RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
SHC4-201ENST00000332408 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
SHC4-201ENST00000332408 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
SHC4-201ENST00000332408 ATP10BO94823 1461 aa16.55■□□□□ 0.24
SHC4-201ENST00000332408 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
SHC4-201ENST00000332408 C14orf37Q86TY3 774 aa16.53■□□□□ 0.24
SHC4-201ENST00000332408 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
SHC4-201ENST00000332408 FANCAO15360 1455 aa16.51■□□□□ 0.23
SHC4-201ENST00000332408 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
SHC4-201ENST00000332408 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
SHC4-201ENST00000332408 KIF14Q15058 1648 aa16.5■□□□□ 0.23
SHC4-201ENST00000332408 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
SHC4-201ENST00000332408 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
SHC4-201ENST00000332408 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
SHC4-201ENST00000332408 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
SHC4-201ENST00000332408 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
SHC4-201ENST00000332408 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
SHC4-201ENST00000332408 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.22
SHC4-201ENST00000332408 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
SHC4-201ENST00000332408 PLCH2O75038 1416 aa16.43■□□□□ 0.22
SHC4-201ENST00000332408 NCOA2Q15596 1464 aa16.41■□□□□ 0.22
SHC4-201ENST00000332408 NEO1Q92859 1461 aa16.4■□□□□ 0.22
SHC4-201ENST00000332408 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
SHC4-201ENST00000332408 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
SHC4-201ENST00000332408 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
SHC4-201ENST00000332408 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
SHC4-201ENST00000332408 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
SHC4-201ENST00000332408 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
SHC4-201ENST00000332408 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
SHC4-201ENST00000332408 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
SHC4-201ENST00000332408 HRCP23327 699 aa16.35■□□□□ 0.21
SHC4-201ENST00000332408 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
SHC4-201ENST00000332408 ABCA8O94911 1581 aa16.35■□□□□ 0.21
SHC4-201ENST00000332408 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
SHC4-201ENST00000332408 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
SHC4-201ENST00000332408 NUP155O75694 1391 aa16.33■□□□□ 0.21
SHC4-201ENST00000332408 KDM6BO15054 1643 aa16.33■□□□□ 0.21
SHC4-201ENST00000332408 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
SHC4-201ENST00000332408 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
SHC4-201ENST00000332408 SAMD9Q5K651 1589 aa16.32■□□□□ 0.2
SHC4-201ENST00000332408 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
SHC4-201ENST00000332408 SUPT6HQ7KZ85 1726 aaKnown RBP16.3■□□□□ 0.2
SHC4-201ENST00000332408 FGD6Q6ZV73 1430 aa16.29■□□□□ 0.2
SHC4-201ENST00000332408 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
SHC4-201ENST00000332408 CFAP74Q9C0B2 1584 aa16.29■□□□□ 0.2
SHC4-201ENST00000332408 ZCCHC11Q5TAX3 1644 aaKnown RBP16.28■□□□□ 0.2
SHC4-201ENST00000332408 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
SHC4-201ENST00000332408 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
SHC4-201ENST00000332408 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
SHC4-201ENST00000332408 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
SHC4-201ENST00000332408 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
SHC4-201ENST00000332408 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
SHC4-201ENST00000332408 ADCY10Q96PN6 1610 aa16.25■□□□□ 0.19
SHC4-201ENST00000332408 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
SHC4-201ENST00000332408 RGL3Q3MIN7 710 aa16.25■□□□□ 0.19
SHC4-201ENST00000332408 C9orf84Q5VXU9 1444 aa16.25■□□□□ 0.19
SHC4-201ENST00000332408 ANKLE2Q86XL3 938 aa16.24■□□□□ 0.19
SHC4-201ENST00000332408 KIAA1107Q9UPP5 1409 aa16.23■□□□□ 0.19
SHC4-201ENST00000332408 ATP10AO60312 1499 aa16.22■□□□□ 0.19
SHC4-201ENST00000332408 PKD2Q13563 968 aa16.21■□□□□ 0.19
SHC4-201ENST00000332408 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.18
SHC4-201ENST00000332408 MAP3K1Q13233 1512 aa16.2■□□□□ 0.18
SHC4-201ENST00000332408 CNTLNQ9NXG0 1405 aa16.2■□□□□ 0.18
SHC4-201ENST00000332408 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
SHC4-201ENST00000332408 MAGI2Q86UL8 1455 aa16.19■□□□□ 0.18
SHC4-201ENST00000332408 HAP1P54257 671 aaPredicted RBP16.18■□□□□ 0.18
SHC4-201ENST00000332408 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
SHC4-201ENST00000332408 TONSLQ96HA7 1378 aa16.18■□□□□ 0.18
SHC4-201ENST00000332408 DHX29Q7Z478 1369 aaKnown RBP16.18■□□□□ 0.18
SHC4-201ENST00000332408 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
SHC4-201ENST00000332408 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
SHC4-201ENST00000332408 POGKQ9P215 609 aa16.17■□□□□ 0.18
SHC4-201ENST00000332408 CEBPAP49715 358 aaPredicted RBP16.16■□□□□ 0.18
SHC4-201ENST00000332408 SLC52A1Q9NWF4 448 aa16.16■□□□□ 0.18
SHC4-201ENST00000332408 A2MP01023 1474 aa16.15■□□□□ 0.18
SHC4-201ENST00000332408 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
SHC4-201ENST00000332408 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
SHC4-201ENST00000332408 GLI2P10070 1586 aa16.13■□□□□ 0.17
SHC4-201ENST00000332408 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
SHC4-201ENST00000332408 SETD5Q9C0A6 1442 aa16.12■□□□□ 0.17
SHC4-201ENST00000332408 CFAP43Q8NDM7 1665 aa16.12■□□□□ 0.17
SHC4-201ENST00000332408 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
SHC4-201ENST00000332408 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
SHC4-201ENST00000332408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHC4-201ENST00000332408 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
SHC4-201ENST00000332408 DAPK1P53355 1430 aa16.1■□□□□ 0.17
SHC4-201ENST00000332408 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
SHC4-201ENST00000332408 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
SHC4-201ENST00000332408 MPHOSPH9Q99550 1183 aa16.08■□□□□ 0.16
SHC4-201ENST00000332408 TNRQ92752 1358 aa16.08■□□□□ 0.16
SHC4-201ENST00000332408 YTHDC1Q96MU7 727 aaKnown RBP16.07■□□□□ 0.16
SHC4-201ENST00000332408 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
SHC4-201ENST00000332408 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
SHC4-201ENST00000332408 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
SHC4-201ENST00000332408 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
SHC4-201ENST00000332408 HSPA2P54652 639 aa16.02■□□□□ 0.16
SHC4-201ENST00000332408 ATF3P18847 181 aa16.02■□□□□ 0.16
SHC4-201ENST00000332408 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
SHC4-201ENST00000332408 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
SHC4-201ENST00000332408 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms