RNA–Protein interactions for RNA: ENST00000329082.11

RGMA-201, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RGMA, Length 11,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-201ENST00000329082 NPHP1O15259 732 aa13.22□□□□□ -0.29
RGMA-201ENST00000329082 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
RGMA-201ENST00000329082 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
RGMA-201ENST00000329082 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
RGMA-201ENST00000329082 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
RGMA-201ENST00000329082 CC2D1BQ5T0F9 858 aaKnown RBP13.21□□□□□ -0.3
RGMA-201ENST00000329082 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
RGMA-201ENST00000329082 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
RGMA-201ENST00000329082 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
RGMA-201ENST00000329082 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
RGMA-201ENST00000329082 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
RGMA-201ENST00000329082 EEA1Q15075 1411 aa13.17□□□□□ -0.3
RGMA-201ENST00000329082 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
RGMA-201ENST00000329082 TPM3P06753 285 aa13.16□□□□□ -0.3
RGMA-201ENST00000329082 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
RGMA-201ENST00000329082 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
RGMA-201ENST00000329082 RWDD1Q9H446 243 aaPredicted RBP13.15□□□□□ -0.3
RGMA-201ENST00000329082 GPS2Q13227 327 aa13.14□□□□□ -0.31
RGMA-201ENST00000329082 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
RGMA-201ENST00000329082 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
RGMA-201ENST00000329082 POGKQ9P215 609 aa13.12□□□□□ -0.31
RGMA-201ENST00000329082 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
RGMA-201ENST00000329082 PRM3Q9NNZ6 103 aa13.11□□□□□ -0.31
RGMA-201ENST00000329082 APBB1O00213 710 aa13.11□□□□□ -0.31
RGMA-201ENST00000329082 KTN1Q86UP2 1357 aaKnown RBP13.11□□□□□ -0.31
RGMA-201ENST00000329082 TMF1P82094 1093 aa13.11□□□□□ -0.31
RGMA-201ENST00000329082 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
RGMA-201ENST00000329082 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
RGMA-201ENST00000329082 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
RGMA-201ENST00000329082 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
RGMA-201ENST00000329082 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
RGMA-201ENST00000329082 ST18O60284 1047 aa13.09□□□□□ -0.31
RGMA-201ENST00000329082 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
RGMA-201ENST00000329082 CEP89Q96ST8 783 aa13.08□□□□□ -0.32
RGMA-201ENST00000329082 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
RGMA-201ENST00000329082 PDE4CQ08493 712 aa13.07□□□□□ -0.32
RGMA-201ENST00000329082 GSE1Q14687 1217 aa13.07□□□□□ -0.32
RGMA-201ENST00000329082 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
RGMA-201ENST00000329082 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
RGMA-201ENST00000329082 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
RGMA-201ENST00000329082 SKOR2Q2VWA4 1001 aaPredicted RBP13.05□□□□□ -0.32
RGMA-201ENST00000329082 CREBRFQ8IUR6 639 aa13.05□□□□□ -0.32
RGMA-201ENST00000329082 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
RGMA-201ENST00000329082 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
RGMA-201ENST00000329082 CFDP1Q9UEE9 299 aaPredicted RBP13.05□□□□□ -0.32
RGMA-201ENST00000329082 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
RGMA-201ENST00000329082 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
RGMA-201ENST00000329082 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
RGMA-201ENST00000329082 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
RGMA-201ENST00000329082 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
RGMA-201ENST00000329082 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
RGMA-201ENST00000329082 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
RGMA-201ENST00000329082 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
RGMA-201ENST00000329082 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
RGMA-201ENST00000329082 TPM1P09493 284 aa13.04□□□□□ -0.32
RGMA-201ENST00000329082 PATL2C9JE40 543 aaKnown RBP13.03□□□□□ -0.32
RGMA-201ENST00000329082 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
RGMA-201ENST00000329082 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
RGMA-201ENST00000329082 CHMP7Q8WUX9 453 aaPredicted RBP13.03□□□□□ -0.32
RGMA-201ENST00000329082 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
RGMA-201ENST00000329082 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
RGMA-201ENST00000329082 ATP6V1DQ9Y5K8 247 aa13.02□□□□□ -0.33
RGMA-201ENST00000329082 HMMRO75330 724 aa13.02□□□□□ -0.33
RGMA-201ENST00000329082 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
RGMA-201ENST00000329082 RALBP1Q15311 655 aa13□□□□□ -0.33
RGMA-201ENST00000329082 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
RGMA-201ENST00000329082 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
RGMA-201ENST00000329082 KCNH8Q96L42 1107 aa12.99□□□□□ -0.33
RGMA-201ENST00000329082 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
RGMA-201ENST00000329082 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
RGMA-201ENST00000329082 BECN2A8MW95 431 aa12.99□□□□□ -0.33
RGMA-201ENST00000329082 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
RGMA-201ENST00000329082 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
RGMA-201ENST00000329082 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
RGMA-201ENST00000329082 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
RGMA-201ENST00000329082 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
RGMA-201ENST00000329082 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
RGMA-201ENST00000329082 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
RGMA-201ENST00000329082 KANK1Q14678 1352 aa12.97□□□□□ -0.33
RGMA-201ENST00000329082 TNIKQ9UKE5 1360 aa12.97□□□□□ -0.33
RGMA-201ENST00000329082 H3BQV1 296 aa12.97□□□□□ -0.33
RGMA-201ENST00000329082 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
RGMA-201ENST00000329082 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
RGMA-201ENST00000329082 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
RGMA-201ENST00000329082 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
RGMA-201ENST00000329082 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
RGMA-201ENST00000329082 GORABQ5T7V8 394 aa12.96□□□□□ -0.33
RGMA-201ENST00000329082 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.34
RGMA-201ENST00000329082 APPP05067 770 aa12.96□□□□□ -0.34
RGMA-201ENST00000329082 FAM43AQ8N2R8 423 aa12.96□□□□□ -0.34
RGMA-201ENST00000329082 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.34
RGMA-201ENST00000329082 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
RGMA-201ENST00000329082 TPM2P07951 284 aa12.95□□□□□ -0.34
RGMA-201ENST00000329082 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
RGMA-201ENST00000329082 AK7Q96M32 723 aa12.94□□□□□ -0.34
RGMA-201ENST00000329082 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
RGMA-201ENST00000329082 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
RGMA-201ENST00000329082 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
RGMA-201ENST00000329082 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
RGMA-201ENST00000329082 SPAG9O60271 1321 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms