 KDM2AQ9Y2K7 1162 aa31.6■■■□□ 2.65
TSKU-201ENST00000333090 RALGAPBQ86X10 1494 aa31.6■■■□□ 2.65
TSKU-201ENST00000333090 MYBBP1AQ9BQG0 1328 aaKnown RBP31.59■■■□□ 2.65
TSKU-201ENST00000333090 RRP1P56182 461 aaKnown RBP31.59■■■□□ 2.65
TSKU-201ENST00000333090 GPATCH8Q9UKJ3 1502 aaKnown RBP31.58■■■□□ 2.65
TSKU-201ENST00000333090 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
TSKU-201ENST00000333090 ANKRD50Q9ULJ7 1429 aa31.58■■■□□ 2.65
TSKU-201ENST00000333090 SALL2Q9Y467 1007 aaPredicted RBP31.57■■■□□ 2.64
TSKU-201ENST00000333090 BRD4O60885 1362 aaPredicted RBP31.57■■■□□ 2.64
TSKU-201ENST00000333090 ADGRL2O95490 1459 aa31.57■■■□□ 2.64
TSKU-201ENST00000333090 EXOC6Q8TAG9 804 aa31.56■■■□□ 2.64
TSKU-201ENST00000333090 NPM2Q86SE8 214 aaKnown RBP31.55■■■□□ 2.64
TSKU-201ENST00000333090 NUP155O75694 1391 aa31.55■■■□□ 2.64
TSKU-201ENST00000333090 RALBP1Q15311 655 aa31.54■■■□□ 2.64
TSKU-201ENST00000333090 ITSN2Q9NZM3 1697 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms