RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.37
PCM1-202ENST00000327578 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.37
PCM1-202ENST00000327578 CLIP1P30622 1438 aa17.33■□□□□ 0.36
PCM1-202ENST00000327578 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.36
PCM1-202ENST00000327578 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
PCM1-202ENST00000327578 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
PCM1-202ENST00000327578 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
PCM1-202ENST00000327578 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
PCM1-202ENST00000327578 PHF14O94880 888 aa17.29■□□□□ 0.36
PCM1-202ENST00000327578 POGKQ9P215 609 aa17.29■□□□□ 0.36
PCM1-202ENST00000327578 CSPP1Q1MSJ5 1256 aa17.28■□□□□ 0.36
PCM1-202ENST00000327578 IPO9Q96P70 1041 aaKnown RBP17.28■□□□□ 0.36
PCM1-202ENST00000327578 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
PCM1-202ENST00000327578 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
PCM1-202ENST00000327578 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.36
PCM1-202ENST00000327578 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
PCM1-202ENST00000327578 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
PCM1-202ENST00000327578 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
PCM1-202ENST00000327578 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
PCM1-202ENST00000327578 TPM3P06753 285 aa17.24■□□□□ 0.35
PCM1-202ENST00000327578 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
PCM1-202ENST00000327578 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
PCM1-202ENST00000327578 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
PCM1-202ENST00000327578 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
PCM1-202ENST00000327578 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
PCM1-202ENST00000327578 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
PCM1-202ENST00000327578 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
PCM1-202ENST00000327578 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
PCM1-202ENST00000327578 SOX12O15370 315 aa17.2■□□□□ 0.34
PCM1-202ENST00000327578 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
PCM1-202ENST00000327578 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
PCM1-202ENST00000327578 CCDC34Q96HJ3 373 aa17.2■□□□□ 0.34
PCM1-202ENST00000327578 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
PCM1-202ENST00000327578 TMF1P82094 1093 aa17.2■□□□□ 0.34
PCM1-202ENST00000327578 NOL8Q76FK4 1167 aaKnown RBP17.2■□□□□ 0.34
PCM1-202ENST00000327578 TSHZ2Q9NRE2 1034 aa17.2■□□□□ 0.34
PCM1-202ENST00000327578 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
PCM1-202ENST00000327578 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
PCM1-202ENST00000327578 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
PCM1-202ENST00000327578 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
PCM1-202ENST00000327578 PES1O00541 588 aaKnown RBP17.17■□□□□ 0.34
PCM1-202ENST00000327578 GPS2Q13227 327 aa17.17■□□□□ 0.34
PCM1-202ENST00000327578 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
PCM1-202ENST00000327578 GPATCH3Q96I76 525 aa17.16■□□□□ 0.34
PCM1-202ENST00000327578 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
PCM1-202ENST00000327578 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
PCM1-202ENST00000327578 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
PCM1-202ENST00000327578 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
PCM1-202ENST00000327578 TPD52L1Q16890 204 aaPredicted RBP17.14■□□□□ 0.34
PCM1-202ENST00000327578 ZNF592Q92610 1267 aa17.14■□□□□ 0.34
PCM1-202ENST00000327578 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
PCM1-202ENST00000327578 TSR1Q2NL82 804 aaKnown RBP17.13■□□□□ 0.33
PCM1-202ENST00000327578 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
PCM1-202ENST00000327578 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
PCM1-202ENST00000327578 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
PCM1-202ENST00000327578 SRPK2P78362 688 aaKnown RBP17.11■□□□□ 0.33
PCM1-202ENST00000327578 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
PCM1-202ENST00000327578 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
PCM1-202ENST00000327578 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
PCM1-202ENST00000327578 ST18O60284 1047 aa17.1■□□□□ 0.33
PCM1-202ENST00000327578 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
PCM1-202ENST00000327578 GSE1Q14687 1217 aa17.1■□□□□ 0.33
PCM1-202ENST00000327578 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
PCM1-202ENST00000327578 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
PCM1-202ENST00000327578 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
PCM1-202ENST00000327578 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.33
PCM1-202ENST00000327578 GORABQ5T7V8 394 aa17.08■□□□□ 0.33
PCM1-202ENST00000327578 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.33
PCM1-202ENST00000327578 CHMP3Q9Y3E7 222 aa17.08■□□□□ 0.33
PCM1-202ENST00000327578 RRP12Q5JTH9 1297 aaKnown RBP17.08■□□□□ 0.32
PCM1-202ENST00000327578 TAF7LQ5H9L4 462 aa17.07■□□□□ 0.32
PCM1-202ENST00000327578 H3BQV1 296 aa17.06■□□□□ 0.32
PCM1-202ENST00000327578 IFFO2Q5TF58 517 aa17.06■□□□□ 0.32
PCM1-202ENST00000327578 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
PCM1-202ENST00000327578 TPM1P09493 284 aa17.04■□□□□ 0.32
PCM1-202ENST00000327578 SAFB2Q14151 953 aaKnown RBP eCLIP17.03■□□□□ 0.32
PCM1-202ENST00000327578 NOM1Q5C9Z4 860 aaKnown RBP17.03■□□□□ 0.32
PCM1-202ENST00000327578 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
PCM1-202ENST00000327578 ZNF330Q9Y3S2 320 aaPredicted RBP17.03■□□□□ 0.32
PCM1-202ENST00000327578 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
PCM1-202ENST00000327578 TPM2P07951 284 aa17.03■□□□□ 0.32
PCM1-202ENST00000327578 BECN2A8MW95 431 aa17.02■□□□□ 0.32
PCM1-202ENST00000327578 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
PCM1-202ENST00000327578 APPP05067 770 aa17.01■□□□□ 0.31
PCM1-202ENST00000327578 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
PCM1-202ENST00000327578 MARCH6O60337 910 aa17.01■□□□□ 0.31
PCM1-202ENST00000327578 WWC1Q8IX03 1113 aa17■□□□□ 0.31
PCM1-202ENST00000327578 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
PCM1-202ENST00000327578 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
PCM1-202ENST00000327578 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■■■■□ 23.1
PCM1-202ENST00000327578 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
PCM1-202ENST00000327578 FAM184AQ8NB25 1140 aa16.99■□□□□ 0.31
PCM1-202ENST00000327578 KIF3AQ9Y496 699 aa16.98■□□□□ 0.31
PCM1-202ENST00000327578 HOMER1Q86YM7 354 aa16.98■□□□□ 0.31
PCM1-202ENST00000327578 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
PCM1-202ENST00000327578 HMMRO75330 724 aa16.98■□□□□ 0.31
PCM1-202ENST00000327578 BCL11BQ9C0K0 894 aaPredicted RBP16.98■□□□□ 0.31
PCM1-202ENST00000327578 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
PCM1-202ENST00000327578 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
PCM1-202ENST00000327578 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms