RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 USP35Q9P2H5 1018 aa18.08■□□□□ 0.49
EPHB3-201ENST00000330394 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
EPHB3-201ENST00000330394 PTMAP06454 111 aaKnown RBP18.08■□□□□ 0.48
EPHB3-201ENST00000330394 DNTTIP2Q5QJE6 756 aaKnown RBP18.08■□□□□ 0.48
EPHB3-201ENST00000330394 ARID3AQ99856 593 aa18.08■□□□□ 0.48
EPHB3-201ENST00000330394 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
EPHB3-201ENST00000330394 FMN1Q68DA7 1419 aa18.07■□□□□ 0.48
EPHB3-201ENST00000330394 HSP90AB1P08238 724 aaKnown RBP18.06■□□□□ 0.48
EPHB3-201ENST00000330394 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
EPHB3-201ENST00000330394 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
EPHB3-201ENST00000330394 KTN1Q86UP2 1357 aaKnown RBP18.05■□□□□ 0.48
EPHB3-201ENST00000330394 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
EPHB3-201ENST00000330394 TMF1P82094 1093 aa18.04■□□□□ 0.48
EPHB3-201ENST00000330394 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
EPHB3-201ENST00000330394 RALBP1Q15311 655 aa18.03■□□□□ 0.48
EPHB3-201ENST00000330394 CRBNQ96SW2 442 aa18.03■□□□□ 0.48
EPHB3-201ENST00000330394 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
EPHB3-201ENST00000330394 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
EPHB3-201ENST00000330394 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
EPHB3-201ENST00000330394 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
EPHB3-201ENST00000330394 HSCBQ8IWL3 235 aa18.01■□□□□ 0.47
EPHB3-201ENST00000330394 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
EPHB3-201ENST00000330394 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
EPHB3-201ENST00000330394 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
EPHB3-201ENST00000330394 PLCB2Q00722 1185 aa18■□□□□ 0.47
EPHB3-201ENST00000330394 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
EPHB3-201ENST00000330394 KIF21BO75037 1637 aa17.98■□□□□ 0.47
EPHB3-201ENST00000330394 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
EPHB3-201ENST00000330394 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
EPHB3-201ENST00000330394 GOLGA6L3A6NEY3 463 aa17.96■□□□□ 0.47
EPHB3-201ENST00000330394 PRKCSHP14314 528 aaPredicted RBP17.96■□□□□ 0.47
EPHB3-201ENST00000330394 NFKBIBQ15653 356 aa17.96■□□□□ 0.47
EPHB3-201ENST00000330394 STAG3Q9UJ98 1225 aa17.96■□□□□ 0.47
EPHB3-201ENST00000330394 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
EPHB3-201ENST00000330394 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
EPHB3-201ENST00000330394 GOLGA2Q08379 1002 aa17.95■□□□□ 0.46
EPHB3-201ENST00000330394 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
EPHB3-201ENST00000330394 VSIG10Q8N0Z9 540 aa17.94■□□□□ 0.46
EPHB3-201ENST00000330394 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
EPHB3-201ENST00000330394 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
EPHB3-201ENST00000330394 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
EPHB3-201ENST00000330394 AKNAQ7Z591 1439 aa17.93■□□□□ 0.46
EPHB3-201ENST00000330394 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
EPHB3-201ENST00000330394 NUP155O75694 1391 aa17.92■□□□□ 0.46
EPHB3-201ENST00000330394 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
EPHB3-201ENST00000330394 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
EPHB3-201ENST00000330394 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
EPHB3-201ENST00000330394 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
EPHB3-201ENST00000330394 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
EPHB3-201ENST00000330394 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
EPHB3-201ENST00000330394 MS4A1P11836 297 aa17.89■□□□□ 0.45
EPHB3-201ENST00000330394 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
EPHB3-201ENST00000330394 BCL2L13Q9BXK5 485 aa17.89■□□□□ 0.45
EPHB3-201ENST00000330394 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
EPHB3-201ENST00000330394 IGF1RP08069 1367 aa17.89■□□□□ 0.45
EPHB3-201ENST00000330394 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
EPHB3-201ENST00000330394 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
EPHB3-201ENST00000330394 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
EPHB3-201ENST00000330394 USP47Q96K76 1375 aa17.86■□□□□ 0.45
EPHB3-201ENST00000330394 PANK3Q9H999 370 aa17.86■□□□□ 0.45
EPHB3-201ENST00000330394 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
EPHB3-201ENST00000330394 APBB1O00213 710 aa17.85■□□□□ 0.45
EPHB3-201ENST00000330394 FRAT2O75474 233 aaPredicted RBP17.85■□□□□ 0.45
EPHB3-201ENST00000330394 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
EPHB3-201ENST00000330394 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
EPHB3-201ENST00000330394 COG6Q9Y2V7 657 aa17.84■□□□□ 0.45
EPHB3-201ENST00000330394 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.45
EPHB3-201ENST00000330394 SKAP1Q86WV1 359 aa17.83■□□□□ 0.45
EPHB3-201ENST00000330394 RWDD1Q9H446 243 aaPredicted RBP17.83■□□□□ 0.45
EPHB3-201ENST00000330394 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.44
EPHB3-201ENST00000330394 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
EPHB3-201ENST00000330394 SAFB2Q14151 953 aaKnown RBP eCLIP17.82■□□□□ 0.44
EPHB3-201ENST00000330394 ITPRIPQ8IWB1 547 aa17.82■□□□□ 0.44
EPHB3-201ENST00000330394 GBP4Q96PP9 640 aa17.81■□□□□ 0.44
EPHB3-201ENST00000330394 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
EPHB3-201ENST00000330394 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
EPHB3-201ENST00000330394 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
EPHB3-201ENST00000330394 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
EPHB3-201ENST00000330394 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
EPHB3-201ENST00000330394 APAF1O14727 1248 aa17.78■□□□□ 0.44
EPHB3-201ENST00000330394 CASC1Q6TDU7 716 aa17.78■□□□□ 0.44
EPHB3-201ENST00000330394 BACH2Q9BYV9 841 aa17.78■□□□□ 0.44
EPHB3-201ENST00000330394 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
EPHB3-201ENST00000330394 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
EPHB3-201ENST00000330394 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.43
EPHB3-201ENST00000330394 UACAQ9BZF9 1416 aa17.77■□□□□ 0.43
EPHB3-201ENST00000330394 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
EPHB3-201ENST00000330394 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
EPHB3-201ENST00000330394 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
EPHB3-201ENST00000330394 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
EPHB3-201ENST00000330394 LRRC9Q6ZRR7 1453 aa17.74■□□□□ 0.43
EPHB3-201ENST00000330394 FGD6Q6ZV73 1430 aa17.74■□□□□ 0.43
EPHB3-201ENST00000330394 C11orf95C9JLR9 678 aaPredicted RBP17.74■□□□□ 0.43
EPHB3-201ENST00000330394 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
EPHB3-201ENST00000330394 ANKRD30AQ9BXX3 1397 aa17.71■□□□□ 0.43
EPHB3-201ENST00000330394 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.42
EPHB3-201ENST00000330394 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.42
EPHB3-201ENST00000330394 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
EPHB3-201ENST00000330394 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
EPHB3-201ENST00000330394 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms