RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
BRCC3-201ENST00000330045 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
BRCC3-201ENST00000330045 DENND4BO75064 1496 aaPredicted RBP21.6■■□□□ 1.05
BRCC3-201ENST00000330045 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
BRCC3-201ENST00000330045 FKBP8Q14318 412 aa21.56■■□□□ 1.04
BRCC3-201ENST00000330045 KDM6BO15054 1643 aa21.56■■□□□ 1.04
BRCC3-201ENST00000330045 ABCA8O94911 1581 aa21.56■■□□□ 1.04
BRCC3-201ENST00000330045 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
BRCC3-201ENST00000330045 PTPRGP23470 1445 aa21.55■■□□□ 1.04
BRCC3-201ENST00000330045 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
BRCC3-201ENST00000330045 BCANQ96GW7 911 aa21.52■■□□□ 1.04
BRCC3-201ENST00000330045 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
BRCC3-201ENST00000330045 ATP10BO94823 1461 aa21.51■■□□□ 1.03
BRCC3-201ENST00000330045 KIF14Q15058 1648 aa21.5■■□□□ 1.03
BRCC3-201ENST00000330045 TROQ12816 1431 aaPredicted RBP21.49■■□□□ 1.03
BRCC3-201ENST00000330045 NEFLP07196 543 aa21.49■■□□□ 1.03
BRCC3-201ENST00000330045 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
BRCC3-201ENST00000330045 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
BRCC3-201ENST00000330045 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
BRCC3-201ENST00000330045 HSPA5P11021 654 aaKnown RBP21.47■■□□□ 1.03
BRCC3-201ENST00000330045 ROCK1Q13464 1354 aa21.45■■□□□ 1.02
BRCC3-201ENST00000330045 DNMT1P26358 1616 aaKnown RBP21.45■■□□□ 1.02
BRCC3-201ENST00000330045 DAPK1P53355 1430 aa21.44■■□□□ 1.02
BRCC3-201ENST00000330045 WASHC2AQ641Q2 1341 aa21.43■■□□□ 1.02
BRCC3-201ENST00000330045 EIF4G2P78344 907 aaKnown RBP eCLIP21.43■■□□□ 1.02
BRCC3-201ENST00000330045 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
BRCC3-201ENST00000330045 ABCC5O15440 1437 aa21.4■■□□□ 1.02
BRCC3-201ENST00000330045 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.02
BRCC3-201ENST00000330045 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.01
BRCC3-201ENST00000330045 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
BRCC3-201ENST00000330045 FOXD1Q16676 465 aa21.38■■□□□ 1.01
BRCC3-201ENST00000330045 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
BRCC3-201ENST00000330045 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
BRCC3-201ENST00000330045 RPRD2Q5VT52 1461 aaKnown RBP21.36■■□□□ 1.01
BRCC3-201ENST00000330045 ADCY10Q96PN6 1610 aa21.35■■□□□ 1.01
BRCC3-201ENST00000330045 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
BRCC3-201ENST00000330045 TEX14Q8IWB6 1497 aa21.33■■□□□ 1.01
BRCC3-201ENST00000330045 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
BRCC3-201ENST00000330045 ABCC10Q5T3U5 1492 aa21.32■■□□□ 1
BRCC3-201ENST00000330045 CAMSAP2Q08AD1 1489 aa21.31■■□□□ 1
BRCC3-201ENST00000330045 ABCC2Q92887 1545 aa21.3■■□□□ 1
BRCC3-201ENST00000330045 NCOA1Q15788 1441 aa21.29■■□□□ 1
BRCC3-201ENST00000330045 ITSN2Q9NZM3 1697 aa21.29■■□□□ 1
BRCC3-201ENST00000330045 SLC4A1APQ9BWU0 796 aaKnown RBP21.28■■□□□ 1
BRCC3-201ENST00000330045 CDC42BPAQ5VT25 1732 aa21.28■■□□□ 1
BRCC3-201ENST00000330045 CCDC7Q96M83 1385 aa21.27■■□□□ 1
BRCC3-201ENST00000330045 C11orf95C9JLR9 678 aaPredicted RBP21.27■■□□□ 1
BRCC3-201ENST00000330045 NBPF8Q3BBV2 869 aa21.27■■□□□ 1
BRCC3-201ENST00000330045 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
BRCC3-201ENST00000330045 PZPP20742 1482 aa21.24■□□□□ 0.99
BRCC3-201ENST00000330045 POLR1AO95602 1720 aaPredicted RBP21.23■□□□□ 0.99
BRCC3-201ENST00000330045 CROCC2H7BZ55 1655 aa21.23■□□□□ 0.99
BRCC3-201ENST00000330045 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
BRCC3-201ENST00000330045 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
BRCC3-201ENST00000330045 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
BRCC3-201ENST00000330045 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
BRCC3-201ENST00000330045 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
BRCC3-201ENST00000330045 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
BRCC3-201ENST00000330045 ZCCHC11Q5TAX3 1644 aaKnown RBP21.2■□□□□ 0.98
BRCC3-201ENST00000330045 HNRNPMP52272 730 aaKnown RBP eCLIP21.18■□□□□ 0.98
BRCC3-201ENST00000330045 RBM19Q9Y4C8 960 aaKnown RBP21.17■□□□□ 0.98
BRCC3-201ENST00000330045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.17■□□□□ 0.98
BRCC3-201ENST00000330045 ANP32EQ9BTT0 268 aa21.16■□□□□ 0.98
BRCC3-201ENST00000330045 MBD5Q9P267 1494 aa21.16■□□□□ 0.98
BRCC3-201ENST00000330045 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
BRCC3-201ENST00000330045 CDC42BPBQ9Y5S2 1711 aa21.16■□□□□ 0.98
BRCC3-201ENST00000330045 UHRF1BP1LA0JNW5 1464 aa21.14■□□□□ 0.98
BRCC3-201ENST00000330045 KIAA1107Q9UPP5 1409 aa21.14■□□□□ 0.97
BRCC3-201ENST00000330045 MRS2Q9HD23 443 aa21.14■□□□□ 0.97
BRCC3-201ENST00000330045 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
BRCC3-201ENST00000330045 SAMD9LQ8IVG5 1584 aa21.12■□□□□ 0.97
BRCC3-201ENST00000330045 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
BRCC3-201ENST00000330045 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
BRCC3-201ENST00000330045 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
BRCC3-201ENST00000330045 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
BRCC3-201ENST00000330045 SHANK2Q9UPX8 1470 aa21.08■□□□□ 0.97
BRCC3-201ENST00000330045 ARHGAP5Q13017 1502 aa21.08■□□□□ 0.96
BRCC3-201ENST00000330045 PKD2Q13563 968 aa21.07■□□□□ 0.96
BRCC3-201ENST00000330045 ZBED9Q6R2W3 1325 aa21.07■□□□□ 0.96
BRCC3-201ENST00000330045 ANKRD50Q9ULJ7 1429 aa21.06■□□□□ 0.96
BRCC3-201ENST00000330045 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
BRCC3-201ENST00000330045 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
BRCC3-201ENST00000330045 USP47Q96K76 1375 aa21.02■□□□□ 0.96
BRCC3-201ENST00000330045 BCORL1Q5H9F3 1711 aa21.02■□□□□ 0.96
BRCC3-201ENST00000330045 KDM5CP41229 1560 aa21.01■□□□□ 0.95
BRCC3-201ENST00000330045 KDM5DQ9BY66 1539 aa21.01■□□□□ 0.95
BRCC3-201ENST00000330045 TSPY4P0CV99 314 aa21.01■□□□□ 0.95
BRCC3-201ENST00000330045 TSPY10P0CW01 314 aa21.01■□□□□ 0.95
BRCC3-201ENST00000330045 ZNF326Q5BKZ1 582 aaKnown RBP21.01■□□□□ 0.95
BRCC3-201ENST00000330045 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
BRCC3-201ENST00000330045 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
BRCC3-201ENST00000330045 PPP4R2Q9NY27 417 aa21■□□□□ 0.95
BRCC3-201ENST00000330045 UHRF1BP1Q6BDS2 1440 aa21■□□□□ 0.95
BRCC3-201ENST00000330045 DHX29Q7Z478 1369 aaKnown RBP20.99■□□□□ 0.95
BRCC3-201ENST00000330045 CCDC141Q6ZP82 1450 aa20.98■□□□□ 0.95
BRCC3-201ENST00000330045 PLCH2O75038 1416 aa20.98■□□□□ 0.95
BRCC3-201ENST00000330045 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
BRCC3-201ENST00000330045 ARID4BQ4LE39 1312 aaPredicted RBP20.97■□□□□ 0.95
BRCC3-201ENST00000330045 ARHGEF5Q12774 1597 aa20.97■□□□□ 0.95
BRCC3-201ENST00000330045 NUP155O75694 1391 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms