RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 FKBP8Q14318 412 aa26.79■■□□□ 1.88
LAMP1-201ENST00000332556 KDM5BQ9UGL1 1544 aa26.78■■□□□ 1.88
LAMP1-201ENST00000332556 HSPA5P11021 654 aaKnown RBP26.78■■□□□ 1.88
LAMP1-201ENST00000332556 CFDP1Q9UEE9 299 aaPredicted RBP26.78■■□□□ 1.88
LAMP1-201ENST00000332556 DAPK1P53355 1430 aa26.77■■□□□ 1.88
LAMP1-201ENST00000332556 RAPGEF6Q8TEU7 1601 aa26.77■■□□□ 1.88
LAMP1-201ENST00000332556 ABCC5O15440 1437 aa26.77■■□□□ 1.88
LAMP1-201ENST00000332556 MIA2Q96PC5 1412 aa26.76■■□□□ 1.87
LAMP1-201ENST00000332556 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
LAMP1-201ENST00000332556 CDK11AQ9UQ88 783 aaPredicted RBP26.75■■□□□ 1.87
LAMP1-201ENST00000332556 GCC2Q8IWJ2 1684 aa26.72■■□□□ 1.87
LAMP1-201ENST00000332556 CNGB1Q14028 1251 aaPredicted RBP26.72■■□□□ 1.87
LAMP1-201ENST00000332556 SYNJ2O15056 1496 aa26.7■■□□□ 1.86
LAMP1-201ENST00000332556 NBPF8Q3BBV2 869 aa26.68■■□□□ 1.86
LAMP1-201ENST00000332556 KIF14Q15058 1648 aa26.68■■□□□ 1.86
LAMP1-201ENST00000332556 ANP32EQ9BTT0 268 aa26.68■■□□□ 1.86
LAMP1-201ENST00000332556 WASHC2AQ641Q2 1341 aa26.68■■□□□ 1.86
LAMP1-201ENST00000332556 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
LAMP1-201ENST00000332556 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
LAMP1-201ENST00000332556 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
LAMP1-201ENST00000332556 TROQ12816 1431 aaPredicted RBP26.63■■□□□ 1.85
LAMP1-201ENST00000332556 CAMSAP2Q08AD1 1489 aa26.61■■□□□ 1.85
LAMP1-201ENST00000332556 DNMT1P26358 1616 aaKnown RBP26.59■■□□□ 1.85
LAMP1-201ENST00000332556 GPATCH8Q9UKJ3 1502 aaKnown RBP26.59■■□□□ 1.85
LAMP1-201ENST00000332556 EIF4G2P78344 907 aaKnown RBP eCLIP26.59■■□□□ 1.85
LAMP1-201ENST00000332556 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.84
LAMP1-201ENST00000332556 PLEKHD1A6NEE1 506 aa26.57■■□□□ 1.84
LAMP1-201ENST00000332556 CARMIL2Q6F5E8 1435 aa26.57■■□□□ 1.84
LAMP1-201ENST00000332556 AKNAQ7Z591 1439 aa26.57■■□□□ 1.84
LAMP1-201ENST00000332556 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
LAMP1-201ENST00000332556 POLR3GLQ9BT43 218 aa26.56■■□□□ 1.84
LAMP1-201ENST00000332556 HNRNPMP52272 730 aaKnown RBP eCLIP26.54■■□□□ 1.847e-7■■■■■ 35.7
LAMP1-201ENST00000332556 NUP160Q12769 1436 aa26.53■■□□□ 1.84
LAMP1-201ENST00000332556 NEFLP07196 543 aa26.52■■□□□ 1.84
LAMP1-201ENST00000332556 ROCK1Q13464 1354 aa26.52■■□□□ 1.84
LAMP1-201ENST00000332556 PKD2Q13563 968 aa26.52■■□□□ 1.84
LAMP1-201ENST00000332556 CCER2I3L3R5 266 aa26.52■■□□□ 1.84
LAMP1-201ENST00000332556 NCOA1Q15788 1441 aa26.5■■□□□ 1.83
LAMP1-201ENST00000332556 ATP10BO94823 1461 aa26.48■■□□□ 1.83
LAMP1-201ENST00000332556 HNRNPUQ00839 825 aaKnown RBP eCLIP26.47■■□□□ 1.83
LAMP1-201ENST00000332556 PZPP20742 1482 aa26.46■■□□□ 1.83
LAMP1-201ENST00000332556 SENP3-EIF4A1A0A087X0R7 540 aa26.45■■□□□ 1.83
LAMP1-201ENST00000332556 RPRD2Q5VT52 1461 aaKnown RBP26.45■■□□□ 1.82
LAMP1-201ENST00000332556 RBM19Q9Y4C8 960 aaKnown RBP26.44■■□□□ 1.82
LAMP1-201ENST00000332556 IRX6P78412 446 aaPredicted RBP26.42■■□□□ 1.82
LAMP1-201ENST00000332556 KDM2AQ9Y2K7 1162 aa26.42■■□□□ 1.82
LAMP1-201ENST00000332556 TEX14Q8IWB6 1497 aa26.41■■□□□ 1.82
LAMP1-201ENST00000332556 FAM9BQ8IZU0 186 aa26.39■■□□□ 1.81
LAMP1-201ENST00000332556 PTPRGP23470 1445 aa26.39■■□□□ 1.81
LAMP1-201ENST00000332556 NUP155O75694 1391 aa26.38■■□□□ 1.81
LAMP1-201ENST00000332556 ANKRD50Q9ULJ7 1429 aa26.37■■□□□ 1.81
LAMP1-201ENST00000332556 ANKRD30AQ9BXX3 1397 aa26.37■■□□□ 1.81
LAMP1-201ENST00000332556 CCDC7Q96M83 1385 aa26.36■■□□□ 1.81
LAMP1-201ENST00000332556 TSPY4P0CV99 314 aa26.36■■□□□ 1.81
LAMP1-201ENST00000332556 TSPY10P0CW01 314 aa26.36■■□□□ 1.81
LAMP1-201ENST00000332556 ITSN2Q9NZM3 1697 aa26.35■■□□□ 1.81
LAMP1-201ENST00000332556 KIF7Q2M1P5 1343 aa26.35■■□□□ 1.81
LAMP1-201ENST00000332556 ABCA8O94911 1581 aa26.35■■□□□ 1.81
LAMP1-201ENST00000332556 CDC42BPAQ5VT25 1732 aa26.34■■□□□ 1.81
LAMP1-201ENST00000332556 C9orf84Q5VXU9 1444 aa26.33■■□□□ 1.8
LAMP1-201ENST00000332556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.32■■□□□ 1.8
LAMP1-201ENST00000332556 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
LAMP1-201ENST00000332556 CNTLNQ9NXG0 1405 aa26.3■■□□□ 1.8
LAMP1-201ENST00000332556 KIAA1107Q9UPP5 1409 aa26.3■■□□□ 1.8
LAMP1-201ENST00000332556 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
LAMP1-201ENST00000332556 PRKRIP1Q9H875 184 aaPredicted RBP26.28■■□□□ 1.8
LAMP1-201ENST00000332556 ERCC6L2Q5T890 1561 aa26.27■■□□□ 1.8
LAMP1-201ENST00000332556 ADGBQ8N7X0 1667 aa26.27■■□□□ 1.8
LAMP1-201ENST00000332556 MRS2Q9HD23 443 aa26.27■■□□□ 1.8
LAMP1-201ENST00000332556 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
LAMP1-201ENST00000332556 CROCC2H7BZ55 1655 aa26.25■■□□□ 1.79
LAMP1-201ENST00000332556 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
LAMP1-201ENST00000332556 RGL3Q3MIN7 710 aa26.23■■□□□ 1.79
LAMP1-201ENST00000332556 CHD1O14646 1710 aa26.23■■□□□ 1.79
LAMP1-201ENST00000332556 DCAF11Q8TEB1 546 aa26.22■■□□□ 1.79
LAMP1-201ENST00000332556 SPATA31E1Q6ZUB1 1445 aa26.22■■□□□ 1.79
LAMP1-201ENST00000332556 USP47Q96K76 1375 aa26.2■■□□□ 1.79
LAMP1-201ENST00000332556 BCL11AQ9H165 835 aa26.19■■□□□ 1.78
LAMP1-201ENST00000332556 MSH5O43196 834 aa26.17■■□□□ 1.78
LAMP1-201ENST00000332556 CARD11Q9BXL7 1154 aa26.17■■□□□ 1.78
LAMP1-201ENST00000332556 MBD5Q9P267 1494 aa26.15■■□□□ 1.78
LAMP1-201ENST00000332556 SAMD9LQ8IVG5 1584 aa26.14■■□□□ 1.77
LAMP1-201ENST00000332556 BCORL1Q5H9F3 1711 aa26.13■■□□□ 1.77
LAMP1-201ENST00000332556 CDC42BPBQ9Y5S2 1711 aa26.12■■□□□ 1.77
LAMP1-201ENST00000332556 ST20-MTHFSA0A0A6YYL1 179 aa26.11■■□□□ 1.77
LAMP1-201ENST00000332556 SYCP2Q9BX26 1530 aa26.1■■□□□ 1.77
LAMP1-201ENST00000332556 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
LAMP1-201ENST00000332556 ARHGAP5Q13017 1502 aa26.09■■□□□ 1.77
LAMP1-201ENST00000332556 CCDC141Q6ZP82 1450 aa26.05■■□□□ 1.76
LAMP1-201ENST00000332556 NBPF1Q3BBV0 1214 aa26.04■■□□□ 1.76
LAMP1-201ENST00000332556 SHANK2Q9UPX8 1470 aa26.03■■□□□ 1.76
LAMP1-201ENST00000332556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.765e-6■□□□□ 9.5
LAMP1-201ENST00000332556 DHX29Q7Z478 1369 aaKnown RBP26.01■■□□□ 1.75
LAMP1-201ENST00000332556 PREX2Q70Z35 1606 aa25.99■■□□□ 1.75
LAMP1-201ENST00000332556 PLEKHH2Q8IVE3 1493 aa25.99■■□□□ 1.75
LAMP1-201ENST00000332556 FAM135AQ9P2D6 1515 aa25.98■■□□□ 1.75
LAMP1-201ENST00000332556 KDM5CP41229 1560 aa25.98■■□□□ 1.75
LAMP1-201ENST00000332556 ROCK2O75116 1388 aaKnown RBP25.97■■□□□ 1.75
LAMP1-201ENST00000332556 ARHGEF12Q9NZN5 1544 aa25.96■■□□□ 1.75
LAMP1-201ENST00000332556 ARHGEF5Q12774 1597 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms