RNA–Protein interactions for RNA: ENST00000329474.6

CARMIL1-201, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARMIL1, Length 5,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-201ENST00000329474 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
CARMIL1-201ENST00000329474 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
CARMIL1-201ENST00000329474 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
CARMIL1-201ENST00000329474 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
CARMIL1-201ENST00000329474 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
CARMIL1-201ENST00000329474 MYOM3Q5VTT5 1437 aa13.23□□□□□ -0.29
CARMIL1-201ENST00000329474 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
CARMIL1-201ENST00000329474 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
CARMIL1-201ENST00000329474 KNSTRNQ9Y448 316 aa13.22□□□□□ -0.29
CARMIL1-201ENST00000329474 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
CARMIL1-201ENST00000329474 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
CARMIL1-201ENST00000329474 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.3
CARMIL1-201ENST00000329474 C14orf37Q86TY3 774 aa13.21□□□□□ -0.3
CARMIL1-201ENST00000329474 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
CARMIL1-201ENST00000329474 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
CARMIL1-201ENST00000329474 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
CARMIL1-201ENST00000329474 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
CARMIL1-201ENST00000329474 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
CARMIL1-201ENST00000329474 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
CARMIL1-201ENST00000329474 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
CARMIL1-201ENST00000329474 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
CARMIL1-201ENST00000329474 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
CARMIL1-201ENST00000329474 RBM19Q9Y4C8 960 aaKnown RBP13.16□□□□□ -0.3
CARMIL1-201ENST00000329474 GGT6Q6P531 493 aa13.14□□□□□ -0.31
CARMIL1-201ENST00000329474 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
CARMIL1-201ENST00000329474 TMF1P82094 1093 aa13.14□□□□□ -0.31
CARMIL1-201ENST00000329474 ARXQ96QS3 562 aa13.14□□□□□ -0.31
CARMIL1-201ENST00000329474 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
CARMIL1-201ENST00000329474 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
CARMIL1-201ENST00000329474 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
CARMIL1-201ENST00000329474 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
CARMIL1-201ENST00000329474 MLECQ14165 292 aa13.12□□□□□ -0.31
CARMIL1-201ENST00000329474 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
CARMIL1-201ENST00000329474 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
CARMIL1-201ENST00000329474 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
CARMIL1-201ENST00000329474 USP47Q96K76 1375 aa13.1□□□□□ -0.31
CARMIL1-201ENST00000329474 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
CARMIL1-201ENST00000329474 URB2Q14146 1524 aaKnown RBP13.1□□□□□ -0.31
CARMIL1-201ENST00000329474 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
CARMIL1-201ENST00000329474 STK26Q9P289 416 aa13.1□□□□□ -0.31
CARMIL1-201ENST00000329474 PRG4Q92954 1404 aaPredicted RBP13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 EHBP1L1Q8N3D4 1523 aa13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 RGS3P49796 1198 aa13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
CARMIL1-201ENST00000329474 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.31
CARMIL1-201ENST00000329474 PTPRGP23470 1445 aa13.08□□□□□ -0.32
CARMIL1-201ENST00000329474 KIF3BO15066 747 aa13.08□□□□□ -0.32
CARMIL1-201ENST00000329474 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
CARMIL1-201ENST00000329474 GLIPR1L2Q4G1C9 344 aa13.07□□□□□ -0.32
CARMIL1-201ENST00000329474 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
CARMIL1-201ENST00000329474 SUPT6HQ7KZ85 1726 aaKnown RBP13.07□□□□□ -0.32
CARMIL1-201ENST00000329474 KANK1Q14678 1352 aa13.07□□□□□ -0.32
CARMIL1-201ENST00000329474 HSP90AA1P07900 732 aaKnown RBP13.06□□□□□ -0.32
CARMIL1-201ENST00000329474 KIF7Q2M1P5 1343 aa13.06□□□□□ -0.32
CARMIL1-201ENST00000329474 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
CARMIL1-201ENST00000329474 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
CARMIL1-201ENST00000329474 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
CARMIL1-201ENST00000329474 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
CARMIL1-201ENST00000329474 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
CARMIL1-201ENST00000329474 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
CARMIL1-201ENST00000329474 POGKQ9P215 609 aa13.03□□□□□ -0.32
CARMIL1-201ENST00000329474 CUL7Q14999 1698 aa13.03□□□□□ -0.32
CARMIL1-201ENST00000329474 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
CARMIL1-201ENST00000329474 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
CARMIL1-201ENST00000329474 SPAG9O60271 1321 aaKnown RBP13.03□□□□□ -0.32
CARMIL1-201ENST00000329474 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.33
CARMIL1-201ENST00000329474 PANK3Q9H999 370 aa13.02□□□□□ -0.33
CARMIL1-201ENST00000329474 HFM1A2PYH4 1435 aa13.01□□□□□ -0.33
CARMIL1-201ENST00000329474 EPRSP07814 1512 aaKnown RBP13.01□□□□□ -0.33
CARMIL1-201ENST00000329474 PLIN1O60240 522 aa13.01□□□□□ -0.33
CARMIL1-201ENST00000329474 SOX12O15370 315 aa13.01□□□□□ -0.33
CARMIL1-201ENST00000329474 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
CARMIL1-201ENST00000329474 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
CARMIL1-201ENST00000329474 CFAP53Q96M91 514 aa13□□□□□ -0.33
CARMIL1-201ENST00000329474 NUDCQ9Y266 331 aa13□□□□□ -0.33
CARMIL1-201ENST00000329474 RCAN3Q9UKA8 241 aa13□□□□□ -0.33
CARMIL1-201ENST00000329474 IQGAP2Q13576 1575 aa13□□□□□ -0.33
CARMIL1-201ENST00000329474 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
CARMIL1-201ENST00000329474 NAIPQ13075 1403 aa13□□□□□ -0.33
CARMIL1-201ENST00000329474 DAPK1P53355 1430 aa12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 MAPKBP1O60336 1514 aa12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
CARMIL1-201ENST00000329474 ANP32BQ92688 251 aaKnown RBP12.98□□□□□ -0.33
CARMIL1-201ENST00000329474 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
CARMIL1-201ENST00000329474 RALBP1Q15311 655 aa12.98□□□□□ -0.33
CARMIL1-201ENST00000329474 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
CARMIL1-201ENST00000329474 ARHGAP5Q13017 1502 aa12.97□□□□□ -0.33
CARMIL1-201ENST00000329474 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
CARMIL1-201ENST00000329474 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.33
CARMIL1-201ENST00000329474 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
CARMIL1-201ENST00000329474 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
CARMIL1-201ENST00000329474 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms