RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 KDM5BQ9UGL1 1544 aa29.81■■■□□ 2.36
RIPPLY3-201ENST00000329553 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
RIPPLY3-201ENST00000329553 ZCCHC11Q5TAX3 1644 aaKnown RBP29.8■■■□□ 2.36
RIPPLY3-201ENST00000329553 AKNAQ7Z591 1439 aa29.76■■■□□ 2.36
RIPPLY3-201ENST00000329553 MAPKBP1O60336 1514 aa29.76■■■□□ 2.35
RIPPLY3-201ENST00000329553 KCNH8Q96L42 1107 aa29.72■■■□□ 2.35
RIPPLY3-201ENST00000329553 GCC2Q8IWJ2 1684 aa29.72■■■□□ 2.35
RIPPLY3-201ENST00000329553 ROCK1Q13464 1354 aa29.71■■■□□ 2.35
RIPPLY3-201ENST00000329553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.7■■■□□ 2.35
RIPPLY3-201ENST00000329553 TTC37Q6PGP7 1564 aa29.68■■■□□ 2.34
RIPPLY3-201ENST00000329553 CDC42BPBQ9Y5S2 1711 aa29.67■■■□□ 2.34
RIPPLY3-201ENST00000329553 PREX2Q70Z35 1606 aa29.66■■■□□ 2.34
RIPPLY3-201ENST00000329553 KDM6BO15054 1643 aa29.64■■■□□ 2.34
RIPPLY3-201ENST00000329553 HNRNPMP52272 730 aaKnown RBP eCLIP29.6■■■□□ 2.33
RIPPLY3-201ENST00000329553 CROCC2H7BZ55 1655 aa29.6■■■□□ 2.33
RIPPLY3-201ENST00000329553 SAMD9LQ8IVG5 1584 aa29.59■■■□□ 2.33
RIPPLY3-201ENST00000329553 NCOA1Q15788 1441 aa29.58■■■□□ 2.33
RIPPLY3-201ENST00000329553 MYO5CQ9NQX4 1742 aa29.56■■■□□ 2.32
RIPPLY3-201ENST00000329553 ARHGAP5Q13017 1502 aa29.56■■■□□ 2.32
RIPPLY3-201ENST00000329553 SIN3AQ96ST3 1273 aa29.56■■■□□ 2.32
RIPPLY3-201ENST00000329553 ADGRL2O95490 1459 aa29.56■■■□□ 2.32
RIPPLY3-201ENST00000329553 MBD5Q9P267 1494 aa29.56■■■□□ 2.32
RIPPLY3-201ENST00000329553 ADGBQ8N7X0 1667 aa29.55■■■□□ 2.32
RIPPLY3-201ENST00000329553 TRIM52Q96A61 297 aa29.55■■■□□ 2.32
RIPPLY3-201ENST00000329553 WDR7Q9Y4E6 1490 aa29.53■■■□□ 2.32
RIPPLY3-201ENST00000329553 ARHGEF5Q12774 1597 aa29.52■■■□□ 2.32
RIPPLY3-201ENST00000329553 PLCH2O75038 1416 aa29.52■■■□□ 2.32
RIPPLY3-201ENST00000329553 ANKRD30AQ9BXX3 1397 aa29.51■■■□□ 2.31
RIPPLY3-201ENST00000329553 TSPY4P0CV99 314 aa29.51■■■□□ 2.31
RIPPLY3-201ENST00000329553 TSPY10P0CW01 314 aa29.51■■■□□ 2.31
RIPPLY3-201ENST00000329553 SHANK2Q9UPX8 1470 aa29.51■■■□□ 2.31
RIPPLY3-201ENST00000329553 C9orf84Q5VXU9 1444 aa29.5■■■□□ 2.31
RIPPLY3-201ENST00000329553 NEUROD1Q13562 356 aa29.49■■■□□ 2.31
RIPPLY3-201ENST00000329553 RSPH4AQ5TD94 716 aa29.48■■■□□ 2.31
RIPPLY3-201ENST00000329553 ASXL2Q76L83 1435 aa29.47■■■□□ 2.31
RIPPLY3-201ENST00000329553 NPM1P06748 294 aaKnown RBP eCLIP29.46■■■□□ 2.31
RIPPLY3-201ENST00000329553 CCDC141Q6ZP82 1450 aa29.46■■■□□ 2.31
RIPPLY3-201ENST00000329553 ACIN1Q9UKV3 1341 aaKnown RBP29.45■■■□□ 2.31
RIPPLY3-201ENST00000329553 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.3
RIPPLY3-201ENST00000329553 EFCAB2Q5VUJ9 269 aa29.44■■■□□ 2.3
RIPPLY3-201ENST00000329553 DENND4BO75064 1496 aaPredicted RBP29.43■■■□□ 2.3
RIPPLY3-201ENST00000329553 MPHOSPH9Q99550 1183 aa29.43■■■□□ 2.3
RIPPLY3-201ENST00000329553 DIEXFQ68CQ4 756 aaKnown RBP29.43■■■□□ 2.3
RIPPLY3-201ENST00000329553 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
RIPPLY3-201ENST00000329553 PLEKHH2Q8IVE3 1493 aa29.41■■■□□ 2.3
RIPPLY3-201ENST00000329553 ZNF316A6NFI3 1004 aaPredicted RBP29.41■■■□□ 2.3
RIPPLY3-201ENST00000329553 ANKRD50Q9ULJ7 1429 aa29.38■■■□□ 2.29
RIPPLY3-201ENST00000329553 SCAF1Q9H7N4 1312 aaKnown RBP29.38■■■□□ 2.29
RIPPLY3-201ENST00000329553 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
RIPPLY3-201ENST00000329553 TIMELESSQ9UNS1 1208 aa29.36■■■□□ 2.29
RIPPLY3-201ENST00000329553 ABCA9Q8IUA7 1624 aa29.36■■■□□ 2.29
RIPPLY3-201ENST00000329553 ARAP3Q8WWN8 1544 aa29.35■■■□□ 2.29
RIPPLY3-201ENST00000329553 KIF15Q9NS87 1388 aa29.34■■■□□ 2.29
RIPPLY3-201ENST00000329553 MAST1Q9Y2H9 1570 aa29.31■■■□□ 2.28
RIPPLY3-201ENST00000329553 ABCC1P33527 1531 aa29.31■■■□□ 2.28
RIPPLY3-201ENST00000329553 SLC4A1APQ9BWU0 796 aaKnown RBP29.3■■■□□ 2.28
RIPPLY3-201ENST00000329553 CYB5RLQ6IPT4 315 aa29.29■■■□□ 2.28
RIPPLY3-201ENST00000329553 FOXD1Q16676 465 aa29.29■■■□□ 2.28
RIPPLY3-201ENST00000329553 PZPP20742 1482 aa29.27■■■□□ 2.28
RIPPLY3-201ENST00000329553 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
RIPPLY3-201ENST00000329553 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
RIPPLY3-201ENST00000329553 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
RIPPLY3-201ENST00000329553 TRAPPC8Q9Y2L5 1435 aa29.26■■■□□ 2.27
RIPPLY3-201ENST00000329553 FANCAO15360 1455 aa29.25■■■□□ 2.27
RIPPLY3-201ENST00000329553 PPP1R15AO75807 674 aaPredicted RBP29.23■■■□□ 2.27
RIPPLY3-201ENST00000329553 TONSLQ96HA7 1378 aa29.23■■■□□ 2.27
RIPPLY3-201ENST00000329553 ANKRD30BQ9BXX2 1392 aa29.2■■■□□ 2.27
RIPPLY3-201ENST00000329553 AFAP1Q8N556 730 aa29.19■■■□□ 2.26
RIPPLY3-201ENST00000329553 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
RIPPLY3-201ENST00000329553 NUP155O75694 1391 aa29.18■■■□□ 2.26
RIPPLY3-201ENST00000329553 CD109Q6YHK3 1445 aa29.14■■■□□ 2.25
RIPPLY3-201ENST00000329553 PKD2Q13563 968 aa29.13■■■□□ 2.25
RIPPLY3-201ENST00000329553 SPAG9O60271 1321 aaKnown RBP29.13■■■□□ 2.25
RIPPLY3-201ENST00000329553 KDM5DQ9BY66 1539 aa29.12■■■□□ 2.25
RIPPLY3-201ENST00000329553 SCAPERQ9BY12 1400 aa29.12■■■□□ 2.25
RIPPLY3-201ENST00000329553 ADGRL1O94910 1474 aa29.12■■■□□ 2.25
RIPPLY3-201ENST00000329553 DUOX2Q9NRD8 1548 aa29.1■■■□□ 2.25
RIPPLY3-201ENST00000329553 RTEL1-TNFRSF6BF6WH68 1400 aa29.1■■■□□ 2.25
RIPPLY3-201ENST00000329553 RPRD2Q5VT52 1461 aaKnown RBP29.06■■■□□ 2.24
RIPPLY3-201ENST00000329553 ZFYVE16Q7Z3T8 1539 aa29.05■■■□□ 2.24
RIPPLY3-201ENST00000329553 ERBINQ96RT1 1412 aa29.04■■■□□ 2.24
RIPPLY3-201ENST00000329553 CENPBP07199 599 aaPredicted RBP29.02■■■□□ 2.24
RIPPLY3-201ENST00000329553 UNC13BO14795 1591 aa29.01■■■□□ 2.23
RIPPLY3-201ENST00000329553 L3MBTL2Q969R5 705 aa29.01■■■□□ 2.23
RIPPLY3-201ENST00000329553 FAM135AQ9P2D6 1515 aa29■■■□□ 2.23
RIPPLY3-201ENST00000329553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.23
RIPPLY3-201ENST00000329553 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
RIPPLY3-201ENST00000329553 INO80Q9ULG1 1556 aaPredicted RBP28.98■■■□□ 2.23
RIPPLY3-201ENST00000329553 CFAP74Q9C0B2 1584 aa28.98■■■□□ 2.23
RIPPLY3-201ENST00000329553 MYT1LQ9UL68 1186 aa28.96■■■□□ 2.23
RIPPLY3-201ENST00000329553 ZNF518AQ6AHZ1 1483 aa28.93■■■□□ 2.22
RIPPLY3-201ENST00000329553 MAGI2Q86UL8 1455 aa28.92■■■□□ 2.22
RIPPLY3-201ENST00000329553 TEX14Q8IWB6 1497 aa28.91■■■□□ 2.22
RIPPLY3-201ENST00000329553 IQGAP3Q86VI3 1631 aa28.91■■■□□ 2.22
RIPPLY3-201ENST00000329553 MAP3K4Q9Y6R4 1608 aa28.91■■■□□ 2.22
RIPPLY3-201ENST00000329553 GLI2P10070 1586 aa28.9■■■□□ 2.22
RIPPLY3-201ENST00000329553 NEO1Q92859 1461 aa28.9■■■□□ 2.22
RIPPLY3-201ENST00000329553 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.21
RIPPLY3-201ENST00000329553 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
RIPPLY3-201ENST00000329553 FAM69CQ0P6D2 419 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms