RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
TRAIP-201ENST00000331456 ABCC5O15440 1437 aa20.33■□□□□ 0.84
TRAIP-201ENST00000331456 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
TRAIP-201ENST00000331456 ZNF644Q9H582 1327 aaPredicted RBP20.32■□□□□ 0.84
TRAIP-201ENST00000331456 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
TRAIP-201ENST00000331456 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
TRAIP-201ENST00000331456 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
TRAIP-201ENST00000331456 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
TRAIP-201ENST00000331456 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
TRAIP-201ENST00000331456 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
TRAIP-201ENST00000331456 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
TRAIP-201ENST00000331456 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
TRAIP-201ENST00000331456 ADGBQ8N7X0 1667 aa20.23■□□□□ 0.83
TRAIP-201ENST00000331456 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
TRAIP-201ENST00000331456 KDM6BO15054 1643 aa20.21■□□□□ 0.83
TRAIP-201ENST00000331456 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
TRAIP-201ENST00000331456 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
TRAIP-201ENST00000331456 ANKRD30AQ9BXX3 1397 aa20.18■□□□□ 0.82
TRAIP-201ENST00000331456 SHANK2Q9UPX8 1470 aa20.17■□□□□ 0.82
TRAIP-201ENST00000331456 NCOA1Q15788 1441 aa20.17■□□□□ 0.82
TRAIP-201ENST00000331456 KDM5BQ9UGL1 1544 aa20.16■□□□□ 0.82
TRAIP-201ENST00000331456 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
TRAIP-201ENST00000331456 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
TRAIP-201ENST00000331456 ARHGEF5Q12774 1597 aa20.14■□□□□ 0.82
TRAIP-201ENST00000331456 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
TRAIP-201ENST00000331456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.14■□□□□ 0.81
TRAIP-201ENST00000331456 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
TRAIP-201ENST00000331456 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
TRAIP-201ENST00000331456 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
TRAIP-201ENST00000331456 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
TRAIP-201ENST00000331456 RSPH4AQ5TD94 716 aa20.12■□□□□ 0.81
TRAIP-201ENST00000331456 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
TRAIP-201ENST00000331456 C9orf84Q5VXU9 1444 aa20.11■□□□□ 0.81
TRAIP-201ENST00000331456 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
TRAIP-201ENST00000331456 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
TRAIP-201ENST00000331456 ARHGAP5Q13017 1502 aa20.1■□□□□ 0.81
TRAIP-201ENST00000331456 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
TRAIP-201ENST00000331456 DENND4BO75064 1496 aaPredicted RBP20.08■□□□□ 0.81
TRAIP-201ENST00000331456 HNRNPMP52272 730 aaKnown RBP eCLIP20.08■□□□□ 0.8
TRAIP-201ENST00000331456 KCNH8Q96L42 1107 aa20.08■□□□□ 0.8
TRAIP-201ENST00000331456 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.8
TRAIP-201ENST00000331456 MBD5Q9P267 1494 aa20.08■□□□□ 0.8
TRAIP-201ENST00000331456 PLEKHH2Q8IVE3 1493 aa20.07■□□□□ 0.8
TRAIP-201ENST00000331456 ANKRD50Q9ULJ7 1429 aa20.06■□□□□ 0.8
TRAIP-201ENST00000331456 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
TRAIP-201ENST00000331456 KIAA1107Q9UPP5 1409 aa20.03■□□□□ 0.8
TRAIP-201ENST00000331456 PLCH2O75038 1416 aa20.02■□□□□ 0.8
TRAIP-201ENST00000331456 SYCP2Q9BX26 1530 aa20.01■□□□□ 0.79
TRAIP-201ENST00000331456 KIF15Q9NS87 1388 aa20■□□□□ 0.79
TRAIP-201ENST00000331456 EFCAB2Q5VUJ9 269 aa20■□□□□ 0.79
TRAIP-201ENST00000331456 PZPP20742 1482 aa20■□□□□ 0.79
TRAIP-201ENST00000331456 ANKRD30BQ9BXX2 1392 aa19.99■□□□□ 0.79
TRAIP-201ENST00000331456 MAST1Q9Y2H9 1570 aa19.99■□□□□ 0.79
TRAIP-201ENST00000331456 WDR7Q9Y4E6 1490 aa19.99■□□□□ 0.79
TRAIP-201ENST00000331456 ARAP3Q8WWN8 1544 aa19.96■□□□□ 0.79
TRAIP-201ENST00000331456 FOXD1Q16676 465 aa19.96■□□□□ 0.79
TRAIP-201ENST00000331456 RPRD2Q5VT52 1461 aaKnown RBP19.94■□□□□ 0.78
TRAIP-201ENST00000331456 MIER1Q8N108 512 aa19.93■□□□□ 0.78
TRAIP-201ENST00000331456 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
TRAIP-201ENST00000331456 NUP155O75694 1391 aa19.92■□□□□ 0.78
TRAIP-201ENST00000331456 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRAIP-201ENST00000331456 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
TRAIP-201ENST00000331456 ABCC1P33527 1531 aa19.91■□□□□ 0.78
TRAIP-201ENST00000331456 PKD2Q13563 968 aa19.9■□□□□ 0.78
TRAIP-201ENST00000331456 ARHGEF12Q9NZN5 1544 aa19.89■□□□□ 0.77
TRAIP-201ENST00000331456 ASXL2Q76L83 1435 aa19.89■□□□□ 0.77
TRAIP-201ENST00000331456 ABCA9Q8IUA7 1624 aa19.88■□□□□ 0.77
TRAIP-201ENST00000331456 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
TRAIP-201ENST00000331456 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
TRAIP-201ENST00000331456 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
TRAIP-201ENST00000331456 FANCAO15360 1455 aa19.82■□□□□ 0.76
TRAIP-201ENST00000331456 TRAPPC8Q9Y2L5 1435 aa19.82■□□□□ 0.76
TRAIP-201ENST00000331456 UNC13BO14795 1591 aa19.81■□□□□ 0.76
TRAIP-201ENST00000331456 ERBINQ96RT1 1412 aa19.81■□□□□ 0.76
TRAIP-201ENST00000331456 RTEL1-TNFRSF6BF6WH68 1400 aa19.8■□□□□ 0.76
TRAIP-201ENST00000331456 FAM135AQ9P2D6 1515 aa19.8■□□□□ 0.76
TRAIP-201ENST00000331456 CENPBP07199 599 aaPredicted RBP19.8■□□□□ 0.76
TRAIP-201ENST00000331456 SPAG9O60271 1321 aaKnown RBP19.79■□□□□ 0.76
TRAIP-201ENST00000331456 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
TRAIP-201ENST00000331456 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
TRAIP-201ENST00000331456 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
TRAIP-201ENST00000331456 IQGAP3Q86VI3 1631 aa19.74■□□□□ 0.75
TRAIP-201ENST00000331456 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
TRAIP-201ENST00000331456 EIF4G2P78344 907 aaKnown RBP eCLIP19.73■□□□□ 0.75
TRAIP-201ENST00000331456 DDX10Q13206 875 aaKnown RBP19.73■□□□□ 0.75
TRAIP-201ENST00000331456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.75
TRAIP-201ENST00000331456 SCAPERQ9BY12 1400 aa19.72■□□□□ 0.75
TRAIP-201ENST00000331456 MAGI2Q86UL8 1455 aa19.72■□□□□ 0.75
TRAIP-201ENST00000331456 CFAP74Q9C0B2 1584 aa19.71■□□□□ 0.74
TRAIP-201ENST00000331456 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
TRAIP-201ENST00000331456 NBPF8Q3BBV2 869 aa19.7■□□□□ 0.74
TRAIP-201ENST00000331456 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
TRAIP-201ENST00000331456 INO80Q9ULG1 1556 aaPredicted RBP19.69■□□□□ 0.74
TRAIP-201ENST00000331456 CD109Q6YHK3 1445 aa19.69■□□□□ 0.74
TRAIP-201ENST00000331456 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
TRAIP-201ENST00000331456 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
TRAIP-201ENST00000331456 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
TRAIP-201ENST00000331456 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
TRAIP-201ENST00000331456 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
TRAIP-201ENST00000331456 CCDC144AA2RUR9 1427 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 276.8 ms