RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 UACAQ9BZF9 1416 aa14.53□□□□□ -0.08
PRAMEF1-201ENST00000332296 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
PRAMEF1-201ENST00000332296 CDK13Q14004 1512 aaKnown RBP14.53□□□□□ -0.08
PRAMEF1-201ENST00000332296 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.08
PRAMEF1-201ENST00000332296 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.08
PRAMEF1-201ENST00000332296 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.08
PRAMEF1-201ENST00000332296 FAM50AQ14320 339 aaKnown RBP14.52□□□□□ -0.08
PRAMEF1-201ENST00000332296 CCDC18Q5T9S5 1454 aa14.51□□□□□ -0.09
PRAMEF1-201ENST00000332296 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
PRAMEF1-201ENST00000332296 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
PRAMEF1-201ENST00000332296 ADCY10Q96PN6 1610 aa14.47□□□□□ -0.09
PRAMEF1-201ENST00000332296 ATP10BO94823 1461 aa14.47□□□□□ -0.09
PRAMEF1-201ENST00000332296 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
PRAMEF1-201ENST00000332296 MAGI3Q5TCQ9 1506 aa14.45□□□□□ -0.1
PRAMEF1-201ENST00000332296 UHRF1BP1LA0JNW5 1464 aa14.45□□□□□ -0.1
PRAMEF1-201ENST00000332296 CYB5RLQ6IPT4 315 aa14.45□□□□□ -0.1
PRAMEF1-201ENST00000332296 KCNH8Q96L42 1107 aa14.43□□□□□ -0.1
PRAMEF1-201ENST00000332296 ZCCHC11Q5TAX3 1644 aaKnown RBP14.42□□□□□ -0.1
PRAMEF1-201ENST00000332296 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
PRAMEF1-201ENST00000332296 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
PRAMEF1-201ENST00000332296 FGD6Q6ZV73 1430 aa14.41□□□□□ -0.1
PRAMEF1-201ENST00000332296 KDM5BQ9UGL1 1544 aa14.4□□□□□ -0.1
PRAMEF1-201ENST00000332296 TULP1O00294 542 aaPredicted RBP14.4□□□□□ -0.1
PRAMEF1-201ENST00000332296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRAMEF1-201ENST00000332296 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.1
PRAMEF1-201ENST00000332296 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
PRAMEF1-201ENST00000332296 ARXQ96QS3 562 aa14.39□□□□□ -0.11
PRAMEF1-201ENST00000332296 SUPT6HQ7KZ85 1726 aaKnown RBP14.39□□□□□ -0.11
PRAMEF1-201ENST00000332296 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
PRAMEF1-201ENST00000332296 TROQ12816 1431 aaPredicted RBP14.37□□□□□ -0.11
PRAMEF1-201ENST00000332296 PTPRKQ15262 1439 aa14.37□□□□□ -0.11
PRAMEF1-201ENST00000332296 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRAMEF1-201ENST00000332296 NCOA2Q15596 1464 aa14.36□□□□□ -0.11
PRAMEF1-201ENST00000332296 PTPN23Q9H3S7 1636 aa14.35□□□□□ -0.11
PRAMEF1-201ENST00000332296 KIF14Q15058 1648 aa14.35□□□□□ -0.11
PRAMEF1-201ENST00000332296 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
PRAMEF1-201ENST00000332296 HIRIP3Q9BW71 556 aaPredicted RBP14.33□□□□□ -0.12
PRAMEF1-201ENST00000332296 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
PRAMEF1-201ENST00000332296 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
PRAMEF1-201ENST00000332296 MYOM3Q5VTT5 1437 aa14.3□□□□□ -0.12
PRAMEF1-201ENST00000332296 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
PRAMEF1-201ENST00000332296 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
PRAMEF1-201ENST00000332296 WDR7Q9Y4E6 1490 aa14.29□□□□□ -0.12
PRAMEF1-201ENST00000332296 NAIPQ13075 1403 aa14.28□□□□□ -0.12
PRAMEF1-201ENST00000332296 KDM2AQ9Y2K7 1162 aa14.28□□□□□ -0.12
PRAMEF1-201ENST00000332296 ABCC10Q5T3U5 1492 aa14.26□□□□□ -0.13
PRAMEF1-201ENST00000332296 TONSLQ96HA7 1378 aa14.26□□□□□ -0.13
PRAMEF1-201ENST00000332296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.13
PRAMEF1-201ENST00000332296 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
PRAMEF1-201ENST00000332296 CDC42BPAQ5VT25 1732 aa14.26□□□□□ -0.13
PRAMEF1-201ENST00000332296 ITSN2Q9NZM3 1697 aa14.24□□□□□ -0.13
PRAMEF1-201ENST00000332296 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
PRAMEF1-201ENST00000332296 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
PRAMEF1-201ENST00000332296 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
PRAMEF1-201ENST00000332296 MYO5CQ9NQX4 1742 aa14.22□□□□□ -0.13
PRAMEF1-201ENST00000332296 KDM6BO15054 1643 aa14.21□□□□□ -0.13
PRAMEF1-201ENST00000332296 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.13
PRAMEF1-201ENST00000332296 CFDP1Q9UEE9 299 aaPredicted RBP14.21□□□□□ -0.13
PRAMEF1-201ENST00000332296 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
PRAMEF1-201ENST00000332296 DENND4BO75064 1496 aaPredicted RBP14.2□□□□□ -0.14
PRAMEF1-201ENST00000332296 TCOF1Q13428 1488 aaKnown RBP14.2□□□□□ -0.14
PRAMEF1-201ENST00000332296 MIA2Q96PC5 1412 aa14.2□□□□□ -0.14
PRAMEF1-201ENST00000332296 ZNF777Q9ULD5 760 aaPredicted RBP14.2□□□□□ -0.14
PRAMEF1-201ENST00000332296 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
PRAMEF1-201ENST00000332296 ABCA9Q8IUA7 1624 aa14.19□□□□□ -0.14
PRAMEF1-201ENST00000332296 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
PRAMEF1-201ENST00000332296 ARHGAP5Q13017 1502 aa14.17□□□□□ -0.14
PRAMEF1-201ENST00000332296 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
PRAMEF1-201ENST00000332296 CCER2I3L3R5 266 aa14.16□□□□□ -0.14
PRAMEF1-201ENST00000332296 ANP32CO43423 234 aa14.16□□□□□ -0.14
PRAMEF1-201ENST00000332296 RRP7BPQ9NSQ0 103 aa14.16□□□□□ -0.14
PRAMEF1-201ENST00000332296 PLCH2O75038 1416 aa14.15□□□□□ -0.14
PRAMEF1-201ENST00000332296 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
PRAMEF1-201ENST00000332296 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
PRAMEF1-201ENST00000332296 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
PRAMEF1-201ENST00000332296 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
PRAMEF1-201ENST00000332296 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
PRAMEF1-201ENST00000332296 CD109Q6YHK3 1445 aa14.12□□□□□ -0.15
PRAMEF1-201ENST00000332296 SAMD9LQ8IVG5 1584 aa14.12□□□□□ -0.15
PRAMEF1-201ENST00000332296 MYT1Q01538 1121 aa14.12□□□□□ -0.15
PRAMEF1-201ENST00000332296 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
PRAMEF1-201ENST00000332296 KIF13AQ9H1H9 1805 aa14.1□□□□□ -0.15
PRAMEF1-201ENST00000332296 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
PRAMEF1-201ENST00000332296 TSPOAP1O95153 1857 aa14.1□□□□□ -0.15
PRAMEF1-201ENST00000332296 GLI2P10070 1586 aa14.1□□□□□ -0.15
PRAMEF1-201ENST00000332296 MAP3K4Q9Y6R4 1608 aa14.1□□□□□ -0.15
PRAMEF1-201ENST00000332296 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
PRAMEF1-201ENST00000332296 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRAMEF1-201ENST00000332296 FANCAO15360 1455 aa14.09□□□□□ -0.15
PRAMEF1-201ENST00000332296 DNMT1P26358 1616 aaKnown RBP14.08□□□□□ -0.15
PRAMEF1-201ENST00000332296 SYCP2Q9BX26 1530 aa14.08□□□□□ -0.16
PRAMEF1-201ENST00000332296 DAPK1P53355 1430 aa14.07□□□□□ -0.16
PRAMEF1-201ENST00000332296 ABCC5O15440 1437 aa14.06□□□□□ -0.16
PRAMEF1-201ENST00000332296 HSPA5P11021 654 aaKnown RBP14.06□□□□□ -0.16
PRAMEF1-201ENST00000332296 WASHC2AQ641Q2 1341 aa14.06□□□□□ -0.16
PRAMEF1-201ENST00000332296 CROCC2H7BZ55 1655 aa14.05□□□□□ -0.16
PRAMEF1-201ENST00000332296 ABCC1P33527 1531 aa14.05□□□□□ -0.16
PRAMEF1-201ENST00000332296 ARHGEF12Q9NZN5 1544 aa14.05□□□□□ -0.16
PRAMEF1-201ENST00000332296 MBD5Q9P267 1494 aa14.05□□□□□ -0.16
PRAMEF1-201ENST00000332296 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms