RNA–Protein interactions for RNA: ENST00000328257.12

PPME1-201, Transcript of protein phosphatase methylesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPME1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-201ENST00000328257 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
PPME1-201ENST00000328257 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
PPME1-201ENST00000328257 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
PPME1-201ENST00000328257 ZNF830Q96NB3 372 aaPredicted RBP16.84■□□□□ 0.29
PPME1-201ENST00000328257 TMEM51Q9NW97 253 aa16.84■□□□□ 0.29
PPME1-201ENST00000328257 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
PPME1-201ENST00000328257 MAP7D2Q96T17 732 aa16.81■□□□□ 0.28
PPME1-201ENST00000328257 POGKQ9P215 609 aa16.81■□□□□ 0.28
PPME1-201ENST00000328257 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
PPME1-201ENST00000328257 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
PPME1-201ENST00000328257 MS4A1P11836 297 aa16.8■□□□□ 0.28
PPME1-201ENST00000328257 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
PPME1-201ENST00000328257 UTP14CQ5TAP6 766 aaKnown RBP16.79■□□□□ 0.28
PPME1-201ENST00000328257 VGLL3A8MV65 326 aa16.78■□□□□ 0.28
PPME1-201ENST00000328257 SECISBP2LQ93073 1101 aaKnown RBP16.78■□□□□ 0.28
PPME1-201ENST00000328257 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.28
PPME1-201ENST00000328257 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
PPME1-201ENST00000328257 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
PPME1-201ENST00000328257 CHRM1P11229 460 aaPredicted RBP16.76■□□□□ 0.27
PPME1-201ENST00000328257 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
PPME1-201ENST00000328257 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
PPME1-201ENST00000328257 ESPNB1AK53 854 aa16.75■□□□□ 0.27
PPME1-201ENST00000328257 DMTNQ08495 405 aa16.74■□□□□ 0.27
PPME1-201ENST00000328257 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
PPME1-201ENST00000328257 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
PPME1-201ENST00000328257 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
PPME1-201ENST00000328257 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
PPME1-201ENST00000328257 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
PPME1-201ENST00000328257 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
PPME1-201ENST00000328257 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
PPME1-201ENST00000328257 RNF123Q5XPI4 1314 aa16.71■□□□□ 0.27
PPME1-201ENST00000328257 TNNT2P45379 298 aaPredicted RBP16.7■□□□□ 0.26
PPME1-201ENST00000328257 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
PPME1-201ENST00000328257 PANK2Q9BZ23 570 aa16.69■□□□□ 0.26
PPME1-201ENST00000328257 FAM13BQ9NYF5 915 aa16.68■□□□□ 0.26
PPME1-201ENST00000328257 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
PPME1-201ENST00000328257 RIPK4P57078 832 aa16.67■□□□□ 0.26
PPME1-201ENST00000328257 ERBB4Q15303 1308 aa16.66■□□□□ 0.26
PPME1-201ENST00000328257 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
PPME1-201ENST00000328257 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
PPME1-201ENST00000328257 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
PPME1-201ENST00000328257 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
PPME1-201ENST00000328257 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
PPME1-201ENST00000328257 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
PPME1-201ENST00000328257 KIF20AO95235 890 aa16.63■□□□□ 0.25
PPME1-201ENST00000328257 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
PPME1-201ENST00000328257 CUX1P39880 1505 aa16.63■□□□□ 0.25
PPME1-201ENST00000328257 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
PPME1-201ENST00000328257 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
PPME1-201ENST00000328257 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
PPME1-201ENST00000328257 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
PPME1-201ENST00000328257 MYH16Q9H6N6 1097 aa16.6■□□□□ 0.25
PPME1-201ENST00000328257 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
PPME1-201ENST00000328257 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
PPME1-201ENST00000328257 TERF1P54274 439 aa16.6■□□□□ 0.25
PPME1-201ENST00000328257 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
PPME1-201ENST00000328257 ARID3AQ99856 593 aa16.59■□□□□ 0.25
PPME1-201ENST00000328257 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
PPME1-201ENST00000328257 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
PPME1-201ENST00000328257 TRIM44Q96DX7 344 aaPredicted RBP16.59■□□□□ 0.25
PPME1-201ENST00000328257 RGS22Q8NE09 1264 aa16.58■□□□□ 0.25
PPME1-201ENST00000328257 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
PPME1-201ENST00000328257 SOGA1O94964 1423 aa16.58■□□□□ 0.24
PPME1-201ENST00000328257 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
PPME1-201ENST00000328257 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
PPME1-201ENST00000328257 IRX3P78415 501 aaPredicted RBP16.56■□□□□ 0.24
PPME1-201ENST00000328257 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.244e-7■■■■□ 22.3
PPME1-201ENST00000328257 MRE11P49959 708 aa16.55■□□□□ 0.24
PPME1-201ENST00000328257 DNTTIP2Q5QJE6 756 aaKnown RBP16.55■□□□□ 0.24
PPME1-201ENST00000328257 GTPBP4Q9BZE4 634 aaKnown RBP16.55■□□□□ 0.24
PPME1-201ENST00000328257 LETM1O95202 739 aaPredicted RBP16.54■□□□□ 0.24
PPME1-201ENST00000328257 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
PPME1-201ENST00000328257 OFD1O75665 1012 aa16.53■□□□□ 0.24
PPME1-201ENST00000328257 TAF3Q5VWG9 929 aa16.53■□□□□ 0.24
PPME1-201ENST00000328257 CLIP1P30622 1438 aa16.53■□□□□ 0.24
PPME1-201ENST00000328257 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
PPME1-201ENST00000328257 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
PPME1-201ENST00000328257 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
PPME1-201ENST00000328257 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.52■□□□□ 0.23
PPME1-201ENST00000328257 MRS2Q9HD23 443 aa16.52■□□□□ 0.23
PPME1-201ENST00000328257 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
PPME1-201ENST00000328257 CCDC94Q9BW85 323 aaPredicted RBP16.5■□□□□ 0.23
PPME1-201ENST00000328257 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
PPME1-201ENST00000328257 ZBTB22O15209 634 aa16.48■□□□□ 0.23
PPME1-201ENST00000328257 GZF1Q9H116 711 aaPredicted RBP16.47■□□□□ 0.23
PPME1-201ENST00000328257 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
PPME1-201ENST00000328257 E9PSI1 815 aa16.47■□□□□ 0.23
PPME1-201ENST00000328257 CNPY4Q8N129 248 aa16.46■□□□□ 0.23
PPME1-201ENST00000328257 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
PPME1-201ENST00000328257 GRPEL1Q9HAV7 217 aa16.46■□□□□ 0.23
PPME1-201ENST00000328257 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
PPME1-201ENST00000328257 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
PPME1-201ENST00000328257 KCNG1Q9UIX4 513 aa16.44■□□□□ 0.22
PPME1-201ENST00000328257 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
PPME1-201ENST00000328257 CHD1O14646 1710 aa16.44■□□□□ 0.22
PPME1-201ENST00000328257 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
PPME1-201ENST00000328257 UQCRHLA0A096LP55 91 aa16.43■□□□□ 0.22
PPME1-201ENST00000328257 DYNC1I1O14576 645 aa16.43■□□□□ 0.22
PPME1-201ENST00000328257 UQCRHP07919 91 aa16.43■□□□□ 0.22
PPME1-201ENST00000328257 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1061 ms