RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 FAM9BQ8IZU0 186 aa18.13■□□□□ 0.49
LIN28A-202ENST00000326279 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
LIN28A-202ENST00000326279 WASHC2CQ9Y4E1 1318 aa18.12■□□□□ 0.49
LIN28A-202ENST00000326279 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
LIN28A-202ENST00000326279 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
LIN28A-202ENST00000326279 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
LIN28A-202ENST00000326279 UACAQ9BZF9 1416 aa18.09■□□□□ 0.49
LIN28A-202ENST00000326279 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
LIN28A-202ENST00000326279 STK26Q9P289 416 aa18.08■□□□□ 0.49
LIN28A-202ENST00000326279 WDR62O43379 1518 aa18.08■□□□□ 0.48
LIN28A-202ENST00000326279 TMC1Q8TDI8 760 aa18.08■□□□□ 0.48
LIN28A-202ENST00000326279 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.48
LIN28A-202ENST00000326279 FYCO1Q9BQS8 1478 aa18.08■□□□□ 0.48
LIN28A-202ENST00000326279 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
LIN28A-202ENST00000326279 PCF11O94913 1555 aaKnown RBP18.06■□□□□ 0.48
LIN28A-202ENST00000326279 CUL7Q14999 1698 aa18.05■□□□□ 0.48
LIN28A-202ENST00000326279 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
LIN28A-202ENST00000326279 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
LIN28A-202ENST00000326279 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
LIN28A-202ENST00000326279 KIF15Q9NS87 1388 aa18.01■□□□□ 0.47
LIN28A-202ENST00000326279 KANK1Q14678 1352 aa18.01■□□□□ 0.47
LIN28A-202ENST00000326279 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
LIN28A-202ENST00000326279 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
LIN28A-202ENST00000326279 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
LIN28A-202ENST00000326279 ARHGAP5Q13017 1502 aa17.99■□□□□ 0.47
LIN28A-202ENST00000326279 TIAM1Q13009 1591 aa17.99■□□□□ 0.47
LIN28A-202ENST00000326279 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
LIN28A-202ENST00000326279 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
LIN28A-202ENST00000326279 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
LIN28A-202ENST00000326279 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
LIN28A-202ENST00000326279 HSPA5P11021 654 aaKnown RBP17.95■□□□□ 0.46
LIN28A-202ENST00000326279 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
LIN28A-202ENST00000326279 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
LIN28A-202ENST00000326279 FKBP8Q14318 412 aa17.93■□□□□ 0.46
LIN28A-202ENST00000326279 POGKQ9P215 609 aa17.92■□□□□ 0.46
LIN28A-202ENST00000326279 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
LIN28A-202ENST00000326279 ANKRD50Q9ULJ7 1429 aa17.91■□□□□ 0.46
LIN28A-202ENST00000326279 ATP10BO94823 1461 aa17.91■□□□□ 0.46
LIN28A-202ENST00000326279 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
LIN28A-202ENST00000326279 IRX6P78412 446 aaPredicted RBP17.89■□□□□ 0.45
LIN28A-202ENST00000326279 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
LIN28A-202ENST00000326279 NUP153P49790 1475 aaKnown RBP17.88■□□□□ 0.45
LIN28A-202ENST00000326279 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
LIN28A-202ENST00000326279 SOX12O15370 315 aa17.88■□□□□ 0.45
LIN28A-202ENST00000326279 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
LIN28A-202ENST00000326279 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
LIN28A-202ENST00000326279 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
LIN28A-202ENST00000326279 TRAK1Q9UPV9 953 aa17.86■□□□□ 0.45
LIN28A-202ENST00000326279 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
LIN28A-202ENST00000326279 DISP1Q96F81 1524 aa17.85■□□□□ 0.45
LIN28A-202ENST00000326279 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
LIN28A-202ENST00000326279 NUP160Q12769 1436 aa17.84■□□□□ 0.45
LIN28A-202ENST00000326279 CD109Q6YHK3 1445 aa17.84■□□□□ 0.45
LIN28A-202ENST00000326279 BCL11AQ9H165 835 aa17.83■□□□□ 0.45
LIN28A-202ENST00000326279 C9orf84Q5VXU9 1444 aa17.83■□□□□ 0.44
LIN28A-202ENST00000326279 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
LIN28A-202ENST00000326279 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
LIN28A-202ENST00000326279 CEP170Q5SW79 1584 aa17.81■□□□□ 0.44
LIN28A-202ENST00000326279 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
LIN28A-202ENST00000326279 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
LIN28A-202ENST00000326279 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
LIN28A-202ENST00000326279 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
LIN28A-202ENST00000326279 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
LIN28A-202ENST00000326279 TMEM132EQ6IEE7 984 aa17.78■□□□□ 0.44
LIN28A-202ENST00000326279 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
LIN28A-202ENST00000326279 DAPK1P53355 1430 aa17.78■□□□□ 0.44
LIN28A-202ENST00000326279 ASXL2Q76L83 1435 aa17.77■□□□□ 0.44
LIN28A-202ENST00000326279 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
LIN28A-202ENST00000326279 ABCC5O15440 1437 aa17.76■□□□□ 0.43
LIN28A-202ENST00000326279 NAIPQ13075 1403 aa17.75■□□□□ 0.43
LIN28A-202ENST00000326279 KIAA0556O60303 1618 aa17.74■□□□□ 0.43
LIN28A-202ENST00000326279 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
LIN28A-202ENST00000326279 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
LIN28A-202ENST00000326279 GPATCH8Q9UKJ3 1502 aaKnown RBP17.73■□□□□ 0.43
LIN28A-202ENST00000326279 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
LIN28A-202ENST00000326279 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
LIN28A-202ENST00000326279 FBXO31Q5XUX0 539 aaPredicted RBP17.71■□□□□ 0.43
LIN28A-202ENST00000326279 CAMSAP2Q08AD1 1489 aa17.71■□□□□ 0.43
LIN28A-202ENST00000326279 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
LIN28A-202ENST00000326279 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
LIN28A-202ENST00000326279 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
LIN28A-202ENST00000326279 NBPF8Q3BBV2 869 aa17.7■□□□□ 0.42
LIN28A-202ENST00000326279 RAPGEF6Q8TEU7 1601 aa17.69■□□□□ 0.42
LIN28A-202ENST00000326279 CTTNBP2Q8WZ74 1663 aa17.69■□□□□ 0.42
LIN28A-202ENST00000326279 TMF1P82094 1093 aa17.69■□□□□ 0.42
LIN28A-202ENST00000326279 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
LIN28A-202ENST00000326279 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
LIN28A-202ENST00000326279 HFM1A2PYH4 1435 aa17.67■□□□□ 0.42
LIN28A-202ENST00000326279 FANCAO15360 1455 aa17.66■□□□□ 0.42
LIN28A-202ENST00000326279 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
LIN28A-202ENST00000326279 MINK1Q8N4C8 1332 aaPredicted RBP17.65■□□□□ 0.42
LIN28A-202ENST00000326279 NCOA1Q15788 1441 aa17.64■□□□□ 0.41
LIN28A-202ENST00000326279 A0A0G2JS52 829 aa17.63■□□□□ 0.41
LIN28A-202ENST00000326279 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
LIN28A-202ENST00000326279 PTPN23Q9H3S7 1636 aa17.63■□□□□ 0.41
LIN28A-202ENST00000326279 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.41
LIN28A-202ENST00000326279 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
LIN28A-202ENST00000326279 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
LIN28A-202ENST00000326279 NEFMP07197 916 aa17.61■□□□□ 0.41
LIN28A-202ENST00000326279 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms