RNA–Protein interactions for RNA: ENST00000329255.3

ALX4-201, Transcript of ALX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX4, Length 5,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4-201ENST00000329255 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
ALX4-201ENST00000329255 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.34
ALX4-201ENST00000329255 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
ALX4-201ENST00000329255 TNNT3P45378 269 aaPredicted RBP17.19■□□□□ 0.34
ALX4-201ENST00000329255 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
ALX4-201ENST00000329255 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
ALX4-201ENST00000329255 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
ALX4-201ENST00000329255 KTN1Q86UP2 1357 aaKnown RBP17.17■□□□□ 0.34
ALX4-201ENST00000329255 GZF1Q9H116 711 aaPredicted RBP17.17■□□□□ 0.34
ALX4-201ENST00000329255 TPM4P67936 248 aa17.17■□□□□ 0.34
ALX4-201ENST00000329255 KANK1Q14678 1352 aa17.16■□□□□ 0.34
ALX4-201ENST00000329255 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
ALX4-201ENST00000329255 SRPK2P78362 688 aaKnown RBP17.16■□□□□ 0.34
ALX4-201ENST00000329255 NOC3LQ8WTT2 800 aaKnown RBP17.16■□□□□ 0.34
ALX4-201ENST00000329255 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
ALX4-201ENST00000329255 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
ALX4-201ENST00000329255 RCAN3Q9UKA8 241 aa17.15■□□□□ 0.34
ALX4-201ENST00000329255 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
ALX4-201ENST00000329255 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
ALX4-201ENST00000329255 APBB1O00213 710 aa17.14■□□□□ 0.33
ALX4-201ENST00000329255 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
ALX4-201ENST00000329255 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
ALX4-201ENST00000329255 ARID3AQ99856 593 aa17.12■□□□□ 0.33
ALX4-201ENST00000329255 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
ALX4-201ENST00000329255 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
ALX4-201ENST00000329255 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
ALX4-201ENST00000329255 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
ALX4-201ENST00000329255 GOLGA6L1Q8N7Z2 621 aa17.1■□□□□ 0.33
ALX4-201ENST00000329255 CCDC34Q96HJ3 373 aa17.1■□□□□ 0.33
ALX4-201ENST00000329255 SOX12O15370 315 aa17.09■□□□□ 0.33
ALX4-201ENST00000329255 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
ALX4-201ENST00000329255 RALBP1Q15311 655 aa17.08■□□□□ 0.33
ALX4-201ENST00000329255 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.33
ALX4-201ENST00000329255 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
ALX4-201ENST00000329255 RB1CC1Q8TDY2 1594 aa17.08■□□□□ 0.32
ALX4-201ENST00000329255 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.32
ALX4-201ENST00000329255 MFAP1P55081 439 aaKnown RBP17.06■□□□□ 0.32
ALX4-201ENST00000329255 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
ALX4-201ENST00000329255 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
ALX4-201ENST00000329255 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
ALX4-201ENST00000329255 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
ALX4-201ENST00000329255 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
ALX4-201ENST00000329255 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
ALX4-201ENST00000329255 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
ALX4-201ENST00000329255 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
ALX4-201ENST00000329255 PHF14O94880 888 aa17.02■□□□□ 0.32
ALX4-201ENST00000329255 SAFB2Q14151 953 aaKnown RBP eCLIP17.02■□□□□ 0.32
ALX4-201ENST00000329255 HMMRO75330 724 aa17.01■□□□□ 0.31
ALX4-201ENST00000329255 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
ALX4-201ENST00000329255 STK31Q9BXU1 1019 aa17■□□□□ 0.31
ALX4-201ENST00000329255 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
ALX4-201ENST00000329255 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
ALX4-201ENST00000329255 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
ALX4-201ENST00000329255 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
ALX4-201ENST00000329255 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
ALX4-201ENST00000329255 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
ALX4-201ENST00000329255 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
ALX4-201ENST00000329255 TPM3P06753 285 aa16.97■□□□□ 0.31
ALX4-201ENST00000329255 HSP90AA2PQ14568 343 aaPredicted RBP16.97■□□□□ 0.31
ALX4-201ENST00000329255 PKD2Q13563 968 aa16.97■□□□□ 0.31
ALX4-201ENST00000329255 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
ALX4-201ENST00000329255 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
ALX4-201ENST00000329255 ST18O60284 1047 aa16.96■□□□□ 0.31
ALX4-201ENST00000329255 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.3
ALX4-201ENST00000329255 RASSF8Q8NHQ8 419 aa16.95■□□□□ 0.3
ALX4-201ENST00000329255 STK26Q9P289 416 aa16.94■□□□□ 0.3
ALX4-201ENST00000329255 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
ALX4-201ENST00000329255 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
ALX4-201ENST00000329255 EIF3AQ14152 1382 aaKnown RBP16.93■□□□□ 0.3
ALX4-201ENST00000329255 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
ALX4-201ENST00000329255 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
ALX4-201ENST00000329255 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
ALX4-201ENST00000329255 ZNF330Q9Y3S2 320 aaPredicted RBP16.92■□□□□ 0.3
ALX4-201ENST00000329255 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
ALX4-201ENST00000329255 NOL8Q76FK4 1167 aaKnown RBP16.91■□□□□ 0.3
ALX4-201ENST00000329255 TAF7LQ5H9L4 462 aa16.91■□□□□ 0.3
ALX4-201ENST00000329255 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
ALX4-201ENST00000329255 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
ALX4-201ENST00000329255 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
ALX4-201ENST00000329255 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.3
ALX4-201ENST00000329255 CREBRFQ8IUR6 639 aa16.89■□□□□ 0.29
ALX4-201ENST00000329255 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
ALX4-201ENST00000329255 MLECQ14165 292 aa16.89■□□□□ 0.29
ALX4-201ENST00000329255 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
ALX4-201ENST00000329255 LMOD3Q0VAK6 560 aa16.88■□□□□ 0.29
ALX4-201ENST00000329255 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
ALX4-201ENST00000329255 CLUAP1Q96AJ1 413 aa16.87■□□□□ 0.29
ALX4-201ENST00000329255 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
ALX4-201ENST00000329255 PRM3Q9NNZ6 103 aa16.87■□□□□ 0.29
ALX4-201ENST00000329255 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
ALX4-201ENST00000329255 PDE4CQ08493 712 aa16.87■□□□□ 0.29
ALX4-201ENST00000329255 NLRP13Q86W25 1043 aa16.87■□□□□ 0.29
ALX4-201ENST00000329255 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
ALX4-201ENST00000329255 FOXD1Q16676 465 aa16.86■□□□□ 0.29
ALX4-201ENST00000329255 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
ALX4-201ENST00000329255 GGT6Q6P531 493 aa16.86■□□□□ 0.29
ALX4-201ENST00000329255 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
ALX4-201ENST00000329255 VPS8Q8N3P4 1428 aa16.85■□□□□ 0.29
ALX4-201ENST00000329255 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
ALX4-201ENST00000329255 ATP6V1DQ9Y5K8 247 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms