RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 GSE1Q14687 1217 aa20.4■□□□□ 0.86
RGPD6-202ENST00000330331 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
RGPD6-202ENST00000330331 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
RGPD6-202ENST00000330331 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
RGPD6-202ENST00000330331 NUDCQ9Y266 331 aa20.38■□□□□ 0.85
RGPD6-202ENST00000330331 SMG6Q86US8 1419 aaKnown RBP20.38■□□□□ 0.85
RGPD6-202ENST00000330331 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
RGPD6-202ENST00000330331 PDE4AP27815 886 aa20.37■□□□□ 0.85
RGPD6-202ENST00000330331 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.85
RGPD6-202ENST00000330331 IQGAP2Q13576 1575 aa20.35■□□□□ 0.85
RGPD6-202ENST00000330331 PKNOX2Q96KN3 472 aa20.35■□□□□ 0.85
RGPD6-202ENST00000330331 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
RGPD6-202ENST00000330331 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
RGPD6-202ENST00000330331 SAMD9Q5K651 1589 aa20.34■□□□□ 0.85
RGPD6-202ENST00000330331 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
RGPD6-202ENST00000330331 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
RGPD6-202ENST00000330331 NCOA2Q15596 1464 aa20.33■□□□□ 0.84
RGPD6-202ENST00000330331 FBLN2P98095 1184 aa20.31■□□□□ 0.84
RGPD6-202ENST00000330331 KDM5BQ9UGL1 1544 aa20.31■□□□□ 0.84
RGPD6-202ENST00000330331 CCDC18Q5T9S5 1454 aa20.3■□□□□ 0.84
RGPD6-202ENST00000330331 MAP3K1Q13233 1512 aa20.3■□□□□ 0.84
RGPD6-202ENST00000330331 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
RGPD6-202ENST00000330331 BACH2Q9BYV9 841 aa20.29■□□□□ 0.84
RGPD6-202ENST00000330331 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
RGPD6-202ENST00000330331 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
RGPD6-202ENST00000330331 CCDC7Q96M83 1385 aa20.28■□□□□ 0.84
RGPD6-202ENST00000330331 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
RGPD6-202ENST00000330331 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
RGPD6-202ENST00000330331 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
RGPD6-202ENST00000330331 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
RGPD6-202ENST00000330331 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
RGPD6-202ENST00000330331 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
RGPD6-202ENST00000330331 UGGT2Q9NYU1 1516 aa20.23■□□□□ 0.83
RGPD6-202ENST00000330331 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
RGPD6-202ENST00000330331 NUP160Q12769 1436 aa20.22■□□□□ 0.83
RGPD6-202ENST00000330331 NCOA1Q15788 1441 aa20.2■□□□□ 0.82
RGPD6-202ENST00000330331 SKAP1Q86WV1 359 aa20.2■□□□□ 0.82
RGPD6-202ENST00000330331 CHD1O14646 1710 aa20.19■□□□□ 0.82
RGPD6-202ENST00000330331 FYCO1Q9BQS8 1478 aa20.19■□□□□ 0.82
RGPD6-202ENST00000330331 CASKIN1Q8WXD9 1431 aa20.18■□□□□ 0.82
RGPD6-202ENST00000330331 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
RGPD6-202ENST00000330331 FAM43AQ8N2R8 423 aa20.17■□□□□ 0.82
RGPD6-202ENST00000330331 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
RGPD6-202ENST00000330331 DCAF11Q8TEB1 546 aa20.16■□□□□ 0.82
RGPD6-202ENST00000330331 KIF7Q2M1P5 1343 aa20.16■□□□□ 0.82
RGPD6-202ENST00000330331 DISP1Q96F81 1524 aa20.15■□□□□ 0.82
RGPD6-202ENST00000330331 MS4A1P11836 297 aa20.15■□□□□ 0.82
RGPD6-202ENST00000330331 RRP1P56182 461 aaKnown RBP20.14■□□□□ 0.82
RGPD6-202ENST00000330331 L3MBTL2Q969R5 705 aa20.14■□□□□ 0.82
RGPD6-202ENST00000330331 POLR3GLQ9BT43 218 aa20.14■□□□□ 0.82
RGPD6-202ENST00000330331 KIAA0556O60303 1618 aa20.14■□□□□ 0.82
RGPD6-202ENST00000330331 CFAP43Q8NDM7 1665 aa20.14■□□□□ 0.81
RGPD6-202ENST00000330331 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
RGPD6-202ENST00000330331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.12■□□□□ 0.81
RGPD6-202ENST00000330331 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
RGPD6-202ENST00000330331 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
RGPD6-202ENST00000330331 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
RGPD6-202ENST00000330331 LRRIQ1Q96JM4 1722 aa20.1■□□□□ 0.81
RGPD6-202ENST00000330331 NAIPQ13075 1403 aa20.1■□□□□ 0.81
RGPD6-202ENST00000330331 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
RGPD6-202ENST00000330331 VSIG10Q8N0Z9 540 aa20.09■□□□□ 0.81
RGPD6-202ENST00000330331 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
RGPD6-202ENST00000330331 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.8
RGPD6-202ENST00000330331 FOXD1Q16676 465 aa20.07■□□□□ 0.8
RGPD6-202ENST00000330331 NBPF8Q3BBV2 869 aa20.07■□□□□ 0.8
RGPD6-202ENST00000330331 ZMYND15Q9H091 742 aa20.06■□□□□ 0.8
RGPD6-202ENST00000330331 GLIPR1L2Q4G1C9 344 aa20.05■□□□□ 0.8
RGPD6-202ENST00000330331 PNISRQ8TF01 805 aaKnown RBP20.04■□□□□ 0.8
RGPD6-202ENST00000330331 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
RGPD6-202ENST00000330331 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
RGPD6-202ENST00000330331 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
RGPD6-202ENST00000330331 RRAGDQ9NQL2 400 aaPredicted RBP20.03■□□□□ 0.8
RGPD6-202ENST00000330331 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.8
RGPD6-202ENST00000330331 HECW1Q76N89 1606 aa20.02■□□□□ 0.8
RGPD6-202ENST00000330331 DHX29Q7Z478 1369 aaKnown RBP20.01■□□□□ 0.79
RGPD6-202ENST00000330331 PLIN1O60240 522 aa19.99■□□□□ 0.79
RGPD6-202ENST00000330331 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
RGPD6-202ENST00000330331 RAPGEF6Q8TEU7 1601 aa19.95■□□□□ 0.78
RGPD6-202ENST00000330331 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
RGPD6-202ENST00000330331 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
RGPD6-202ENST00000330331 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
RGPD6-202ENST00000330331 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
RGPD6-202ENST00000330331 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
RGPD6-202ENST00000330331 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
RGPD6-202ENST00000330331 CRBNQ96SW2 442 aa19.93■□□□□ 0.78
RGPD6-202ENST00000330331 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
RGPD6-202ENST00000330331 NAP1L5Q96NT1 182 aaPredicted RBP19.92■□□□□ 0.78
RGPD6-202ENST00000330331 POGKQ9P215 609 aa19.92■□□□□ 0.78
RGPD6-202ENST00000330331 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
RGPD6-202ENST00000330331 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
RGPD6-202ENST00000330331 PLB1Q6P1J6 1458 aa19.91■□□□□ 0.78
RGPD6-202ENST00000330331 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
RGPD6-202ENST00000330331 MAGI3Q5TCQ9 1506 aa19.9■□□□□ 0.78
RGPD6-202ENST00000330331 CDCA7LQ96GN5 454 aa19.89■□□□□ 0.77
RGPD6-202ENST00000330331 ARXQ96QS3 562 aa19.89■□□□□ 0.77
RGPD6-202ENST00000330331 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
RGPD6-202ENST00000330331 HSP90AA2PQ14568 343 aaPredicted RBP19.88■□□□□ 0.77
RGPD6-202ENST00000330331 SUPT6HQ7KZ85 1726 aaKnown RBP19.86■□□□□ 0.77
RGPD6-202ENST00000330331 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
RGPD6-202ENST00000330331 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms